Contig 001364:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF023E24+                                                    AAGNAGGCATCGCTANGT
                      ____________________________________________________________
consensus                                                       AAGNAGGCATCGCTANGT
 
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rJMSF024D24+                  AAGATAGGATTCTGATGAGTGACATTGTTTTCTTGCGTGCTTGGACTCAAGN
rJMSF023E24+          GCNCATTGAAGATAGGATTCTGATGAGTGNCATTG-TTTCTTGCGTGCTTGGACTCAAGT
                      ____________________________________________________________
consensus             GCNCATTGAAGATAGGATTCTGATGAGTGACATTGTTTTCTTGCGTGCTTGGACTCAAGT
 
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rJMSF024D24+          TGAAGTTCCTCAGTTTTNCAATCCATTGACTACTGCATTGCAGCCACGTGGTAAGACCTG
rJMSF023E24+          TGAAGTTCCTCAGTTTTACAATCCATTGACTACTGCATTGCAGCCACGTGGTAAGACCTG
                      ____________________________________________________________
consensus             TGAAGTTCCTCAGTTTTACAATCCATTGACTACTGCATTGCAGCCACGTGGTAAGACCTG
 
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rJMSF024D24+          GCAAGGAATGAAAACAGTTTCCGAGTTAAGGAGAGAACATAATGTGCCTGTTCCAGTGAA
rJMSF023E24+          GCAAGGAATGAAAACAGTTTCCGAGTTAAGGAGAGAACATAATGTGCCTGTTCCAGTGAA
                      ____________________________________________________________
consensus             GCAAGGAATGAAAACAGTTTCCGAGTTAAGGAGAGAACATAATGTGCCTGTTCCAGTGAA
 
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rJMSF024D24+          CAAGGACTCGTTGTATAAGGCAATCGAAAGAAAACCAAGAAAGTTCAATCCCTTGGTTAT
rJMSF023E24+          CAAGGACTCGTTGTATAAGGCAATCGAAAGAAAACCAAGAAAGTTCAATCCCTTGGTTAT
                      ____________________________________________________________
consensus             CAAGGACTCGTTGTATAAGGCAATCGAAAGAAAACCAAGAAAGTTCAATCCCTTGGTTAT
 
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rJMSF024D24+          TCCCAAGTCATTGCAAGCAGCTCTCCCCTTCTCCTCAAAACCAAAGGATACTCCATCTCG
rJMSF023E24+          TCCCAAGTCATTGCAAGCAGCTCTCCCCTTCTCCTCAAAACCAAAGGATACTCCATCTCG
                      ____________________________________________________________
consensus             TCCCAAGTCATTGCAAGCAGCTCTCCCCTTCTCCTCAAAACCAAAGGATACTCCATCTCG
 
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rJMSF024D24+          GAGGAGGCCTACTCTGGAAAATAGGAGGGCAGTTGTGATGGAACCTAATGAGAAGAAACT
rJMSF023E24+          GAGGAGGCCTACTCTGGAAAATAGGAGGGCAGTTGTGATGGAACCTAATGAGAAGAAACT
                      ____________________________________________________________
consensus             GAGGAGGCCTACTCTGGAAAATAGGAGGGCAGTTGTGATGGAACCTAATGAGAAGAAACT
 
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rJMSF024D24+          GCAACGTGTTCTTCAACATCTCCGGCTTATTAGGAGTGAGAAGGTTAAAAAGCGTAAACT
rJMSF023E24+          GCAACGTGTTCTTCAACATCTCCGGCTTATTAGGAGTGAGAAGGTTAAAAAGCGTAAACT
                      ____________________________________________________________
consensus             GCAACGTGTTCTTCAACATCTCCGGCTTATTAGGAGTGAGAAGGTTAAAAAGCGTAAACT
 
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rJMSF024D24+          CAAAGACCAAGAAAGGAAGAAAGCAGCTGAAGCGGAGAAGGCCAAGGAAGAACTAGTGTC
rJMSF023E24+          CAAAGACCAAGAAAGGAAGAAAGCAGCTGAAGCGGAGAAGGCCAAGGAAGAACTAGTGTC
                      ____________________________________________________________
consensus             CAAAGACCAAGAAAGGAAGAAAGCAGCTGAAGCGGAGAAGGCCAAGGAAGAACTAGTGTC
 
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rJMSF024D24+          GAAGAAGCGGCAGAGAGAAGAACGTCGAGATAGGTATCGTGTGCAGGACAAACTGAAGAA
rJMSF023E24+          GAAGAAGCGGCAGAGAGAAGAACGTCGAGATAGGTATCGTGTGCAGGACAAACTGAAGAA
                      ____________________________________________________________
consensus             GAAGAAGCGGCAGAGAGAAGAACGTCGAGATAGGTATCGTGTGCAGGACAAACTGAAGAA
 
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rJMSF024D24+          GAGAAGTCGCAGAGATTAATTTTCTTTTTAATACTATTTTCTGGCTGAGTTGTTAATTCA
rJMSF023E24+          GAGAAGTCGCAGAGATTAATTTTCTTTTTAATACTATTTTCTGGCTGAGTTGTTAATTCA
                      ____________________________________________________________
consensus             GAGAAGTCGCAGAGATTAATTTTCTTTTTAATACTATTTTCTGGCTGAGTTGTTAATTCA
 
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rJMSF024D24+          AAAACTGAAGGGAAAAGAGGCAGGGAGAGTGAGAGAGGCTGAGAGCTTCACTCTGAGATT
rJMSF023E24+          AAAACTGAAGGGAAAAGAGGCAGGGAGAGTGAGAGAGGCTGAGAGCTTCACTCTGAGATT
                      ____________________________________________________________
consensus             AAAACTGAAGGGAAAAGAGGCAGGGAGAGTGAGAGAGGCTGAGAGCTTCACTCTGAGATT
 
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rJMSF024D24+          TTGGGGAGAGGAGAGGAGAGAATATGATGGAAGAGAATTCTTTAATTGTATGCATTTTTT
rJMSF023E24+          TTGGGGAGAGGAGAGGAGAGAATATGATGGAAGAGAATTCTTTAATTGTATGCATTTTTT
                      ____________________________________________________________
consensus             TTGGGGAGAGGAGAGGAGAGAATATGATGGAAGAGAATTCTTTAATTGTATGCATTTTTT
 
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rJMSF024D24+          GGGTATAATATCGGAAAACAAATATCAGTTGTTAGTTCTAAGTTGCTGAACACTACAAAT
rJMSF023E24+          GGGTATAATATCGGAAAACAAATATCAGTTGTTAGTTCTAAGTTGCTGAACACTACAAAT
                      ____________________________________________________________
consensus             GGGTATAATATCGGAAAACAAATATCAGTTGTTAGTTCTAAGTTGCTGAACACTACAAAT