Contig 001352:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS085A02+                                              ATATTGCAAACAGCTATGATATATG
JMFS081E06+                                              ATATTGCAAACAGCTATGATATATG
JMFN035K06+                      GGATAGAAAAAGCTAAGGGAATTTATATTGCAAACAGCTATGATATATG
rJMSF021F06-                                                                   ATG
                      ____________________________________________________________
consensus                        GGATAGAAAAAGCTAAGGGAATTTATATTGCAAACAGCTATGATATATG
 
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JMFS085A02+           GAATTCCAGGCAACATCTTGAAGTAAATGTTTAGAGACCCCAAACTAAAATACTACAGCA
JMFS081E06+           GAATTCCAGGCAACATCTTGAAGTAAATGTTTAGAGACCCCAAACTAAAATACTACAGCA
JMFN035K06+           GAATTCCAGGCAACATCTTGAAGTAAATGTTTAGAGACCCCAAACTAAAATACTACAGCA
rJMSF021F06-          GAATTCCAGGCNACATCTTGAAGTAAATGTTTAGAGACCCCAAACTAAAATACTACAGCA
                      ____________________________________________________________
consensus             GAATTCCAGGCAACATCTTGAAGTAAATGTTTAGAGACCCCAAACTAAAATACTACAGCA
 
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JMFS085A02+           ATACTTTTATTATTTAATAGATAGATAAGATAAATAGAATTATAGAAACCATCTCACATC
JMFS081E06+           ATACTTTTATTATTTAATAGATAGATAAGATAAATAGAATTATAGAAACCATCTCACATC
JMFN035K06+           ATACTTTTATTATTTAATAGATAGATAAGATAAATAGAATTATAGAAACCATCTCACATC
rJMSF021F06-          ATACTTTTATTATTTAATAGATAGATAAGATAAATAGAATTATAGAAACCATCTCACATC
                      ____________________________________________________________
consensus             ATACTTTTATTATTTAATAGATAGATAAGATAAATAGAATTATAGAAACCATCTCACATC
 
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JMFS085A02+           CTAGAGATCTGGAGAGGAACTGCATTTTCAAGAATTTCTTCCCTGGATGAGACCACCTGC
JMFS081E06+           CTAGAGATCTGGAGAGGAACTGCATTTTCAAGAATTTCTTCCCTGGATGAGACCACCTGC
JMFN035K06+           CTAGAGATCTGGAGAGGAACTGCATTTTCAAGAATTTCTTCCCTGGATGAGACCACCTGC
rJMSF021F06-          CTAGAGATCTGGAGAGGAACTGCATTTTCAAGAATTTCTTCCCTGGATGAGACCACCTGC
                      ____________________________________________________________
consensus             CTAGAGATCTGGAGAGGAACTGCATTTTCAAGAATTTCTTCCCTGGATGAGACCACCTGC
 
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JMFS085A02+           ATCATTTCCAGACTTCCAAGTCTCTTGATAAGATGGCGGCGACAGTTATCTGCAGCCATG
JMFS081E06+           ATCATTTCCAGACTTCCAAGTCTCTTGATAAGATGGCGGCGACAGTTATCTGCAGCCATG
JMFN035K06+           ATCATTTCCAGACTTCCAAGTCTCTTGATAAGATGGCGGCGACAGTTATCTGCAGCCATG
rJMSF021F06-          ATCATTTCCAGACTTCCAAGTCTCTTGATAAGATGGCGGCGACAGTTATCTGCAGCCATG
                      ____________________________________________________________
consensus             ATCATTTCCAGACTTCCAAGTCTCTTGATAAGATGGCGGCGACAGTTATCTGCAGCCATG
 
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JMFS085A02+           AGTCCGGCTGAATAGGCACCGTGAACAGATCCTTGATGCTCCATGCTAACAGCTTCACCT
JMFS081E06+           AGTCCGGCTGAATAGGCACCGTGAACAGATCCTTGATGCTCCATGCTAACAGCTTCACCT
JMFN035K06+           AGTCCGGCTGAATAGGCACCGTGAACAGATCCTTGATGCTCCATGCTAACAGCTTCACCT
rJMSF021F06-          AGTCCGGCTGAATAGGCACCGTGAACAGATCCTTGATGCTCCATGCTAACAGCTTCACCT
                      ____________________________________________________________
consensus             AGTCCGGCTGAATAGGCACCGTGAACAGATCCTTGATGCTCCATGCTAACAGCTTCACCT
 
