Contig 001359:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022K06Sequence363005083 (3)710001359 (2)
JMSF050C02Sequence584005083 (3)678001359 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050C02+ TTTTTTGGGGTCTTCTAA
rJMSF022K06+ GATTACAGCAATTTGANGCTTTTTTTTTTTAATTTTTTGGGGTCTTCTAA
                      ____________________________________________________________
consensus GATTACAGCAATTTGANGCTTTTTTTTTTTAATTTTTTGGGGTCTTCTAA
 
. : . : . : . : . : . :
rJMSF050C02+ TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
rJMSF022K06+ TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
                      ____________________________________________________________
consensus TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
 
. : . : . : . : . : . :
rJMSF050C02+ TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
rJMSF022K06+ TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
                      ____________________________________________________________
consensus TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
 
. : . : . : . : . : . :
rJMSF050C02+ TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
rJMSF022K06+ TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
                      ____________________________________________________________
consensus TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
 
. : . : . : . : . : . :
rJMSF050C02+ TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
rJMSF022K06+ TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
                      ____________________________________________________________
consensus TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
 
. : . : . : . : . : . :
rJMSF050C02+ ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
rJMSF022K06+ ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
                      ____________________________________________________________
consensus ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
 
. : . : . : . : . : . :
rJMSF050C02+ GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTTCACTTAAAAA
rJMSF022K06+ GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTCCACTTAAAAA
                      ____________________________________________________________
consensus GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTTCACTTAAAAA
 
. : . : . : . : . : . :
rJMSF050C02+ ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
rJMSF022K06+ ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
                      ____________________________________________________________
consensus ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
 
. : . : . : . : . : . :
rJMSF050C02+ CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
rJMSF022K06+ CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
                      ____________________________________________________________
consensus CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
 
. : . : . : . : . : . :
rJMSF050C02+ ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
rJMSF022K06+ ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
                      ____________________________________________________________
consensus ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
 
. : . : . : . : . : . :
rJMSF050C02+ TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
rJMSF022K06+ TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
                      ____________________________________________________________
consensus TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
 
. : . : . : . : . : . :
rJMSF050C02+ TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTANAGCTAGCAT
rJMSF022K06+ TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTATAGCTAGCATCTCACA
                      ____________________________________________________________
consensus TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTATAGCTAGCATCTCACA