Contig 001357:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002F04Sequence385010547 (3)gb|EPS70149.1|8e-08hypothetical protein M569_04613, partial [Genlisea aurea]260001357 (3)
JMSF022D22Sequence658010547 (3)gb|EPS70149.1|3e-06hypothetical protein M569_04613, partial [Genlisea aurea]332001357 (3)
JMSF047M12Sequence663010547 (3)gb|EPS70149.1|4e-06hypothetical protein M569_04613, partial [Genlisea aurea]323001357 (3)

Alignment

This contig is upended


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rJMSF002F04+                                        TTTTTTGGGGGGGGGGGGGGGTGTTCCTCT
rJMSF047M12+                                    AAATTTTTTGGGGGGGGGGGGGGGGTGTTCCTCT
rJMSF022D22+                                        TTTTTNGGGGGGGGGGGGGGGTGTTCCTCT
                      ____________________________________________________________
consensus                                       AAATTTTTTTGGGGGGGGGGGGGGGTGTTCCTCT
 
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rJMSF002F04+          CTTTAATGACCACCATCAATAAGGACCTAGGACTGGACTAAGGGTTGGCCCTGGCCTGAT
rJMSF047M12+          CTTTAATGACCACCATCAATAAGGACCTAGGACTGGACTAAGGGTTGGCCCTGGCCTGAT
rJMSF022D22+          CTTTAATGACCACCATCAATAAGGACCTAGGACTGGACTAAGGGTTGGCCCTGGCCTGAT
                      ____________________________________________________________
consensus             CTTTAATGACCACCATCAATAAGGACCTAGGACTGGACTAAGGGTTGGCCCTGGCCTGAT
 
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rJMSF002F04+          GTTGCCACATCAATGGTGGGGGAAGATCATGATAATGCAAAATTTGAATAAGACATAAGC
rJMSF047M12+          GTTGCCACATCAATGGTGGGGGAAGATCATGATAATGCAAAATTTGAATAAGACATAAGC
rJMSF022D22+          GTTGCCACATCAATGGTGGGGGAAGATCATGATAATGCAAAATTTGAATAAGACATAAGC
                      ____________________________________________________________
consensus             GTTGCCACATCAATGGTGGGGGAAGATCATGATAATGCAAAATTTGAATAAGACATAAGC
 
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rJMSF002F04+          AGCAGTCTTGGATGCTCTTGTTGGCCCACCCGCATCCGGTATCATCACCACTGTGGGACT
rJMSF047M12+          AGCAGTCTTGGATGCTCTTGTTGGCCCACCCGCATCCGGTATCATCACCACTGTGGGACT
rJMSF022D22+          AGCAGTCTTGGATGCTCTTGTTGGCCCACCCGCATCCGGTATCATCACCACTGTGGGACT
                      ____________________________________________________________
consensus             AGCAGTCTTGGATGCTCTTGTTGGCCCACCCGCATCCGGTATCATCACCACTGTGGGACT
 
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rJMSF002F04+          AATATAAATTCGGCTCGAGTCCACTTTTTGTGTAATTAGAATAATGG             
rJMSF047M12+          AATATAAATTCGGCTCGAGTCCACTTTTTGTGTAATTAGAATAATGGGTTTCTTCACCCA
rJMSF022D22+          AATATAAATTCGGCTCGAGTCCACTTTTTGNGTAATTAGAATAATGGGTTTCTTCACCCA
                      ____________________________________________________________
consensus             AATATAAATTCGGCTCGAGTCCACTTTTTGTGTAATTAGAATAATGGGTTTCTTCACCCA
 
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rJMSF047M12+          AGTTCAGTTAAGAATATTTTATTAGCACCATCTTAGTTAGGTAGA               
rJMSF022D22+          AGTTCAGTTAAGAATATTTTATTAGCACCATNTNAGTTAGGTAGAACTTGTGTATTATTA
                      ____________________________________________________________
consensus             AGTTCAGTTAAGAATATTTTATTAGCACCATCTTAGTTAGGTAGAACTTGTGTATTATTA