Contig 001350:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017I18Sequence451003828 (4)736001350 (4)emb|CDP07546.1|1e-69unnamed protein product [Coffea canephora]
JMSF020H21Sequence704003828 (4)ref|XP_009761616.1|6e-15PREDICTED: probable protein phosphatase 2C 55 [Nicotiana sylvestris] ref|XP_0097740001350 (4)emb|CDP07546.1|5e-72unnamed protein product [Coffea canephora]
JMSF020O10Sequence670003828 (4)723001350 (4)emb|CDP07546.1|4e-72unnamed protein product [Coffea canephora]
JMSF041E03Sequence814003828 (4)ref|XP_009614756.1|2e-25PREDICTED: probable protein phosphatase 2C 55 [Nicotiana tomentosiformis]838001350 (4)emb|CDP07546.1|6e-74unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF041E03+            TTGTATCATTGCCCTTACAGATCAGCAGGGTCTCCATGCCATCAATTAGGCGATAGTG
                      ____________________________________________________________
consensus               TTGTATCATTGCCCTTACAGATCAGCAGGGTCTCCATGCCATCAATTAGGCGATAGTG
 
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rJMSF041E03+          GATTCATGGTGGTGAGGGATGGATGTACTGTTTCAGATCTCCTTCTCAGCAGCATGATTT
rJMSF020O10+                                                     TCTCAGCAGCATGATTT
rJMSF017I18+                                                     TCTCAGCAGCATGATTT
rJMSF020H21+                                                     TCTCAGCAGCATGATTT
                      ____________________________________________________________
consensus             GATTCATGGTGGTGAGGGATGGATGTACTGTTTCAGATCTCCTTCTCAGCAGCATGATTT
 
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rJMSF041E03+          CAATTTCACATATCAATTAGAATGTGGCAACGCTGGTGATCTCCCGAGCTCTGGACAGGT
rJMSF020O10+          CAATTTCACATATCAATTAGAATGTGGCAACGCTGGTGATCTCCCGAGCTCTGGACAGGT
rJMSF017I18+          CAATTTCACATATCAATTAGAATGTGGCAACGCTGGTGATCTCCCGAGCTCTGGACAGGT
rJMSF020H21+          CAATTTCACATATCAATTAGAATGTGGCAACGCTGGTGATCTCCCGAGCTCTGGACAGGT
                      ____________________________________________________________
consensus             CAATTTCACATATCAATTAGAATGTGGCAACGCTGGTGATCTCCCGAGCTCTGGACAGGT
 
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rJMSF041E03+          GTTCAAAGTTCCAGTTGCTCGAGGAGATGTCATAATTGCTGGTACAGATGGCCTCTTTGA
rJMSF020O10+          GTTCAAAGTTCCAGTTGCTCGAGGAGATGTCATAATTGCTGGTACAGATGGCCTCTTTGA
rJMSF017I18+          GTTCAAAGTTCCAGNTGCTCGAGGAGATGTCATAATTGCTGGTACAGATGGCCTCTTTGA
rJMSF020H21+          GTTCAAAGTTCCAGTTGCTCGAGGAGATGTCATAATTGCTGGTACAGATGGCCTCTTTGA
                      ____________________________________________________________
consensus             GTTCAAAGTTCCAGTTGCTCGAGGAGATGTCATAATTGCTGGTACAGATGGCCTCTTTGA
 
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rJMSF041E03+          CAATCTCTATAACAGCGATATTACTGCAGTTGTGGTTCATGCTACAAGAGCTGGCTTAGG
rJMSF020O10+          CAATCTCTATAACAGCGATATTACTGCAGTTGTGGTTCATGCTACAAGAGCTGGCTTAGG
rJMSF017I18+          CAATCTCTATAACAGCGATATTACTGCAGTTGTGGTTCATGCTACAAGAGCTGGNTTAGG
rJMSF020H21+          CAATCTCTATAACAGCGATATTACTGCAGTTGTGGTTCATGCTACAAGAGCTGGCTTAGG
                      ____________________________________________________________
consensus             CAATCTCTATAACAGCGATATTACTGCAGTTGTGGTTCATGCTACAAGAGCTGGCTTAGG
 
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rJMSF041E03+          GCCACAGGTGACTGCTCAGAAGATAGCAGCATTGGCACGTCAGCGAGCACAGGATAAAAA
rJMSF020O10+          GCCACAGGTGACTGCTCAGAAGATAGCAGCATTGGCACGTCAGCGAGCACAGGATAAAAA
rJMSF017I18+          GCCACAGGTGNCTGCTCAGAAGATAGCAGCATTGGCACGTCAGCGAGCACAGGATAAAAA
rJMSF020H21+          GCCACAGGTGACTGCTCAGAAGATAGCAGCATTGGCACGTCAGCGAGCACAGGATAAAAA
                      ____________________________________________________________
consensus             GCCACAGGTGACTGCTCAGAAGATAGCAGCATTGGCACGTCAGCGAGCACAGGATAAAAA
 
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rJMSF041E03+          CAGGCAGACACCTTTCTCTACCGCAGCCCAAGAAGCCGGATTTCGTTATTATGGTGGCAA
rJMSF020O10+          CAGGCAGACACCTTTCTCTACCGCAGCCCAAGAAGCCGGATTTCGTTATTATGGTGGCAA
rJMSF017I18+          CAGGCAGACACCTTTCTCTACCGCAGCCCAAGAAGCCGGATTTCGTTATTATGGTGGCAA
rJMSF020H21+          CAGGCAGACACCTTTCTCTACCGCAGCCCAAGAAGCCGGATTTCGTTATTATGGTGGCAA
                      ____________________________________________________________
consensus             CAGGCAGACACCTTTCTCTACCGCAGCCCAAGAAGCCGGATTTCGTTATTATGGTGGCAA
 
