Contig 001383:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026N01Sequence616003552 (4)ref|XP_006360989.1|1e-50PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum tubero720001383 (2)ref|XP_009619439.1|328PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana tomentosiformis]
JMSF047E13Sequence699003552 (4)ref|XP_006360989.1|7e-82PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum tubero413001383 (2)ref|XP_006360989.1|5e-20PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum tubero

Alignment

This contig is upended


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rJMSF026N01+                                                                     G
                      ____________________________________________________________
consensus                                                                        G
 
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rJMSF026N01+          TTCAACAATTCAACNTGATGAAAGAAGACGAATGCGGATGGCTTTTGATGTGGCAAAGGG
                      ____________________________________________________________
consensus             TTCAACAATTCAACNTGATGAAAGAAGACGAATGCGGATGGCTTTTGATGTGGCAAAGGG
 
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rJMSF026N01+          AATGAACTATTTGCATACAAGCAATCCTATGATTGTGCATCGAGATTTGAAGACTCCAAA
                      ____________________________________________________________
consensus             AATGAACTATTTGCATACAAGCAATCCTATGATTGTGCATCGAGATTTGAAGACTCCAAA
 
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rJMSF026N01+          TCTACTTGTTGACAAAAATTGGGTTGTGAAGGTTTGTGATTTTGGGATGTCTCGAATGAA
                      ____________________________________________________________
consensus             TCTACTTGTTGACAAAAATTGGGTTGTGAAGGTTTGTGATTTTGGGATGTCTCGAATGAA
 
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rJMSF026N01+          GCACCATACATTTCTCTCCTCAAAATCTACAGCTGGGACAGCTGAATGGATGGCACCAGA
                      ____________________________________________________________
consensus             GCACCATACATTTCTCTCCTCAAAATCTACAGCTGGGACAGCTGAATGGATGGCACCAGA
 
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rJMSF047E13+                                  CGAAAAGTNTGANGTGTNCAGTNTTGGNGTANTTTT
rJMSF026N01+          AGTTCTGAGGAATGAACCATCGAACGAAAAGTCTGATGTGTACAGTTTTGGTGTAATTTT
                      ____________________________________________________________
consensus             AGTTCTGAGGAATGAACCATCGAACGAAAAGTCTGATGTGTACAGTTTTGGTGTAATTTT
 
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rJMSF047E13+          ATGGGAGTTAGCCNCTCTGCAAGTACCTTGGTCAGGGATGAACTCAATGCAGGTTGTTGG
rJMSF026N01+          ATGGGAGTTAGCCACTCTGCAAGTACCTTGGTCAGGGATGAACTCAATGCAGGTTGTTGG
                      ____________________________________________________________
consensus             ATGGGAGTTAGCCACTCTGCAAGTACCTTGGTCAGGGATGAACTCAATGCAGGTTGTTGG
 
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rJMSF047E13+          AGNNGTAGGTTNTCAGGGTAGNCGACTCCGCATTNCCTNTGAGGTTGATCCCACGGTTGC
rJMSF026N01+          AGCTGTAGGTTTTCAGGGTAGACGACTCAGCATTCCCTCTGAGGTTGATCCCACGGTTGC
                      ____________________________________________________________
consensus             AGCTGTAGGTTTTCAGGGTAGACGACTCCGCATTCCCTCTGAGGTTGATCCCACGGTTGC
 
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rJMSF047E13+          AGAGNTTATAAGTGACTGCTGGAAACAAGATCCACAGGCACGACCTTCGTTTGCACAGAT
rJMSF026N01+          AGAGATTATAAGTGACTGCTGGAAACAAGATCCACAGGCACGACCTTCGTTTGCACAGAT
                      ____________________________________________________________
consensus             AGAGATTATAAGTGACTGCTGGAAACAAGATCCACAGGCACGACCTTCGTTTGCACAGAT
 
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rJMSF047E13+          CATAAACTGGNTCAAGCNTTGTCTTCAGCATCTNNACATCAAGGAAGCAGAAACTCGTNC
rJMSF026N01+          CATAAACTGGCTCAAGACTTGTCTTCAGCATCTAAACATCAAGGAAGCAGAAACTCGTAC
                      ____________________________________________________________
consensus             CATAAACTGGCTCAAGCCTTGTCTTCAGCATCTAAACATCAAGGAAGCAGAAACTCGTAC
 
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rJMSF047E13+          ATATCAGCGCCAATNATAAAGAGGTTCTGTTTTTACAAACNCATAAAGTAGGAGCCAGCC
rJMSF026N01+          ATATCAGCGCCAATAATAAAGAGGTTATGTTTTTACAAACACATAAACTAGGAGCCAGCC
                      ____________________________________________________________
consensus             ATATCAGCGCCAATAATAAAGAGGTTCTGTTTTTACAAACACATAAAGTAGGAGCCAGCC
 
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rJMSF047E13+          AGCCAGCAAANAAACATNCAACATTCAACNAGNTGNTGGTGGAGTTGAAAGGTGTTAGGG
rJMSF026N01+          AGCCAGCAAAGAAACATTCAACATTCAACAAGATGGTGGTGGA-TTGAAAGGTGTTAGGG
                      ____________________________________________________________
consensus             AGCCAGCAAAGAAACATTCAACATTCAACAAGATGGTGGTGGAGTTGAAAGGTGTTAGGG
 
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rJMSF047E13+          TTCATTCGAAG                                                 
rJMSF026N01+          TTCATTCGAAGTGGGGACTCAACACCGCCAATTCATACACAACCAAGCCGCATTGTATCC
                      ____________________________________________________________
consensus             TTCATTCGAAGTGGGGACTCAACACCGCCAATTCATACACAACCAAGCCGCATTGTATCC