Contig 001382:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026M17Sequence639005114 (2)ref|XP_004249033.1|3e-101PREDICTED: mannan endo-1,4-beta-mannosidase 6 isoform X1 [Solanum lycopersicum]656001382 (2)ref|XP_009774303.1|1e-92PREDICTED: mannan endo-1,4-beta-mannosidase 6 isoform X3 [Nicotiana sylvestris]
JMSF034A20Sequence676005114 (2)ref|XP_004249033.1|9e-109PREDICTED: mannan endo-1,4-beta-mannosidase 6 isoform X1 [Solanum lycopersicum]620001382 (2)ref|XP_009774303.1|4e-88PREDICTED: mannan endo-1,4-beta-mannosidase 6 isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF034A20+                                                  ATGCCACACAAGTTGGAACA
rJMSF026M17+              TCAACGCCGAACCGGCTCAATTCAACCCCAACACNTATGCCACACAAGTTGGAACA
                      ____________________________________________________________
consensus                 TCAACGCCGAACCGGCTCAATTCAACCCCAACACNTATGCCACACAAGTTGGAACA
 
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rJMSF034A20+          GACTTCATCAGAAATCATATGGCTCTTGGAGTTGATTTTGCTTCTGCCCACATCTACCCA
rJMSF026M17+          GACTTCATCAGAAATCATATGGCTCTTGGAGTTGATTTTGCTTCTGCCCACATCTACCCA
                      ____________________________________________________________
consensus             GACTTCATCAGAAATCATATGGCTCTTGGAGTTGATTTTGCTTCTGCCCACATCTACCCA
 
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rJMSF034A20+          GACACTTGGATTTCACAGAACATAACAGATGCCCATGTGGAGTTCACCAAGACATGGATG
rJMSF026M17+          GACACTTGGATTTCACAGAACATAACAGATGCCCATGTGGAGTTCACCAAGACATGGATG
                      ____________________________________________________________
consensus             GACACTTGGATTTCACAGAACATAACAGATGCCCATGTGGAGTTCACCAAGACATGGATG
 
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rJMSF034A20+          CAATCCCACATCGAAGACGCCGAGAGCTACCTGGGAATGCCGATCATCTTCGCCGAGTTC
rJMSF026M17+          CAATCCCACATCGAAGACGCCGAGAGCTACCTGGGAATGCCGATCATCTTCGCCGAGTTC
                      ____________________________________________________________
consensus             CAATCCCACATCGAAGACGCCGAGAGCTACCTGGGAATGCCGATCATCTTCGCCGAGTTC
 
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rJMSF034A20+          GGCGTCTGCACGAAAGATCCCGGCTTCAACGCCACTTACAGAGACACCATTCTCAGCACC
rJMSF026M17+          GGCGTCTGCACGAAAGATCCCGGCTTCAACGCCACTTACAGAGACACCATTCTCAGCACC
                      ____________________________________________________________
consensus             GGCGTCTGCACGAAAGATCCCGGCTTCAACGCCACTTACAGAGACACCATTCTCAGCACC
 
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rJMSF034A20+          GTGTACAAGAGCATCTTGAACTCCACCAAGAAAGGCGGTGGGGGCGCCGGCGCCCTTCTG
rJMSF026M17+          GTGTACAAGAGCATCTTGAACTCCACCAAGAAAGGCGGTGGGGGCGCCGGCGCCCTTCTG
                      ____________________________________________________________
consensus             GTGTACAAGAGCATCTTGAACTCCACCAAGAAAGGCGGTGGGGGCGCCGGCGCCCTTCTG
 
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rJMSF034A20+          TGGCAGCTCTTCCCTGAAGGAACAGAGTACATGGACGATGGGTACGCAATAGTTCTCTCA
rJMSF026M17+          TGGCAGCTCTTCCCTGAAGGAACAGAGTACATGGACGATGGGTACGCAATAGTTCTCTCA
                      ____________________________________________________________
consensus             TGGCAGCTCTTCCCTGAAGGAACAGAGTACATGGACGATGGGTACGCAATAGTTCTCTCA
 
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rJMSF034A20+          AAATCTGCCTCCACATCGGACATTATCTCTCTGCATTCCAAGAGGCTCAGAGCTTTCAAC
rJMSF026M17+          AAATCTGCCTCCACATCGGACATTATCTCTCTGCATTCCAAGAGGCTCAGAGCTTTCAAC
                      ____________________________________________________________
consensus             AAATCTGCCTCCACATCGGACATTATCTCTCTGCATTCCAAGAGGCTCAGAGCTTTCAAC
 
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rJMSF034A20+          TCCCTGTGTTCATGGAAATGCCACTGGGGTTGCAAGAAGAAGCAGGTGCTGGATACTTTC
rJMSF026M17+          TCCCTGTGTTCATGGAAATGCCACTGGGGTTGCAAGAAGAAGCAGGTGCTGGATACTTTC
                      ____________________________________________________________
consensus             TCCCTGTGTTCATGGAAATGCCACTGGGGTTGCAAGAAGAAGCAGGTGCTGGATACTTTC
 
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rJMSF034A20+          CTTGGCCGTGATGAGCTTTAGAATCACTTATATACTGTAATGATTATCCACCATCATGGA
rJMSF026M17+          CTTGGCCGTGATGAGCTTTAGAATCACTTATATACTGTAATGATTATCCACCATCATGGA
                      ____________________________________________________________
consensus             CTTGGCCGTGATGAGCTTTAGAATCACTTATATACTGTAATGATTATCCACCATCATGGA
 
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rJMSF034A20+          TCATCTGTGATTAATACTGGGTTCATGTAATATGATCTGAACAATAATAAAGTCATATAT
rJMSF026M17+          TCATCTGTGATTAATACTGGGTTCATGTAATATGATCTGAACAATAATAAAGTCATATAT
                      ____________________________________________________________
consensus             TCATCTGTGATTAATACTGGGTTCATGTAATATGATCTGAACAATAATAAAGTCATATAT