Contig 001381:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030G11Sequence111001381 (5)gb|ADL63119.1|2e-08sucrose transporter 1x [Ipomoea batatas]
JMFN041C16Sequence643001381 (5)gb|ABF06446.1|1e-101putative sucrose transport protein SUT1 [Nicotiana langsdorffii x Nicotiana san
JMSF008B03Sequence344002190 (5)gb|ABF06450.1|6e-24putative sucrose transport protein SUT1 [Nicotiana langsdorffii x Nicotiana san736001381 (5)gb|ADL63120.1|4e-84sucrose transporter 2x [Ipomoea batatas]
JMSF018F15Sequence541002190 (5)gb|AAO13696.1|8e-65sucrose transporter [Solanum lycopersicum]681001381 (5)emb|CAQ58421.1|2e-50sucrose transporter [Nicotiana tabacum]
JMSF026M02Sequence534002190 (5)gb|AAO13696.1|5e-60sucrose transporter [Solanum lycopersicum]713001381 (5)gb|ADL63117.1|4e-79sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [

Alignment

This contig is upended


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JMFN041C16-                                       CTTGGCGCTAACTTTCGTGAAAGAGCAAGAGC
                      ____________________________________________________________
consensus                                         CTTGGCGCTAACTTTCGTGAAAGAGCAAGAGC
 
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JMFN041C16-           TGAAAGACGCCGCCGACGGCGGAGAGAGGCAGCTAAAGGGGAAGAAGGCGGTGCCGTTCT
                      ____________________________________________________________
consensus             TGAAAGACGCCGCCGACGGCGGAGAGAGGCAGCTAAAGGGGAAGAAGGCGGTGCCGTTCT
 
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JMFN041C16-           TCGGCGAAATCTTCGGCGCCTTGAAGGACCTCCCAAGGCCCATGTGGATTCTCCTGCTGG
                      ____________________________________________________________
consensus             TCGGCGAAATCTTCGGCGCCTTGAAGGACCTCCCAAGGCCCATGTGGATTCTCCTGCTGG
 
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JMFN041C16-           TCACCGCTCTCAACTGGATCGCGTGGTTCCCTTTCTTCCTCTACGACACCGACTGGATGG
                      ____________________________________________________________
consensus             TCACCGCTCTCAACTGGATCGCGTGGTTCCCTTTCTTCCTCTACGACACCGACTGGATGG
 
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JMFN041C16-           CCAAGGAGGTGTTCGGCGGCCAAGTCGGCGACAATCTCTACTCCAGAGGCGTCCATGCCG
JMFN030G11-                                                   CTCCAGAGGCGTCCATGCCG
rJMSF008B03+                                                  CTCCAGAGGCGTCCATGCCG
                      ____________________________________________________________
consensus             CCAAGGAGGTGTTCGGCGGCCAAGTCGGCGACAATCTCTACTCCAGAGGCGTCCATGCCG
 
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JMFN041C16-           GCGCGCTGGGGCTCATGCTCCAATCCGTGGTTTTGGGTTTCATGTCAATCGCGGTGGAGC
JMFN030G11-           GCGCGCTGGGGCTCATGCTCCAATCCGTGGTTTTGGGTTTCATGTCAATCGCGGTGGAGC
rJMSF008B03+          GCGCGCTGGGGCTCATGCTCCAATCCGTGGTTTTGGGTTTCATGTCAATCGCGGTGGAGC
rJMSF018F15+                                            GGGTTTCANGTCAATNGCGGTGGAGC
rJMSF026M02+                 GGGGCTCATGCTCCAATCCGTGGTTTTGGGTTTCATGTCAATCGCGGTGGAGC
                      ____________________________________________________________
consensus             GCGCGCTGGGGCTCATGCTCCAATCCGTGGTTTTGGGTTTCATGTCAATCGCGGTGGAGC
 
