Contig 001373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025I23Sequence687004865 (7)gb|EYU19141.1|3e-132hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]771001373 (2)ref|NP_001234275.1|3e-70DNA damage-binding protein 1 [Solanum lycopersicum] ref|NP_001233864.1| DNA dama
JMSF033C17Sequence729004865 (7)gb|EYU19141.1|3e-154hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]767001373 (2)gb|EYU19140.1|5e-103hypothetical protein MIMGU_mgv1a0005922mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF033C17+                              CGGCTGTTGAGATTGTGGACGATGACATTACCTCGGGGCG
                      ____________________________________________________________
consensus                                 CGGCTGTTGAGATTGTGGACGATGACATTACCTCGGGGCG
 
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rJMSF033C17+          GAGAACAATTTCAACCTCTTCACCGTTAGAAAAAACAGTGAAGGTGCAACCGACGAGGAG
                      ____________________________________________________________
consensus             GAGAACAATTTCAACCTCTTCACCGTTAGAAAAAACAGTGAAGGTGCAACCGACGAGGAG
 
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rJMSF033C17+          CGCAGCCGTCTTGAGGTGGTCGGTGAGTACCACCTCGGTGAGTTTGTAAATCGCTTCCGA
                      ____________________________________________________________
consensus             CGCAGCCGTCTTGAGGTGGTCGGTGAGTACCACCTCGGTGAGTTTGTAAATCGCTTCCGA
 
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rJMSF033C17+          CACGGCTCCCTAGTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
rJMSF025I23+                      GTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
                      ____________________________________________________________
consensus             CACGGCTCCCTAGTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
 
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rJMSF033C17+          TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
rJMSF025I23+          TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
                      ____________________________________________________________
consensus             TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
 
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rJMSF033C17+          TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
rJMSF025I23+          TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
                      ____________________________________________________________
consensus             TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
 
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rJMSF033C17+          CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
rJMSF025I23+          CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
                      ____________________________________________________________
consensus             CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
 
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rJMSF033C17+          GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
rJMSF025I23+          GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
                      ____________________________________________________________
consensus             GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
 
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rJMSF033C17+          AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
rJMSF025I23+          AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
                      ____________________________________________________________
consensus             AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
 
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rJMSF033C17+          CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
rJMSF025I23+          CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
                      ____________________________________________________________
consensus             CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
 
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rJMSF033C17+          ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
rJMSF025I23+          ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
                      ____________________________________________________________
consensus             ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
 
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rJMSF033C17+          CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
rJMSF025I23+          CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
                      ____________________________________________________________
consensus             CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
 
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rJMSF033C17+          TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
rJMSF025I23+          TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
                      ____________________________________________________________
consensus             TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
 
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rJMSF033C17+          AAAGGAC                                                     
rJMSF025I23+          AAAGGACAATGCAAGAATATAATAGGATTTACAGTATGAGTATTCAATTCAGATGTGAGG
                      ____________________________________________________________
consensus             AAAGGACAATGCAAGAATATAATAGGATTTACAGTATGAGTATTCAATTCAGATGTGAGG
 
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rJMSF025I23+          AATGTTTTGTTTACCCAATGAATTTTGTGATAATATTTAGTTAAATCTTTGAAACCAATA
                      ____________________________________________________________
consensus             AATGTTTTGTTTACCCAATGAATTTTGTGATAATATTTAGTTAAATCTTTGAAACCAATA