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JMFS085A02+           CCAAAGAAAAGATTTCCTAAGGGAGCTCGGAGCCTGTCGTATACATCTGTTGGCTTACCA
JMFS081E06+           CCAAAGAAAAGATTTCCTAAGGGAGCTCGGAGCCTGTCGTATACATCTGTTGGCTTACCA
JMFN035K06+           CCAAAGAAAAGATTTCCTAAGGGAGCTCGGAGCCTGTCGTATACATCTGTTGGCTTACCA
rJMSF021F06-          CCAAAGAAAAGATTTCCTAAGGGAGCTCGGAGCCTGTCGTATACATCTGTTGGCTTACCA
                      ____________________________________________________________
consensus             CCAAAGAAAAGATTTCCTAAGGGAGCTCGGAGCCTGTCGTATACATCTGTTGGCTTACCA
 
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JMFS085A02+           ACTACATCATATGAATAACATCCGAGGGAATCGGGATCTGTTCCCCAGCGTGAAACAAGA
JMFS081E06+           ACTACATCATATGAATAACATCCGAGGGAATCGGGATCTGTTCCCCAGCGTGAAACAAGA
JMFN035K06+           ACTACATCATATGAATAACATCCGAGGGAATCGGGATCTGTTCCCCAGCGTGAAACAAGA
rJMSF021F06-          ACTACATCATATGAATAACATCCGAGGGAATCGGGATCTGTTCCCCAGCGTGAAACAAGA
                      ____________________________________________________________
consensus             ACTACATCATATGAATAACATCCGAGGGAATCGGGATCTGTTCCCCAGCGTGAAACAAGA
 
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JMFS085A02+           TACTGGAC                                                    
JMFS081E06+           TACTGGAC                                                    
JMFN035K06+           TACTGGACAGGTTCAGTTGCATTGGGAAACATCTTCTTCAGATGCAACATTGCAAACTTC
rJMSF021F06-          TACTGGACAGGTTCAGTTGCATTGGGAAACATCTTCTTCAGATGCAACATTGCAAACTTC
                      ____________________________________________________________
consensus             TACTGGACAGGTTCAGTTGCATTGGGAAACATCTTCTTCAGATGCAACATTGCAAACTTC
 
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JMFN035K06+           ACTGCACCCTCATCTGATAGCTTCTCAAGGTCATAGGCTAGGCTTCCAGCAGCCATATAC
rJMSF021F06-          ACTGCACCCTCATCTGATAGCTTCTCAAGGTCATAGGCTAGGCTTCCAGCAGCCATATAC
                      ____________________________________________________________
consensus             ACTGCACCCTCATCTGATAGCTTCTCAAGGTCATAGGCTAGGCTTCCAGCAGCCATATAC
 
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JMFN035K06+           ACAAGGACAGGATGTC                                            
rJMSF021F06-          ACAAGGACAGGATGTCCTGTTGCCTTGTGAAGATTGAGAAAATAACCGCAGGCATAAGAA
                      ____________________________________________________________
consensus             ACAAGGACAGGATGTCCTGTTGCCTTGTGAAGATTGAGAAAATAACCGCAGGCATAAGAA
 
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rJMSF021F06-          GTGGGTGCAACTACACCTAACAATTCCACATTTGGCCAAAAGACAGTGTCAAACCGCAGA
                      ____________________________________________________________
consensus             GTGGGTGCAACTACACCTAACAATTCCACATTTGGCCAAAAGACAGTGTCAAACCGCAGA
 
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rJMSF021F06-          GCAATTTTATTTTCATTGCCCATACAAAGATCCCTTATTGCAGAAACCTTCCATTCAGGC
                      ____________________________________________________________
consensus             GCAATTTTATTTTCATTGCCCATACAAAGATCCCTTATTGCAGAAACCTTCCATTCAGGC