Contig 001380:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026E16Sequence625013571 (5)emb|CDP05731.1|1e-08unnamed protein product [Coffea canephora]749001380 (2)ref|XP_009606070.1|117PREDICTED: uncharacterized protein LOC104100523 [Nicotiana tomentosiformis]
JMSF050O07Sequence662013571 (5)emb|CDP05731.1|2e-08unnamed protein product [Coffea canephora]710001380 (2)ref|XP_009606070.1|114PREDICTED: uncharacterized protein LOC104100523 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF050O07+                                                       TTGCCAAAAGATGGT
rJMSF026E16+                                         CTGCCACTATGTCTTTGCCAAAAGATGGT
                      ____________________________________________________________
consensus                                            CTGCCACTATGTCTTTGCCAAAAGATGGT
 
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rJMSF050O07+          CCGAATAACGCTGCATCAGCTGCTGCTCGTGCCTGGATGTCAATCGGGGAAGCAAGTTAT
rJMSF026E16+          CCGAATAACGCTGCATCAGCTGCTGCTCGTGCCTGGATGTCAATCGGGGAAGCAAGTTAT
                      ____________________________________________________________
consensus             CCGAATAACGCTGCATCAGCTGCTGCTCGTGCCTGGATGTCAATCGGGGAAGCAAGTTAT
 
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rJMSF050O07+          AAACAGGCTGGTGAAAATACAAATTCCCAAAACAATCAGATATCTCCACGATCCACCCAT
rJMSF026E16+          AAACAGGCTGGTGAAAATACAAATTCCCAAAACAATCAGATATCTCCACGATCCACCCAT
                      ____________________________________________________________
consensus             AAACAGGCTGGTGAAAATACAAATTCCCAAAACAATCAGATATCTCCACGATCCACCCAT
 
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rJMSF050O07+          AATCCTCAGTCACAATTTCGGGGAGAACTTCCTGCTGCATATGGAATGTATATCCAACCT
rJMSF026E16+          AATCCTCAGTCACAATTTCGGGGAGAACTTCCTGCTGCATATGGAATGTATATCCAACCT
                      ____________________________________________________________
consensus             AATCCTCAGTCACAATTTCGGGGAGAACTTCCTGCTGCATATGGAATGTATATCCAACCT
 
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rJMSF050O07+          GGTAAGGGAAATTTTCCATTTCCATTTCATGCCTTTGTGCCCCATCCTGGCAGGGTAGGA
rJMSF026E16+          GGTAAGGGAAATTTTCCATTTCCATTTCATGCCTTTGTGCCCCATCCTGGCAGGGTAGGA
                      ____________________________________________________________
consensus             GGTAAGGGAAATTTTCCATTTCCATTTCATGCCTTTGTGCCCCATCCTGGCAGGGTAGGA
 
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rJMSF050O07+          ACTGAAGGTCAATCACCATATGAACCCATGGTTTTCCCACAATCAGTTCCTGCTGACTTG
rJMSF026E16+          ACTGAAGGTCAATCACCATATGAACCCATGGTTTTCCCACAATCAGTTCCTGCTGACTTG
                      ____________________________________________________________
consensus             ACTGAAGGTCAATCACCATATGAACCCATGGTTTTCCCACAATCAGTTCCTGCTGACTTG
 
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rJMSF050O07+          TCTAGGTTCCAAGTGCAACAACAACAATCTTCCAGGCCAAATCTCAATGCACCTGCTCCA
rJMSF026E16+          TCTAGGTTCCAAGTGCAACAACAACAATCTTCCAGGCCAAATCTCAATGCACCTGCTCCA
                      ____________________________________________________________
consensus             TCTAGGTTCCAAGTGCAACAACAACAATCTTCCAGGCCAAATCTCAATGCACCTGCTCCA
 
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rJMSF050O07+          CCACGACAGAAACGGGAATCAGTCCCTCCCGACCTAAACGTTAGTTTTCAGTCTTCTGGA
rJMSF026E16+          CCACGACAGAAACGGGAATCAGTCCCTCCCGACCTAAACGTTAGTTTTCAGTCTTCTGGA
                      ____________________________________________________________
consensus             CCACGACAGAAACGGGAATCAGTCCCTCCCGACCTAAACGTTAGTTTTCAGTCTTCTGGA
 
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rJMSF050O07+          TCTCCTGGCAGACCCTCTGGTGTTTTGGTTGATTCTCAGCACCCAGATCTGGCCTTGCAA
rJMSF026E16+          TCTCCTGGCAGACCCTCTGGTGTTTTGGTTGATTCTCAGCACCCAGATCTGGCCTTGCAA
                      ____________________________________________________________
consensus             TCTCCTGGCAGACCCTCTGGTGTTTTGGTTGATTCTCAGCACCCAGATCTGGCCTTGCAA
 
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rJMSF050O07+          CTCTGAGTCTTCTTTGATGAGTGGAGAAGGTTTGGTTGAATTCCCTAACAGCAGTTTTAG
rJMSF026E16+          CTCTGAGTCTTCTTTGATGAGTGGAGAAGGTTTGGTTGAATTCCCTAACAGCAGTTTTAG
                      ____________________________________________________________
consensus             CTCTGAGTCTTCTTTGATGAGTGGAGAAGGTTTGGTTGAATTCCCTAACAGCAGTTTTAG
 
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rJMSF050O07+          TTTATTCATGTTCAAGAAGGGTTTGTTTCTCATGCTTCTGATTCTTTGCAAAAAGAGGCT
rJMSF026E16+          TTTATTCATGTTCAAGAAGGGTTTGTTTCTCATGCTTCTGATTCTTTGCAAAAAGAGGCT
                      ____________________________________________________________
consensus             TTTATTCATGTTCAAGAAGGGTTTGTTTCTCATGCTTCTGATTCTTTGCAAAAAGAGGCT
 
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rJMSF050O07+          CATTTAAGGCTTTAGTGGTAGACTGGTAGACTTAGAATACATGCCTTCTAATTGCACAGG
rJMSF026E16+          CATTTAAGGCTTTAGTGGTAGACTGGTAGACTTAGAATACATGCCTTCTAATTGCACAGG
                      ____________________________________________________________
consensus             CATTTAAGGCTTTAGTGGTAGACTGGTAGACTTAGAATACATGCCTTCTAATTGCACAGG
 
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rJMSF050O07+          GCAAGGCAACTGAGGTTAATATGTCGTTCTCATTT                         
rJMSF026E16+          GCAAGGCAACTGAGGTTAATATGTCGTTCTCATTTAGAAATTAGAAATGGAACTAGCATT
                      ____________________________________________________________
consensus             GCAAGGCAACTGAGGTTAATATGTCGTTCTCATTTAGAAATTAGAAATGGAACTAGCATT