clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF035E18 | Sequence | 502 | 005108 (3) | ref|XP_009767715.1| | 7e-77 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X4 [Nicotiana sylv | 658 | 001375 (3) | ref|XP_011081653.1| | 7e-56 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 [Sesamum indicum] |
JMFF045P12 | Sequence | 633 | 005108 (3) | ref|XP_009767715.1| | 2e-76 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X4 [Nicotiana sylv | 649 | 001375 (3) | ref|XP_008452743.1| | 2e-44 | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1 [Cucumi |
JMSF025K12 | Sequence | 646 | 005108 (3) | ref|XP_010325023.1| | 7e-63 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X1 [Solanum lycope | 741 | 001375 (3) | ref|XP_008452746.1| | 4e-46 | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X2 [Cucumi |
This contig is upended
. : . : . : . : . : . :
rJMFF035E18+ TCTGCTGAAGAAAGTGATGGGCAACCAAA
____________________________________________________________
consensus TCTGCTGAAGAAAGTGATGGGCAACCAAA
. : . : . : . : . : . :
rJMFF035E18+ AGTTGAAAGATTATTTATAAAGAAGAAAGGAATTGGGTCTGATTCAAAGGCTGAACGCAT
rJMFF045P12+ TGAACGCAT
rJMSF025K12+ TGATTCAAAGGCTGAACGCAT
____________________________________________________________
consensus AGTTGAAAGATTATTTATAAAGAAGAAAGGAATTGGGTCTGATTCAAAGGCTGAACGCAT
. : . : . : . : . : . :
rJMFF035E18+ GGCTACAGCAGATGCAGACTTGCAATTACTGACCGGAGCTGAAAGAGAAAGACAACTGTT
rJMFF045P12+ GGCTACAGCAGATGCAGACTTGCAATTACTGACCGGAGCTGAAAGAGAAAGACAACTGTT
rJMSF025K12+ GGCTACAGCAGATGCAGACTTGCAATTACTGACCGGAGCTGAAAGAGAAAGACAACTGTT
____________________________________________________________
consensus GGCTACAGCAGATGCAGACTTGCAATTACTGACCGGAGCTGAAAGAGAAAGACAACTGTT
. : . : . : . : . : . :
rJMFF035E18+ GAAACAAAAGAAGCGCAGACGTCATGGACAAGAAGATGAAGTATTAGCAAAGTTGGAAAA
rJMFF045P12+ GAAACAAAAGAAGCGCAGACGTCATGGACAAGAAGATGAAGTATTAGCAAAGTTGGAAAA
rJMSF025K12+ GAAACAAAAGAAGCGCAGACGTCATGGACAAGAAGATGAAGTATTAGCAAAGTTGGAAAA
____________________________________________________________
consensus GAAACAAAAGAAGCGCAGACGTCATGGACAAGAAGATGAAGTATTAGCAAAGTTGGAAAA
. : . : . : . : . : . :
rJMFF035E18+ GTTTAAGGCATCAATGTCTAAAAAGCCCAATGGTGAAAATGAAGGAGGAAAGAGCGAGGA
rJMFF045P12+ GTTTAAGGCATCAATGTCTAAAAAGCCCAATGGTGAAAATGAAGGAGGAAAGAGCGAGGA
rJMSF025K12+ GTTTAAGGCATCAATGTCTAAAAAGCCCAATGGTGAAAATGAAGGAGGAAAGAGCGAGGA
____________________________________________________________
consensus GTTTAAGGCATCAATGTCTAAAAAGCCCAATGGTGAAAATGAAGGAGGAAAGAGCGAGGA
. : . : . : . : . : . :
rJMFF035E18+ TTTATCTGATTGGGCGTCTGTCAAGCTAAAATTTACTCCTGAGCCTGCAAAGAACAATAT
rJMFF045P12+ TTNATCTGATTGGGCGTCTGTCAAGCTAAAATTTACTCCTGAGCCTGCAAAGAACAATAT
rJMSF025K12+ TTTATCTGATTGGGCGTCTGTCAAGCTAAAATTTACTCCTGAGCCTGCAAAGAACAATAT
____________________________________________________________
consensus TTTATCTGATTGGGCGTCTGTCAAGCTAAAATTTACTCCTGAGCCTGCAAAGAACAATAT