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JMFN041C16-           TCCTGGCGCGGCGCCTCGGCGGCGTCAAGAAGCTCTGGGGCGGCGTTAACTTCATCTTGG
JMFN030G11-           TCCTGGCGCGGCGCCTCGGCGGCGTCAAGAA                             
rJMSF008B03+          TCCTGGCGCGGCGCCTCGGCGGCGTCAAGAAGCTCTGGGGCGGCGTTAACTTCATCTTGG
rJMSF018F15+          TCCTGNCGCGGCGCCTCGGCGGCGTCAAGAAGCTCTGGGGCGGCGTTAACTTCATNTTGG
rJMSF026M02+          TCCTGGCGCGGCGCCTCGGCGGCGTCAAGAAGCTCTGGGGCGGCGTTAACTTCATCTTGG
                      ____________________________________________________________
consensus             TCCTGGCGCGGCGCCTCGGCGGCGTCAAGAAGCTCTGGGGCGGCGTTAACTTCATCTTGG
 
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JMFN041C16-           CGATTTGTTTGGGCATGATGGTTTTGGTCACCAAAATGGCGGAGCATACCCGCCGGATCG
rJMSF008B03+          CGATTTGTTTGGGCATGATGGTTTTGGTCACCAAAATGGCGGAGCATACCCGCCGGATCG
rJMSF018F15+          CGATTTGTTTGGGCANGATGGTATTGGTCACCAAAATGGCGGAGCATACCCGCCGGATCG
rJMSF026M02+          CGATTTGTTTGGGCATGATGGTTTTGGTCACCAAAATGGCGGAGCATACCCGCCGGATCG
                      ____________________________________________________________
consensus             CGATTTGTTTGGGCATGATGGTTTTGGTCACCAAAATGGCGGAGCATACCCGCCGGATCG
 
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JMFN041C16-           ACCCCAACGGCAACGTTCTCTCACCCACCTCCGGCGTTAAGGCCGGAGCCTTGCTTGTCT
rJMSF008B03+          ACCCCAACGGCAACGTTCTCTCACCCACCTCCGGCGTTAAGGCCGGAGCCTTGCTTGTCT
rJMSF018F15+          ACCCCAACGGCAACGTTCTCTCACCCACCTCCGGCGTTAAGGCCGGAGCCTTGCTTGTCT
rJMSF026M02+          ACCCCAACGGCAACGTTCTCTCACCCACCTCCGGCGTTAAGGCCGGAGCCTTGCTTGTCT
                      ____________________________________________________________
consensus             ACCCCAACGGCAACGTTCTCTCACCCACCTCCGGCGTTAAGGCCGGAGCCTTGCTTGTCT
 
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JMFN041C16-           TCTCCGTCCTCGGAATTCCTCTAGCCGTCACTTTTAGTATTCCGTTCGCTCTGGCATCCA
rJMSF008B03+          TCTCCGTCCTCGGAATTCCTCTAGCCGTCACTTTTAGTATTCCGTTCGCTCTGGCATCCA
rJMSF018F15+          TNTCCGTCCTCGGAATTCCTCTAGCCGTCACTTTTAGTATTCCGTTCGCTCTGGCATCCA
rJMSF026M02+          TCTCCGTCCTCGGAATTCCTCTAGCCGTCACTTTTAGTATTCCGTTCGCTCTGGCATCCA
                      ____________________________________________________________
consensus             TCTCCGTCCTCGGAATTCCTCTAGCCGTCACTTTTAGTATTCCGTTCGCTCTGGCATCCA
 
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JMFN041C16-           TCTTTTCCAGTAATGCCGGTGCTGGGCAAGGTCTCTCCTTAGGCGTCCTCAATCTTTCAA
rJMSF008B03+          TCTTTTCCAGTAATGCCGGTGCTGGGCAAGGTCTCTCCTTAGGCGTCCTCAATCTTTCAA
rJMSF018F15+          TCTTTTCCAGTAATGCCGGTGCTGGGCAAGGTCTCTCCTTAGGCGTCCTCAATCTTTCAA
rJMSF026M02+          TCTTTTCCAGTAATGCCGGTGCTGGGCAAGGTCTCTCCTTAGGCGTCCTCAATCTTTCAA
                      ____________________________________________________________
consensus             TCTTTTCCAGTAATGCCGGTGCTGGGCAAGGTCTCTCCTTAGGCGTCCTCAATCTTTCAA
 
