| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026K17 | Sequence | 662 | 001362 (4) | ref|XP_011097926.1| | 1e-64 | PREDICTED: probable galacturonosyltransferase 12 [Sesamum indicum] | |||||
| JMFF029A03 | Sequence | 575 | 012646 (3) | gb|EYU19206.1| | 2e-38 | hypothetical protein MIMGU_mgv1a004325mg [Erythranthe guttata] | 519 | 001362 (4) | ref|XP_006352487.1| | 2e-38 | PREDICTED: probable galacturonosyltransferase 12-like [Solanum tuberosum] |
| JMSF022P22 | Sequence | 717 | 012646 (3) | ref|XP_009611117.1| | 2e-83 | PREDICTED: probable galacturonosyltransferase 12 [Nicotiana tomentosiformis] | 731 | 001362 (4) | ref|XP_006452153.1| | 4e-83 | hypothetical protein CICLE_v10007975mg [Citrus clementina] gb|ESR65393.1| hypoth |
| JMSF033L12 | Sequence | 597 | 001362 (4) | ref|XP_006352487.1| | 7e-49 | PREDICTED: probable galacturonosyltransferase 12-like [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF026K17+ TCTAATAGCAA
rJMSF022P22+ CCTCTAATAGCAA
____________________________________________________________
consensus CCTCTAATAGCAA
. : . : . : . : . : . :
rJMFF026K17+ AAAGTTTCGATCCTAATGAGTGTGCATGGGCATNCGGCATGAACATCTTTGATCCTTGAG
rJMSF022P22+ AAAGTTTCGATCCTAATGAGTGTGCATGGGCATACGGCATGAACATCTTTGAT-CTTGAG
____________________________________________________________
consensus AAAGTTTCGATCCTAATGAGTGTGCATGGGCATACGGCATGAACATCTTTGATCCTTGAG
. : . : . : . : . : . :
rJMFF026K17+ GCATGGAGAAGAACAAATATAAGCCGGACATACCACCACTGGCTTGAACACAACTTAAAA
rJMSF033L12+ AACTTAAAA
rJMSF022P22+ GCATGGAGAAGAACAAATATAAGCCGGACATACCACCACTGGCTTGAACAGAACTTAAAA
____________________________________________________________
consensus GCATGGAGAAGAACAAATATAAGCCGGACATACCACCACTGGCTTGAACAGAACTTAAAA
. : . : . : . : . : . :
rJMFF026K17+ TCAGACCTGAGTTTGTGGCAACTAGGGACATTACCTCCAGGCGTAATTGCATTCCACGGC
rJMSF033L12+ TCAGACCNGAGTTTGTGGCAACTAGGGACATTACCTCCAGGCCTAATTGCATTCCACGGC
rJMFF029A03+ TAATTGCATTCCACGGC
rJMSF022P22+ TCAGACCTGAGTTTGTGGCAACTAGGGACATTACCTCCAGGCCTAATTGCATTCCACGGC
____________________________________________________________
consensus TCAGACCTGAGTTTGTGGCAACTAGGGACATTACCTCCAGGCCTAATTGCATTCCACGGC
. : . : . : . : . : . :
rJMFF026K17+ CATGTACATGTCATCGATTCCTTCTGGCACATGTTAGGACTCGGGTACCAGGATAATACA
rJMSF033L12+ CATGTACATGTCATCGATTCNTTNTGGCACATGTTAGGACTCGGGTACCAGGATAATACA
rJMFF029A03+ CATGTACATGTCATCGATTCNTTCTGGCACATGTTAGGACTCGGGTACCAGGATAATACA
rJMSF022P22+ CATGTACATGTCATCGATTCCTTCTGGCACATGTTAGGACTCGGGTACCAGGATAATACA
____________________________________________________________
consensus CATGTACATGTCATCGATTCCTTCTGGCACATGTTAGGACTCGGGTACCAGGATAATACA
. : . : . : . : . : . :
rJMFF026K17+ AGCATTGCAGATGCTAAAAGTGCGGGAGTTGTCCACTTCAATGGCAGAGCAAAACCCTGG
rJMSF033L12+ AGCATTGCAGATGCTAAAAGTGCGGGAGTTGTCCACTTCAATGGCAGAGCAAAACCCTGG
rJMFF029A03+ AGCATNGCAGATGNTAAAAGTGCGGGAGTTGTCCNCTTCAATGGCAGAGCAAAACCCTGG
rJMSF022P22+ AGCATTGCAGATGCTAAAAGTGCGGGAGTTGTCCACTTCAATGGCAGAGCAAAACCCTGG
____________________________________________________________
consensus AGCATTGCAGATGCTAAAAGTGCGGGAGTTGTCCACTTCAATGGCAGAGCAAAACCCTGG
