| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF018J04 | Sequence | 234 | 003564 (11) | ref|XP_003604927.1| | 5e-05 | Serine carboxypeptidase [Medicago truncatula] | 789 | 001340 (3) | ref|XP_010320344.1| | 5e-47 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
| JMSF026K04 | Sequence | 672 | 003564 (11) | emb|CDP17658.1| | 7e-66 | unnamed protein product [Coffea canephora] | 764 | 001340 (3) | ref|XP_010320344.1| | 3e-47 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
| JMSF037P14 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 8e-66 | unnamed protein product [Coffea canephora] | 739 | 001340 (3) | ref|XP_010320344.1| | 2e-48 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF026K04+ ATTATATTTACCGAGC
rJMSF037P14+ TACATAGTTGNCAATGGATTCACAATTCCAGTTGACAACTTGTATTATATTTACCGAGC
rJMSF018J04+ TTACCGAGC
____________________________________________________________
consensus TACATAGTTGNCAATGGATTCACAATTCCAGTTGACAACTTGTATTATATTTACCGAGC
. : . : . : . : . : . :
rJMSF026K04+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
rJMSF037P14+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
rJMSF018J04+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
____________________________________________________________
consensus GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
. : . : . : . : . : . :
rJMSF026K04+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
rJMSF037P14+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
rJMSF018J04+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
____________________________________________________________
consensus GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
. : . : . : . : . : . :
rJMSF026K04+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
rJMSF037P14+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
rJMSF018J04+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
____________________________________________________________
consensus TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
. : . : . : . : . : . :
rJMSF026K04+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
rJMSF037P14+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
rJMSF018J04+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
____________________________________________________________
consensus TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
. : . : . : . : . : . :
rJMSF026K04+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
rJMSF037P14+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
rJMSF018J04+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
____________________________________________________________
consensus TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
. : . : . : . : . : . :
rJMSF026K04+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
rJMSF037P14+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
rJMSF018J04+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
____________________________________________________________
consensus TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
. : . : . : . : . : . :
rJMSF026K04+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
rJMSF037P14+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
rJMSF018J04+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
____________________________________________________________
consensus TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
. : . : . : . : . : . :
rJMSF026K04+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
rJMSF037P14+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
rJMSF018J04+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
____________________________________________________________
consensus TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
. : . : . : . : . : . :
rJMSF026K04+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF037P14+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF018J04+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
____________________________________________________________
consensus TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
. : . : . : . : . : . :
rJMSF026K04+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
rJMSF037P14+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
rJMSF018J04+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
____________________________________________________________
consensus CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
. : . : . : . : . : . :
rJMSF026K04+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAA
rJMSF037P14+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
rJMSF018J04+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
____________________________________________________________
consensus GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
. : . : . : . : . : . :
rJMSF037P14+ GGTAAAATCTATGT
rJMSF018J04+ GGTAAAATCTATGTTAAAAGTACTTTTCATTCAATAACACATTGTTGTACCTAAGTTTTA
____________________________________________________________
consensus GGTAAAATCTATGTTAAAAGTACTTTTCATTCAATAACACATTGTTGTACCTAAGTTTTA
. : . : . : . : . : . :
rJMSF018J04+ TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATGTTTTTGTAGTAGAATA
____________________________________________________________
consensus TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATGTTTTTGTAGTAGAATA