Contig 001384:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031C03+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF031C03+          GACAAAATTNAGAATCNAGACAAAATTGATATGCTGCAACGGGCAGAAGAGAAATATTAT
                      ____________________________________________________________
consensus             GACAAAATTNAGAATCNAGACAAAATTGATATGCTGCAACGGGCAGAAGAGAAATATTAT
 
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rJMSF031C03+          CAGAACAAAAATCCTGAGAAGCAGGTAAATAAACTTGACAAAAATGCAATACCCGAAACA
                      ____________________________________________________________
consensus             CAGAACAAAAATCCTGAGAAGCAGGTAAATAAACTTGACAAAAATGCAATACCCGAAACA
 
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rJMSF031C03+          TTAAGAGAGACTGGCAGACAAAGATTGTTAAACACATTAAAACAAAACGAGAAGCGGTTC
                      ____________________________________________________________
consensus             TTAAGAGAGACTGGCAGACAAAGATTGTTAAACACATTAAAACAAAACGAGAAGCGGTTC
 
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rJMSF031C03+          TCTGATTTAAGGATGAGCTTCGAAGATTCTGCCTCGATTCTTGAAAATGAATGTTACAAG
rJMSF026O07+            TGATTTAAGGATGAGCTTCGAAGATTCTGCCTCGATTCTTGAAAATGAATGTTACAAG
                      ____________________________________________________________
consensus             TCTGATTTAAGGATGAGCTTCGAAGATTCTGCCTCGATTCTTGAAAATGAATGTTACAAG
 
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rJMSF031C03+          AAGTACAGTAAAAGCGGGAAGTCCTTTTATTTATCTCAAATGGCAAGTACAGTAAGGTGG
rJMSF026O07+          AAGTACAGTAAAAGCGGGAAGTCCTTTTATTTATCTCAAATGGCAAGTACAGTAAGGTGG
                      ____________________________________________________________
consensus             AAGTACAGTAAAAGCGGGAAGTCCTTTTATTTATCTCAAATGGCAAGTACAGTAAGGTGG
 
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rJMSF031C03+          CTCTCAACAGTAGACCCAACCGAACTAACAAATAAGCTCGGCTGTGCTCCTGATCCTCCC
rJMSF026O07+          CTCTCAACAGTAGACCCAACCGAACTAACAAATAAGCTCGGCTGTGCTCCTGATCCTCCC
                      ____________________________________________________________
consensus             CTCTCAACAGTAGACCCAACCGAACTAACAAATAAGCTCGGCTGTGCTCCTGATCCTCCC
 
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rJMSF031C03+          AAGGATNTACAACAACCTTCAGAATCACTGACTTCATCAATCACATTATCAGCAGGACAG
rJMSF026O07+          AAGGATNTACAACAACCTTCAGAATCACTGACTTCATCAATCACATTATCAGCAGGACAG
                      ____________________________________________________________
consensus             AAGGATNTACAACAACCTTCAGAATCACTGACTTCATCAATCACATTATCAGCAGGACAG
 
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rJMSF031C03+          AATAACGAGAAAACCAACAGCGTTGTTTTAGAAACAGAAGCAGCAGCTGAAAACGTCTCC
rJMSF026O07+          AATAACGNGAAAACCAACAGCGTTGTTTTAGAAACAGAAGCAGCAGCTGAAAACGTCTCC
                      ____________________________________________________________
consensus             AATAACGAGAAAACCAACAGCGTTGTTTTAGAAACAGAAGCAGCAGCTGAAAACGTCTCC
 
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rJMSF031C03+          CCTGCTACAACATTGCCACCAATCCCATCTTTCTCCGAGTATATTAACAGTAGAAAAGTG
rJMSF026O07+          CCTGCTACAACATTGCCACCAATCCCATCTTTCTCCGAGTATATTAACAGTAGAAAAGTG
                      ____________________________________________________________
consensus             CCTGCTACAACATTGCCACCAATCCCATCTTTCTCCGAGTATATTAACAGTAGAAAAGTG
 
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rJMSF031C03+          AAGAGCCNCCATGAATCCAAATCAAAAAAGCGTTCACCTGATATGTCCCAAAAGAATATA
rJMSF026O07+          AAGAGCCNCCATGAATCCAAATCAAAAAAGCGTTCACCTGATATGTCCCAAAAGAATATA
                      ____________________________________________________________
consensus             AAGAGCCNCCATGAATCCAAATCAAAAAAGCGTTCACCTGATATGTCCCAAAAGAATATA
 
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rJMSF031C03+          CAGAAGAAAATGCGATCTTAATTTAGTGCCTTTTTTTTTTAACCTCCTGTATTTGGCTGC
rJMSF026O07+          CAGAAGAAAATGCGATCTTAATTTAGNGCCTTTTTTTTTTAACCTCCTGTATTTGGCTGC
                      ____________________________________________________________
consensus             CAGAAGAAAATGCGATCTTAATTTAGTGCCTTTTTTTTTTAACCTCCTGTATTTGGCTGC
 
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rJMSF031C03+          AACTGGCAATGTTTGCAATATGATTGCTTAGAATT                         
rJMSF026O07+          AACTGGCAATGTTTGCAATATGATTGCTTAGAATTTGTTTCCTAGTTATTTTGTTCTTAA
                      ____________________________________________________________
consensus             AACTGGCAATGTTTGCAATATGATTGCTTAGAATTTGTTTCCTAGTTATTTTGTTCTTAA
 
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rJMSF026O07+          TGTAACCTGTCATTCATTTTGAAAGTCCTCATGTCCTTCTCCATGCCATTTTTTATTTTT
                      ____________________________________________________________
consensus             TGTAACCTGTCATTCATTTTGAAAGTCCTCATGTCCTTCTCCATGCCATTTTTTATTTTT
 
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rJMSF026O07+          CTTTTAACTATAAATATTATTCTTCTAACTACCTTCTTTCTCAAGACTTTGATANGAGAA
                      ____________________________________________________________
consensus             CTTTTAACTATAAATATTATTCTTCTAACTACCTTCTTTCTCAAGACTTTGATANGAGAA