. : . : . : . : . : . :
rJMFF026K17+ CTAGACATAGCATTCCCACAACTCCGATCATTATGGANCAAGTATGTCAATTTCTCGGAT
rJMSF033L12+ CTAGACATAGCATTCCCACAACTCNGATCANTANGGACCAAGTATGTCAATTTCTCGGAT
rJMFF029A03+ CTAGACATAGCATTCCCACAACTCCGATCATTATGGACCAAGTATGTCAATTTCTNGGAT
rJMSF022P22+ CTAGACATAGCATTCCCACAACTCCGATCATTATGGACCAAGTATGTCAATTTCTCGGAT
____________________________________________________________
consensus CTAGACATAGCATTCCCACAACTCCGATCATTATGGACCAAGTATGTCAATTTCTCGGAT
. : . : . : . : . : . :
rJMFF026K17+ ACATTCATTAAAAGCTGTCATATTACGGCATCATGAGTTTGGTTCAGGAAGGACTATCTC
rJMSF033L12+ ACATTCATTAAAAGCTGTCATATTACGGCATCANGAGTTNGGTTCAGGAAGGACTATCTC
rJMFF029A03+ ACATTCATTAAAAGCTGTCATATTACGGCATCATGAGTNTGGTTCAGGAAGGANTATCTN
rJMSF022P22+ ACATTCATTAAAAGCTGTCATATTACGGCATCATGAGTTTGGTTCAGGAAGGACTATCTC
____________________________________________________________
consensus ACATTCATTAAAAGCTGTCATATTACGGCATCATGAGTTTGGTTCAGGAAGGACTATCTC
. : . : . : . : . : . :
rJMFF026K17+ GACCTTCAGCTTTCATAGAGGAGAAGAATCCAGGGAAACATTTTTGAAAGCAGGAGCAAC
rJMSF033L12+ GACCTTCAGCTTTCATAGAGGAGAAGAATCCAGGGAAACATTTNTGAAAGCAGGAGCAAC
rJMFF029A03+ GNCCTTCAGCTTTCATAGAGGAGAAGAATCCAGGGAAACATNTTTGAAAGCAGGAGCAAC
rJMSF022P22+ GACCTTCAGCTTTCATAGAGGAGAAGAATCCAGGGAAACATTTTTGAAAGCAGGAGCAAC
____________________________________________________________
consensus GACCTTCAGCTTTCATAGAGGAGAAGAATCCAGGGAAACATTTTTGAAAGCAGGAGCAAC
. : . : . : . : . : . :
rJMFF026K17+ AGCTCCTGATATGAGTATATGAGAAGAAAGCTGCCCTGGACTTACGTTTTGTCAACTGGT
rJMSF033L12+ AGCTCCTGATATGAGTATATGAGAAGAAAGCTGCCCTGGACTNACGTTTTGTCAACTGGT
rJMFF029A03+ AGCTCCTGATATGAGTATATGAGAAGAAAGCTGCCCTGGACTTACGTTTTGTCAACTGGT
rJMSF022P22+ AGCTCCTGATATGAGTATATGAGAAGAAAGCTGCCCTGGACTTACGTTTTGTCAACTGGT
____________________________________________________________
consensus AGCTCCTGATATGAGTATATGAGAAGAAAGCTGCCCTGGACTTACGTTTTGTCAACTGGT
. : . : . : . : . : . :
rJMFF026K17+ CTTCCTTCA-CTCAAGCACCCAAAGTTGTCTTCTTTATTGGTATAAATGCATGGTTGGTT
rJMSF033L12+ CTTCCNTCATCTCAAGCACCCAAAGTTGTCTTCTTTATTGGTATAAANGCATGGTTGGTN
rJMFF029A03+ CTTCCTTCA-CTCAAGCACCCAAAGTNGTCTTCTTTATTGGTATAAATGCATGGTTGGTT
rJMSF022P22+ CTTCCTTCA-CTCAAGCACCCAAAGTTGTCTTCTTTATTGGTATAAATGCATGGTTGGTT
____________________________________________________________
consensus CTTCCTTCA-CTCAAGCACCCAAAGTTGTCTTCTTTATTGGTATAAATGCATGGTTGGTT
. : . : . : . : . : . :
rJMFF026K17+ TTAAGAT
rJMSF033L12+ NTAAGATTATCTTAGGATNTCTGAATNTTTTCTCTATATGTATCTTCGTCAAAGAAATCC
rJMFF029A03+ TTAAGATTATCNTAGGATGTCNGAATTTTTTCTCTATANGTATCTTCGTCAAAGAAATCC
rJMSF022P22+ TTAAGATTATCTTAGGATGTCTGAATTTTTTCTCTATATGTATCTTCGTCAAAGAAATCC
____________________________________________________________
consensus TTAAGATTATCTTAGGATGTCTGAATTTTTTCTCTATATGTATCTTCGTCAAAGAAATCC
. : . : . : . : . : . :
rJMSF033L12+ CAATGCACANATACTAAGAAAATGCAAAT
rJMFF029A03+ CAA
rJMSF022P22+ CAATGCAAGTATATTAAGAAAATGCAAATATATTAAGAAAAAACTGTATTCAATAGATAC
____________________________________________________________
consensus CAATGCACGTATATTAAGAAAATGCAAATATATTAAGAAAAAACTGTATTCAATAGATAC