Contig 001359:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF050C02+                                                    TTTTTTGGGGTCTTCTAA
rJMSF022K06+                    GATTACAGCAATTTGANGCTTTTTTTTTTTAATTTTTTGGGGTCTTCTAA
                      ____________________________________________________________
consensus                       GATTACAGCAATTTGANGCTTTTTTTTTTTAATTTTTTGGGGTCTTCTAA
 
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rJMSF050C02+          TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
rJMSF022K06+          TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
                      ____________________________________________________________
consensus             TCCCATTATTCTAACCTAAACATAATACATGTCAATATAATACAGTAATCCTCTGATTTC
 
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rJMSF050C02+          TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
rJMSF022K06+          TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
                      ____________________________________________________________
consensus             TTTCAAGTTCGAAATATCTTGTTGCATCTCAAATTTCTGATTCATGTTTCTACTGACTGC
 
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rJMSF050C02+          TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
rJMSF022K06+          TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
                      ____________________________________________________________
consensus             TCATGATATATTTGTTCTTTCTGGTCTGTTCCATTGGAAATACTACCTGCAATAATTAGT
 
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rJMSF050C02+          TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
rJMSF022K06+          TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
                      ____________________________________________________________
consensus             TTTCTTTCTACAGTATGTGGTCTTTGGACATAACATGCCTTAACCTATGGAGTATCAAGG
 
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rJMSF050C02+          ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
rJMSF022K06+          ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
                      ____________________________________________________________
consensus             ATCACTCTTAGGCATTGATACACTTCTTGGTTGGCCTTTACACCTCCCTATCTCTAAGGT
 
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rJMSF050C02+          GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTTCACTTAAAAA
rJMSF022K06+          GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTCCACTTAAAAA
                      ____________________________________________________________
consensus             GAATTAATTCTATAGCATTTTATTTTGACTTTATCTTTCCCGTATAATTTCACTTAAAAA
 
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rJMSF050C02+          ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
rJMSF022K06+          ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
                      ____________________________________________________________
consensus             ATTGGGATCTAACATATTTCTGTGCAAGTTTTGCCTCTCCCAGTTCAAGTTTCCCCAAAA
 
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rJMSF050C02+          CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
rJMSF022K06+          CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
                      ____________________________________________________________
consensus             CAAATGAGCATCACTTTATAAATCTTAAAAAGGAAGAAGTTTTGTGAGATAGAGAGGAAA
 
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rJMSF050C02+          ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
rJMSF022K06+          ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
                      ____________________________________________________________
consensus             ATATTACCTCCTGTTTCTTGATCTTTCTCTTGTGTTTCTGTACAGTGTAAATGTGAGGTT
 
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rJMSF050C02+          TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
rJMSF022K06+          TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
                      ____________________________________________________________
consensus             TCACTTTCTATTGTGTTTCATTGTAAATGTGGGTTTCACTATCTTTCTCTTGTGTTTCCG
 
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rJMSF050C02+          TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTANAGCTAGCAT      
rJMSF022K06+          TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTATAGCTAGCATCTCACA
                      ____________________________________________________________
consensus             TGTAAATGTGGAGTTTCACTTTCTCTTGTGTTTCATTGTATTTATAGCTAGCATCTCACA