Contig 001347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I21Sequence297006377 (2)ref|XP_004147450.1|3e-28PREDICTED: mannose-1-phosphate guanyltransferase alpha-like isoform 1 [Cucumis 300001347 (2)ref|XP_007032323.1|2e-10ADP-glucose pyrophosphorylase family protein isoform 2 [Theobroma cacao] gb|EOY
JMSF019L17Sequence578006377 (2)gb|AES74598.2|6e-79glucose-1-phosphate adenylyltransferase family protein [Medicago truncatula]797001347 (2)ref|XP_009781498.1|1e-102PREDICTED: mannose-1-phosphate guanyltransferase alpha-like isoform X3 [Nicotia

Alignment

This contig is upended


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rJMSF019L17+                                                    CCCCAGCTTGNAGCATTC
                      ____________________________________________________________
consensus                                                       CCCCAGCTTGNAGCATTC
 
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rJMSF019L17+          CAGTTGGCAACGAGGTCCCTGCCTAGAGATTTGTTAGGTTGGATCAAGATATCTTGTCAC
                      ____________________________________________________________
consensus             CAGTTGGCAACGAGGTCCCTGCCTAGAGATTTGTTAGGTTGGATCAAGATATCTTGTCAC
 
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rJMSF019L17+          CTCTTGCTGGAAAGAAGCAATTGTACACGTACGAGACAGTAGACTTCTGGGAACAGATCA
                      ____________________________________________________________
consensus             CTCTTGCTGGAAAGAAGCAATTGTACACGTACGAGACAGTAGACTTCTGGGAACAGATCA
 
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rJMSF019L17+          AGACTCCAGGCATGTCTTTGAAATGTTCCGCTTTGTATCTTAATCAATTCCGATACACCT
                      ____________________________________________________________
consensus             AGACTCCAGGCATGTCTTTGAAATGTTCCGCTTTGTATCTTAATCAATTCCGATACACCT
 
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rJMSF019L17+          CACCTGATCTCCTTGCTTTGGGAGATGGCACCAAGAATGCCACAATCGTCGGTGATGTTT
                      ____________________________________________________________
consensus             CACCTGATCTCCTTGCTTTGGGAGATGGCACCAAGAATGCCACAATCGTCGGTGATGTTT
 
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rJMSF019L17+          ACATTCATCCATCTGCAAAAGTACATCCAACAGCAAAGCTTGGACCTAATGTATCAATAT
                      ____________________________________________________________
consensus             ACATTCATCCATCTGCAAAAGTACATCCAACAGCAAAGCTTGGACCTAATGTATCAATAT
 
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rJMSF019L17+          CAGCAAATGTTCGCATAGCAGCTGGTGCAAGACTAATAAATTGCATTATCTTAGATGATG
                      ____________________________________________________________
consensus             CAGCAAATGTTCGCATAGCAGCTGGTGCAAGACTAATAAATTGCATTATCTTAGATGATG
 
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rJMSF019L17+          TGGAAATCAAGGATAATGCAGTTGTCATGTATGCTATTGTAGGATGGAAGTCATCCATCG
                      ____________________________________________________________
consensus             TGGAAATCAAGGATAATGCAGTTGTCATGTATGCTATTGTAGGATGGAAGTCATCCATCG
 
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rJMSF005I21+                    CCGAGTCCAGGCGGACGGAGATTACAACTCAAAACTGGGAGTTACAATCC
rJMSF019L17+          GGAAATGGTCCCGAGTCCAGGCGGACGGAGATTACAACTCAAAACTGGGAGTTACAATCC
                      ____________________________________________________________
consensus             GGAAATGGTCCCGAGTCCAGGCGGACGGAGATTACAACTCAAAACTGGGAGTTACAATCC
 
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rJMSF005I21+          TGGGGGAAGCCGTGGCTGTTGAAGATGAGGTCGTGGTTATAAACAGCATTANTNTTCCAC
rJMSF019L17+          TGGGGGAAGCCGTGGCTGTTGAAGATGAGGTCGTGGTTATAAACAGCATTATTCTTCCAC
                      ____________________________________________________________
consensus             TGGGGGAAGCCGTGGCTGTTGAAGATGAGGTCGTGGTTATAAACAGCATTATTCTTCCAC
 
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rJMSF005I21+          ACAAGACACTCAACATAAGCGTTCAAGACGACATCATTCTGTAAAATTTTGCGGATGAGA
rJMSF019L17+          ACAAGACACTCAACATAAGCGTTCAAGACGACATCATTCTGTAAAATTTTGCGGATGAGA
                      ____________________________________________________________
consensus             ACAAGACACTCAACATAAGCGTTCAAGACGACATCATTCTGTAAAATTTTGCGGATGAGA
 
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rJMSF005I21+          TCCTGGAAGCCTTTGAGGAGCTATATGAGCCTATNTATGTTTTCCATTTTCTCAGAATNT
rJMSF019L17+          TCCTGGAAGCCTTTGAGGAGCTATATGAGCCTATTTATGTTTTCCATTTTCTCAGAATTT
                      ____________________________________________________________
consensus             TCCTGGAAGCCTTTGAGGAGCTATATGAGCCTATTTATGTTTTCCATTTTCTCAGAATTT
 
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rJMSF005I21+          TNTATTGGCTGGATTCTTGTCACTAGTTTTCNTGAGATTAGAATGACAAATATGTACTTC
rJMSF019L17+          TTTATTGGCTGGATTCTTGTCACTAGTTTTC-TGAGATTAGAATGACAAATATGTACTTC
                      ____________________________________________________________
consensus             TTTATTGGCTGGATTCTTGTCACTAGTTTTCNTGAGATTAGAATGACAAATATGTACTTC
 
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rJMSF005I21+          TATTATATTT                                                  
rJMSF019L17+          TATTATATTTTTACACGACTTGGTTTTGTTAACTTCGGGGTCAACTCCAACTGAGTTAGT
                      ____________________________________________________________
consensus             TATTATATTTTTACACGACTTGGTTTTGTTAACTTCGGGGTCAACTCCAACTGAGTTAGT