Contig 001373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025I23Sequence687004865 (7)gb|EYU19141.1|3e-132hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]771001373 (2)ref|NP_001234275.1|3e-70DNA damage-binding protein 1 [Solanum lycopersicum] ref|NP_001233864.1| DNA dama
JMSF033C17Sequence729004865 (7)gb|EYU19141.1|3e-154hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]767001373 (2)gb|EYU19140.1|5e-103hypothetical protein MIMGU_mgv1a0005922mg, partial [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033C17+ CGGCTGTTGAGATTGTGGACGATGACATTACCTCGGGGCG
                      ____________________________________________________________
consensus CGGCTGTTGAGATTGTGGACGATGACATTACCTCGGGGCG
 
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rJMSF033C17+ GAGAACAATTTCAACCTCTTCACCGTTAGAAAAAACAGTGAAGGTGCAACCGACGAGGAG
                      ____________________________________________________________
consensus GAGAACAATTTCAACCTCTTCACCGTTAGAAAAAACAGTGAAGGTGCAACCGACGAGGAG
 
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rJMSF033C17+ CGCAGCCGTCTTGAGGTGGTCGGTGAGTACCACCTCGGTGAGTTTGTAAATCGCTTCCGA
                      ____________________________________________________________
consensus CGCAGCCGTCTTGAGGTGGTCGGTGAGTACCACCTCGGTGAGTTTGTAAATCGCTTCCGA
 
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rJMSF033C17+ CACGGCTCCCTAGTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
rJMSF025I23+ GTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
                      ____________________________________________________________
consensus CACGGCTCCCTAGTCATGCGACTGCCGGATTCCGATGTCGGCCAGATACCGACTGTCATT
 
. : . : . : . : . : . :
rJMSF033C17+ TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
rJMSF025I23+ TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
                      ____________________________________________________________
consensus TTCGGGACGGTGAATGGCGTTATCGGGGTCATAGCCTCTCTCCCTCATGACCAATACGTC
 
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rJMSF033C17+ TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
rJMSF025I23+ TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
                      ____________________________________________________________
consensus TTCTTGGAGAAACTGCAGACACACTTGAGGAAAGTGATAAAGGGCGTGGGAGGGCTGAGT
 
. : . : . : . : . : . :
rJMSF033C17+ CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
rJMSF025I23+ CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
                      ____________________________________________________________
consensus CACGAGCAATGGAGATCCTTTTACAACGAGAAGAAAACCGTCGATGCCAAGAACTTCTTG
 
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rJMSF033C17+ GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
rJMSF025I23+ GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
                      ____________________________________________________________
consensus GACGGGGATTTGATCGAGTCATTCCTAGATCTCTCCCGGAATCGGATGGAGGAGATATCA
 
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rJMSF033C17+ AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
rJMSF025I23+ AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
                      ____________________________________________________________
consensus AAGGCAATGGTTGTTCCTGTGGAGGAACTCATGAAGAGAGTTGAAGAGTTGACAAGGTTG
 
. : . : . : . : . : . :
rJMSF033C17+ CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
rJMSF025I23+ CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
                      ____________________________________________________________
consensus CATTAGCCACCCACACACACAAAATCTTTTATAAGTTATCACTGTTGATAAATTTGGGGT
 
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rJMSF033C17+ ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
rJMSF025I23+ ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
                      ____________________________________________________________
consensus ATCATTTCCCATTCCTGTAAACATTGTAACTCTGTTTCTGCATTTTCTTATCATGTGGCT
 
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rJMSF033C17+ CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
rJMSF025I23+ CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
                      ____________________________________________________________
consensus CTGTGATAAAATGTTATTTCATTATATAAACCCATAGGCCTTTTTTTGGGTTTTTTTAAG
 
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rJMSF033C17+ TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
rJMSF025I23+ TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
                      ____________________________________________________________
consensus TAAAGTCTGTTCTTGATGGGAGTCTCATGGCACCATCTGTTAGTGCTTGGGATGAAGATT
 
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rJMSF033C17+ AAAGGAC
rJMSF025I23+ AAAGGACAATGCAAGAATATAATAGGATTTACAGTATGAGTATTCAATTCAGATGTGAGG
                      ____________________________________________________________
consensus AAAGGACAATGCAAGAATATAATAGGATTTACAGTATGAGTATTCAATTCAGATGTGAGG
 
. : . : . : . : . : . :
rJMSF025I23+ AATGTTTTGTTTACCCAATGAATTTTGTGATAATATTTAGTTAAATCTTTGAAACCAATA
                      ____________________________________________________________
consensus AATGTTTTGTTTACCCAATGAATTTTGTGATAATATTTAGTTAAATCTTTGAAACCAATA