. : . : . : . : . : . :
rJMFF035E18+ GTCTCGTAGCAATGACCCTAATGACTATGTGGTGCATGACCCTCTTTGGGAGAAAGGTAA
rJMFF045P12+ GTCTCGTAGCAATGACCCTAATGACTATGTGGTGCATGACCCTCTTTGGGAGAAAGGTAA
rJMSF025K12+ GTCTCGTAGCAATGACCCTAATGACTATGTGGTGCATGACCCTCTTTGGGAGAAAGGTAA
____________________________________________________________
consensus GTCTCGTAGCAATGACCCTAATGACTATGTGGTGCATGACCCTCTTTGGGAGAAAGGTAA
. : . : . : . : . : . :
rJMFF035E18+ AGAGAAGTTCAATAAAATGCAAGCGAAGCAGAAGCGCCGAGAACGAGAATGGGCGGGGAA
rJMFF045P12+ AGAGAAGTTCAATAAAATGCAAGCGAAGCAGAAGCGCCGAGAACGAGAATGGGCGGGGAA
rJMSF025K12+ AGAGAAGTTCAATAAAATGCAAGCGAAGCAGAAGCGCCGAGAACGAGAATGGGCGGGGAA
____________________________________________________________
consensus AGAGAAGTTCAATAAAATGCAAGCGAAGCAGAAGCGCCGAGAACGAGAATGGGCGGGGAA
. : . : . : . : . : . :
rJMFF035E18+ GTCTATTACCTAAGCTCATATGTCCATACGGGATTTAAACTATGCAAGGAACGAGCGAGC
rJMFF045P12+ GTCTATTACCTAAGCTCATATGTCCATACGGGATTTAAACTATGCAAGGAACGAGCGAGC
rJMSF025K12+ GTCTATTACCTAAGCTCATATGTCCATACGGGATTTAAACTATGCAAGGAACGAGCGAGC
____________________________________________________________
consensus GTCTATTACCTAAGCTCATATGTCCATACGGGATTTAAACTATGCAAGGAACGAGCGAGC
. : . : . : . : . : . :
rJMFF035E18+ CAGACTTTAGTATACCTGCCTGCCGCTCAATCACTCATACGGGATGCAGCGCCTCTAGGT
rJMFF045P12+ CAGACTTTAGTATACCTGCCTGCCGCTCAATCACTCATACGGGATGCAGCGCCTCTAGGT
rJMSF025K12+ CAGACTTTAGTATACCTGCCTGCCGCTCAATCACTCATACGGGATGCAACGCCTCTAGGT
____________________________________________________________
consensus CAGACTTTAGTATACCTGCCTGCCGCTCAATCACTCATACGGGATGCAGCGCCTCTAGGT
. : . : . : . : . : . :
rJMFF035E18+ AAACTCCTCCTACTGATGAAATTTGCAAGCCATTTTTGTACCAGCAAACATTCTCTCTGC
rJMFF045P12+ AAACTCCTCCTACTGATGAAATTTGCAAGCCATTTTTGTACCAGCAAACATTCTCTCTGC
rJMSF025K12+ AAACTCCTCCTACTGATGAAATTTGCAAGCCATTTTTGTACCAGCAAACATTCTCTCTGC
____________________________________________________________
consensus AAACTCCTCCTACTGATGAAATTTGCAAGCCATTTTTGTACCAGCAAACATTCTCTCTGC
. : . : . : . : . : . :
rJMFF035E18+ GCTAAATACATTCCAAACTGATGTAAGAT
rJMFF045P12+ GCTAAATACATTCCAAACTGATGTAAGATTGTCCTGGAAATGTAATTTTACTTTTTACA
rJMSF025K12+ GCTAAATACATTCCAAACTGATGTAAGATTGTCCTGGAAATGTAATTTTACTTTTTACAC
____________________________________________________________
consensus GCTAAATACATTCCAAACTGATGTAAGATTGTCCTGGAAATGTAATTTTACTTTTTACAC
. : . : . : . : . : . :
rJMSF025K12+ TCCCTCCCTCTTTATTTAATGGGTTGATTCAGATTTGATTTCTATACCTTTTCTCCGGTT
____________________________________________________________
consensus TCCCTCCCTCTTTATTTAATGGGTTGATTCAGATTTGATTTCTATACCTTTTCTCCGGTT
. : . : . : . : . : . :
rJMSF025K12+ GACATACTTAAATATACTGTTGTTTAGGTGCAACCCTTAACTAAAATATACTACCAGAGT
____________________________________________________________
consensus GACATACTTAAATATACTGTTGTTTAGGTGCAACCCTTAACTAAAATATACTACCAGAGT