Contig 001356:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I21Sequence296006349 (3)ref|XP_004246577.1|51.6PREDICTED: uncharacterized protein LOC101247746 [Solanum lycopersicum]166001356 (3)
JMSF022C12Sequence572006349 (3)ref|XP_006341185.1|171PREDICTED: uncharacterized protein LOC102600206 [Solanum tuberosum]690001356 (3)ref|XP_011101478.1|153PREDICTED: uncharacterized protein LOC105179524 [Sesamum indicum]
JMSF024M11Sequence655006349 (3)ref|XP_006341185.1|155PREDICTED: uncharacterized protein LOC102600206 [Solanum tuberosum]743001356 (3)ref|XP_011101478.1|253PREDICTED: uncharacterized protein LOC105179524 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024M11+ GGTGTGCAGACTCGTTTGCAAAGTGCATTTTCTATGCCAGAGGTTGCCGAGCCA
                      ____________________________________________________________
consensus GGTGTGCAGACTCGTTTGCAAAGTGCATTTTCTATGCCAGAGGTTGCCGAGCCA
 
. : . : . : . : . : . :
rJMSF024M11+ TACAATAGGCAACGTGCAATCCGCCATCTCGAAAAGGGAAGAGTTGTGATTTTTGGTGGT
rJMSF022C12+ GAAAAGGGAAGAGTTGTGATTTTTGGTGGT
                      ____________________________________________________________
consensus TACAATAGGCAACGTGCAATCCGCCATCTCGAAAAGGGAAGAGTTGTGATTTTTGGTGGT
 
. : . : . : . : . : . :
rJMSF024M11+ ATTGGAGCTGGCACAGGAATTTCACTCTTCACTACTGATACAGCCGCAGCTCTTAGAGCT
rJMSF022C12+ ATTGGAGNTGGCACAGGAATTTCNCTCTTCACTACTGATACAGCCGCAGCTCTTAGAGCT
                      ____________________________________________________________
consensus ATTGGAGCTGGCACAGGAATTTCACTCTTCACTACTGATACAGCCGCAGCTCTTAGAGCT
 
. : . : . : . : . : . :
rJMSF024M11+ TCTGAGATTCACGCCGAGGCCATGCTTAAAGGCACAAATGTAGAAGGTGTGTACGTTTGT
rJMSF022C12+ TCTGAGATTCNCGCCGAGGCCATGCTTAAANGCACAAATGTAGANGGTGTGTACGTTTGT
                      ____________________________________________________________
consensus TCTGAGATTCACGCCGAGGCCATGCTTAAAGGCACAAATGTAGAAGGTGTGTACGTTTGT
 
. : . : . : . : . : . :
rJMSF024M11+ GACTCAAGAAGCAACAACTTAGCAGCTGAGCACATTTCCTACCGGGATCTTGCTTCCAAA
rJMSF022C12+ GACTCAAGAAGCAACAANTTAGCAGCTGAGCACATTTCCTCCCGGGATCTTGCTTCCAAA
                      ____________________________________________________________
consensus GACTCAAGAAGCAACAACTTAGCAGCTGAGCACATTTCCTCCCGGGATCTTGCTTCCAAA
 
. : . : . : . : . : . :
rJMSF024M11+ GGGGCTGCTCCAATCGACATGATGGCTGTTAATTGCTGCGAGGAGAATGGAATTCCAGTG
rJMSF022C12+ GGGGCTGCTCCAATCGACATNATGGCTNTTAATTGCTGCGAGGAGAATGGAATTCCAGTG
                      ____________________________________________________________
consensus GGGGCTGCTCCAATCGACATGATGGCTGTTAATTGCTGCGAGGAGAATGGAATTCCAGTG
 
. : . : . : . : . : . :
rJMSF024M11+ GTCATTTTCAATCTTCACGATCACGGGAACATATCAAGGGCATTAACCGGAGAGCCAGTT
rJMSF022C12+ GTCATNTTCAATCTTCACGATCACGGGAACANATCAAGGGCATTNACCGGNGAGCCAGTT
                      ____________________________________________________________
consensus GTCATTTTCAATCTTCACGATCACGGGAACATATCAAGGGCATTAACCGGAGAGCCAGTT
 
. : . : . : . : . : . :
rJMSF024M11+ GGAACTCTGATTGATCAAACAGGAAGGGTTAGCTAGTAGTATTTGATAACGCAGTAGATT
rJMSF022C12+ GGAACTCTGATTGATCAAACAGGAAGGGTNAGCTAGTAGTATTTGATAACGCAGTAGATT
                      ____________________________________________________________
consensus GGAACTCTGATTGATCAAACAGGAAGGGTTAGCTAGTAGTATTTGATAACGCAGTAGATT
 
. : . : . : . : . : . :
rJMSF002I21+ TATTAGAACAGAGGAACCTATAATCGCGTCACCATCCAGATTCCNGGNT
rJMSF024M11+ ACGTTCCCAACTATTAGAACAGAGGAACCTATAATCACGTCACCATCCAGATTCCAGGTT
rJMSF022C12+ ACGTTCCCAACTATTAGNACAGAGGAACCNATAATCACGTCNCCATCCAGATTCCAGGTT
                      ____________________________________________________________
consensus ACGTTCCCAACTATTAGAACAGAGGAACCTATAATCACGTCACCATCCAGATTCCAGGTT
 
. : . : . : . : . : . :
rJMSF002I21+ AGTTGAAGGCTCAGTCNCACAAGGAGAAGGTGCAGCTCTGTATTGTATAATAGGTACTTT
rJMSF024M11+ AGTTGAAGGCTCAGTCACACAAGGAGAAGGTGCAGCTCTGTATTGTATAATAGGTACTTT
rJMSF022C12+ AGTTGAAGGCTCAGTCACACANGGAGAAGGTGCAGCTCTGTATTGTNTAATAGGTACTTT
                      ____________________________________________________________
consensus AGTTGAAGGCTCAGTCACACAAGGAGAAGGTGCAGCTCTGTATTGTATAATAGGTACTTT
 
. : . : . : . : . : . :
rJMSF002I21+ AAAACGATTGGTTATGTCATGTAGGCAACAATTTGAGAGTAGTCTGTCNAGTTAACT
rJMSF024M11+ AAAACGA-TGGTTATGTCATGTAGGCAACAATTTGAGAGTAGTCTGTCGAGTTAACTTAG
rJMSF022C12+ AAAACGA-TGGTTATGTCANGTAGGCANCAATTTGAGANTAGTCTGTCGAGTTAACTTAG
                      ____________________________________________________________
consensus AAAACGA-TGGTTATGTCATGTAGGCAACAATTTGAGAGTAGTCTGTCGAGTTAACTTAG
 
. : . : . : . : . : . :
rJMSF024M11+ ATTACTTCTAAACTGTCCCAGATCTGTAATAGTGATGAGGTCTCAACATTGATCACAATT
rJMSF022C12+ ATTACTTNTAAACTGTCCCAGATCTGTAATAGTGATGAGGTCTCAACATTGATCACCATT
                      ____________________________________________________________
consensus ATTACTTCTAAACTGTCCCAGATCTGTAATAGTGATGAGGTCTCAACATTGATCACCATT
 
. : . : . : . : . : . :
rJMSF024M11+ TACAAATTTGTGTACTA
rJMSF022C12+ TACNAATTTGTGTACTATGATGAGAGAAACTAAAATGGGTTTANTTATGGGAGAAATTTC
                      ____________________________________________________________
consensus TACAAATTTGTGTACTATGATGAGAGAAACTAAAATGGGTTTANTTATGGGAGAAATTTC