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JMFN041C16-           TCGTCATACCG                                                 
rJMSF008B03+          TCGTCATACCGCAGATGTTCGTGTCGTTCTTGAGTGGGCCTTGGGATGCGGCGTTCGGCG
rJMSF018F15+          TCGTCATACCGCAGATGTTCGTGTCGTTCNTGAGTGGGCCTTGGGATGCGGCGTTCGGCG
rJMSF026M02+          TCGTCATACCGCAGATGTTCGTGTCGTTCTTGAGTGGGCCTTGGGATGCGGCGTTCGGCG
                      ____________________________________________________________
consensus             TCGTCATACCGCAGATGTTCGTGTCGTTCTTGAGTGGGCCTTGGGATGCGGCGTTCGGCG
 
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rJMSF008B03+          GTGGGAATTTGCCGGCGTTTGTGGTGGGAGCGGTGTCGGCGGCCTTGAGTGGGATATTCG
rJMSF018F15+          GTGGGAATTTGCCGGCGTTTGTGGTGGGAGCGGTGTCGGCGGCCTNGAGTGGGATATTCG
rJMSF026M02+          GTGGGAATTTGCCGGCGTTTGTGGTGGGAGCGGTGTCGGCGGCCTTGAGTGGGATATTCG
                      ____________________________________________________________
consensus             GTGGGAATTTGCCGGCGTTTGTGGTGGGAGCGGTGTCGGCGGCCTTGAGTGGGATATTCG
 
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rJMSF008B03+          CGATGACGTTGCTGCCGTCTCCGCCGCGTGATGCGAAGGTTGAGCTGTCCGGCGGTGGTT
rJMSF018F15+          CGATGACGTTGCTGCCGTCTCCGCCGCGTGATGCGAAGGTTGAGCTGTCCGGCGGTGGTT
rJMSF026M02+          CGATGACGTTGCTGCCGTCTCCGCCGCGTGATGCGAAGGTTGAGCTGTCCGGCGGTGGTT
                      ____________________________________________________________
consensus             CGATGACGTTGCTGCCGTCTCCGCCGCGTGATGCGAAGGTTGAGCTGTCCGGCGGTGGTT
 
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rJMSF008B03+          TCCACTGAAACACAAGTTTTCATAATCCTAATTATACGTATGCTGATGATGATATATATA
rJMSF018F15+          TCCACTGAAACACAAGTTTTCATAATCCTAATTATACGTATGCTGATGANGATATATATA
rJMSF026M02+          TCCACTGAAACACAAGTTTTCATAATCCTAATTATACGTATGCTGATGATGATATATATA
                      ____________________________________________________________
consensus             TCCACTGAAACACAAGTTTTCATAATCCTAATTATACGTATGCTGATGATGATATATATA
 
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rJMSF008B03+          TGTATGTATCTTTCTGAAGGCGTTGAAGGGCAATTAGGAAATGTGGGTCATGCATGTTTA
rJMSF018F15+          TGTATGTATCTTTCTGAAGGCGTTGAAGGGCAAATAGGAAATGTGGGTCATGCATGTTTA
rJMSF026M02+          TGTATGTATCTTTCTGAAGGCGTTGAAGGGCAAATAGGAAATGTGGGTCATGCATGTTTA
                      ____________________________________________________________
consensus             TGTATGTATCTTTCTGAAGGCGTTGAAGGGCAAATAGGAAATGTGGGTCATGCATGTTTA
 
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rJMSF008B03+          ATATACTGTTCCCATATTGGTCTCCACATTAACTCTCCACCTTAGTTGAGAGTT      
rJMSF018F15+          ATATACTGTTCCCATATTGGTCTCCACATTAACTCTCCACCNTAGTTGAGAGTT      
rJMSF026M02+          ATATACTGTTCCCATATTGGTCTCCACATTAACTCTCCACCTTAGTTGAGAGTTGATTAT
                      ____________________________________________________________
consensus             ATATACTGTTCCCATATTGGTCTCCACATTAACTCTCCACCTTAGTTGAGAGTTGATTAT