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rJMSF041E03+          GCTGGATGACATTACCGTAGTAGTTTCTTATATTACCAGCGAGAACAATGAAAACTCGTC
rJMSF020O10+          GCTGGATGACATTACCGTAGTAGTTTCTTATATTACCAGCGAGAACAATGAAAACTCGTC
rJMSF017I18+          GCTGGATGACATTACCGTAGTAGTTTCTTATATTACCAGCGAGAACAATGAAAACTCGTC
rJMSF020H21+          GCTGGATGACATTACCGTAGTAGTTTCTTATATTACCAGCGAGAACAATGAAAACTCGTC
                      ____________________________________________________________
consensus             GCTGGATGACATTACCGTAGTAGTTTCTTATATTACCAGCGAGAACAATGAAAACTCGTC
 
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rJMSF041E03+          GGCATCACACAGATCCAGCTAGCAGTTCCCTTCCATCTGATGTGGGAAGCCAATGTTCCT
rJMSF020O10+          GGCATCACACAGATCCAGCTAGCAGTTCCCTTCCATCTGATGTGGGAAGCCAATGTTCCT
rJMSF017I18+          GGCATCACACAGATCCAGCTAGCAGTTCCCTTCCATCTGATGTGGGAAGCCAATGTTCCT
rJMSF020H21+          GGCATCACACAGATCCAGCTAGCAGTTCCCTTCCATCTGATGTGGGAAGCCAATGTTCCT
                      ____________________________________________________________
consensus             GGCATCACACAGATCCAGCTAGCAGTTCCCTTCCATCTGATGTGGGAAGCCAATGTTCCT
 
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rJMSF041E03+          TTTTAGCATTAAATCCAACTTTTGCAGTCTTTTTCACAATTCAGCAGCAGTGAAAACTGA
rJMSF020O10+          TTTTAGCATTAAATCCAACTTTTGCAGTCTTTTTCACAATTCAGCAGCAGTGAAAACTGA
rJMSF017I18+          TTTTAGCATTAAATCCAACTTTNGCAGTNTTTTTCACAATTCAGCAGCAGTGAAAACTGA
rJMSF020H21+          TTTTAGCATTAAATCCAACTTTTGCAGTCTTTTTCACAATTCAGCAGCAGTGAAAACTGA
                      ____________________________________________________________
consensus             TTTTAGCATTAAATCCAACTTTTGCAGTCTTTTTCACAATTCAGCAGCAGTGAAAACTGA
 
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rJMSF041E03+          AAACCTTAAAAAGTGTCTATATATGTGGGTGCTGATGATGATGAAATTGCAGTCTCTTGT
rJMSF020O10+          AAACCTTAAAAAGTGTCTATATATGTGGGTGCTGATGATGATGAAATTGCAGTCTCTTGT
rJMSF017I18+          AAACCTTAAAAAGTGTCTATATATGTGGGTGCTGATGATGATGAAATTGCAGTCTCTTGT
rJMSF020H21+          AAACCTTAAAAAGTGTCTATATATGTGGGTGCTGATGATGATGAAATTGCAGTCTCTTGT
                      ____________________________________________________________
consensus             AAACCTTAAAAAGTGTCTATATATGTGGGTGCTGATGATGATGAAATTGCAGTCTCTTGT
 
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rJMSF041E03+          ACATACACACTAGTTTTGGCAGTCTTTATTCCATTCTTGCCCCTCATTTTGTCTCCCATC
rJMSF020O10+          ACATACACACTAGTTTTGGCAGTCTTTATTCCATTCTTGCCCCTCATTTTGTCTCCCATC
rJMSF017I18+          ACATACACACTAGTTTTGGCAGTCTTTATTCCATTCTTGCCCCTCATTTTGTCTCCCATC
rJMSF020H21+          ACATACACACTAGTTTTGGCAGTCTTTATTCCATTCTTGCCCCTCATTTTGTCTCCCATC
                      ____________________________________________________________
consensus             ACATACACACTAGTTTTGGCAGTCTTTATTCCATTCTTGCCCCTCATTTTGTCTCCCATC
 
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rJMSF041E03+          TTCTCCTTTTCTTGGGTAGCAATGGTGGGGGGTAGTATTAGCAAGCAGAATATGTCTTTG
rJMSF020O10+          TTCTCCTTTTCTTGGGTAGCAATGGTGGGGGGTAGTATTAGCAAGCAGAATATGTCTTTG
rJMSF017I18+          TTCTCCTTTTCTTGGGTAGCAATGGTGGGGGGTAGTATTAGCAAGCAGAATANGTCTTTG
rJMSF020H21+          TTCTCCTTTTCTTGGGTAGCAATGGTGGGGGGTAGTATTAGCAAGCAGAATATGTCTTTG
                      ____________________________________________________________
consensus             TTCTCCTTTTCTTGGGTAGCAATGGTGGGGGGTAGTATTAGCAAGCAGAATATGTCTTTG
 
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rJMSF041E03+          TTTGATATTTTGTAGTACCAAAGATCAAGAACTGAGAACTTCCATGGTTCCATGCATGA 
rJMSF020O10+          TTTGATATTTTGTAGTACCAAAGATCAAGAACTGAGAACTTCC                 
rJMSF017I18+          TTTGATATTTNGTAGTACCAAAGATCAAGAACTGAGAACTTCCATGGTTCCATGCATGA 
rJMSF020H21+          TTTGATATTTTGTAGTACCAAAGATCAAGAACTGAGAACTTCCATGGTTCCATGCATGAT
                      ____________________________________________________________
consensus             TTTGATATTTTGTAGTACCAAAGATCAAGAACTGAGAACTTCCATGGTTCCATGCATGAT