Contig 001338:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018C17Sequence473001338 (4)emb|CDO99879.1|2e-55unnamed protein product [Coffea canephora]794001338 (4)ref|XP_009763862.1|3e-45PREDICTED: acyl-CoA-binding domain-containing protein 5 isoform X2 [Nicotiana s
JMSF019N10Sequence457002384 (2)ref|XP_009623060.1|6e-83PREDICTED: rab9 effector protein with kelch motifs [Nicotiana tomentosiformis]799001338 (4)ref|XP_009763862.1|3e-69PREDICTED: acyl-CoA-binding domain-containing protein 5 isoform X2 [Nicotiana s
JMSF039N13Sequence682002384 (2)ref|XP_009623060.1|1e-130PREDICTED: rab9 effector protein with kelch motifs [Nicotiana tomentosiformis]877001338 (4)ref|XP_010312554.1|1e-92PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing protein 4 [S

Alignment

This contig is upended


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rJMSF039N13+                    TGAGTCGGTATGACATTTAATTACAATGATTGTATTGTTCTGGATAGGGT
                      ____________________________________________________________
consensus                       TGAGTCGGTATGACATTTAATTACAATGATTGTATTGTTCTGGATAGGGT
 
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JMSF018C17-                                                      GATGTTCGAGCATACCA
rJMSF039N13+          GTCTGTACAATGGAAACGCCTACCAACCAGCAATGAACCCCCTGATGTTCGAGCATACCA
rJMSF019N10+                                                CCCCTGATGTTCGAGCATACCA
                      ____________________________________________________________
consensus             GTCTGTACAATGGAAACGCCTACCAACCAGCAATGAACCCCCTGATGTTCGAGCATACCA
 
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JMSF018C17-           TTCAATGACATCCATTGGATCACGGTTTTTATTATTTGGTGGCTTTGATGGAAAATCAAC
rJMSF039N13+          TTCAATGACATCCATTGGATCACGGTTTTTATTATTTGGTGGCTTTGATGGAAAATCAAC
rJMSF019N10+          TTCAATGACATCCA-TGGATCACGGTTTTTATTATTTGGTGGCTTTGATGGAAAATCAAC
rJMSF018C17+                                                              AAATCAAC
                      ____________________________________________________________
consensus             TTCAATGACATCCATTGGATCACGGTTTTTATTATTTGGTGGCTTTGATGGAAAATCAAC
 
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JMSF018C17-           TTATGGTGATTTGTGGTGGTTAGTTCCAGAAGAGGATCCAGTTGCAAAGCGGGTAACACC
rJMSF039N13+          TTATGGTGATTTGTGGTGGTTAGTTCCAGAAGAGGATCCAGTTGCAAAGCGGGTAACACC
rJMSF019N10+          TTATGGTGATTTGTGGTGGTTAGTTCCAGAAGAGGATCCAGTTGCAAAGCGGGTAACACC
rJMSF018C17+          TTATGGTGATTTGTGGT-GNTAGTTCCAGAAGAGGATCCAGTTGCAAAGCGGGTAACACC
                      ____________________________________________________________
consensus             TTATGGTGATTTGTGGTGGTTAGTTCCAGAAGAGGATCCAGTTGCAAAGCGGGTAACACC
 
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JMSF018C17-           ATCTCCTCCCAAAGCTGTTTCTGAAAAACATGGTGCCACCATGGCACAAAGTAAATTCCT
rJMSF039N13+          ATCTCCTCCCAAAGCTGTTTCTGAAAAACATGGTGCCACCATGGCACAAAGTAAATTCCT
rJMSF019N10+          ATCTCCTCCCAAAGCTGTTTCTGAAAAACATGGTGCCACCATGGCACAAAGTAAATTCCT
rJMSF018C17+          ATCTCCTCCCAAAGCTGTTTCTGAAAAACATGGTGCCACCATGGCACAAAGTAAATTCCT
                      ____________________________________________________________
consensus             ATCTCCTCCCAAAGCTGTTTCTGAAAAACATGGTGCCACCATGGCACAAAGTAAATTCCT
 
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JMSF018C17-           TTCAGATGACAAGGAAAGTCATGTGGGAGAATCTTCTGTCTCAGAATTGCAGAAAAGATT
rJMSF039N13+          TTCAGATGACAAGGAAAGTCATGTGGGAGAATCTTCTGTCTCAGAATTGCAGAAAAGATT
rJMSF019N10+          TTCAGATGACAAGGAAAGTCATGTGGGAGAATCTTCTGTCTCAGAATTGCAGAAAAGATT
rJMSF018C17+          TTCAGATGACAAGGAAAGTCATGTGGGAGAATCTTCTGTCTCAGAATTGCAGAAAAGATT
                      ____________________________________________________________
consensus             TTCAGATGACAAGGAAAGTCATGTGGGAGAATCTTCTGTCTCAGAATTGCAGAAAAGATT
 
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JMSF018C17-           ACAAATTTCTGTTTCACTTTCAAATCCAAAGCCAACTATGGATGAGATGGAAGATAGGGA
rJMSF039N13+          ACAAATTTCTGTTTCACTTTCAAATCCAAAGCCAACTATGGATGAGATGGAAGATAGGGA
rJMSF019N10+          ACAAATTTCTGTTTCACTTTCAAATCCAAAGCCAACTATGGATGAGATGGAAGATAGGGA
rJMSF018C17+          ACAAATTTCTGTTTCACTTTCAAATCCAAAGCCAACTATGGATGAGATGGAAGATAGGGA
                      ____________________________________________________________
consensus             ACAAATTTCTGTTTCACTTTCAAATCCAAAGCCAACTATGGATGAGATGGAAGATAGGGA
 
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JMSF018C17-           ATTTATTGAACTAGCAACTCAGTTGGTCGGAGGGGCTCTTGACAGTAAACAGGCTATACG
rJMSF039N13+          ATTTATTGAACTAGCAACTCAGTTGGTCGGAGGGGCTCTTGACAGTAAACAGGCTATACG
rJMSF019N10+          ATTTATTGAACTAGCAACTCAGTTGGTCGGAGGGGCTCTTGACAGTAAACAGGCTATACG
rJMSF018C17+          ATTTATTGAACTAGCAACTCAGTTGGTCGGAGGGGCTCTTGACAGTAAACAGGCTATACG
                      ____________________________________________________________
consensus             ATTTATTGAACTAGCAACTCAGTTGGTCGGAGGGGCTCTTGACAGTAAACAGGCTATACG
 
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JMSF018C17-           AGTACTTCGTGAGCGCTGGAGGAATGCGTTGCCTAAATCAATTCAATTGAAGGAACTTAG
rJMSF039N13+          AGTACTTCGTGAGCGCTGGAGGAATGCGTTGCCTAAATCAATTCAATTGAAGGAACTTAG
rJMSF019N10+          AGTACTTCGTGAGCGCTGGAGGAATGCGTTGCCTAAATCAATTCAATTGAAGGAACTTAG
rJMSF018C17+          AGTACTTCGTGAGCGCTGGAGGAATGCGTTGCCTAAATCAATTCAATTGAAGGAACTTAG
                      ____________________________________________________________
consensus             AGTACTTCGTGAGCGCTGGAGGAATGCGTTGCCTAAATCAATTCAATTGAAGGAACTTAG
 
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JMSF018C17-           CCCGTTGCTGCGAGACTATCAACGTTTGGTCACCTT                        
rJMSF039N13+          CCCGTTGCTGCGAGACTATCAACGTTTGGTCACCTTAAATCAAAAAGAAAAGGTTGAATA
rJMSF019N10+          CCCGTTGCTGCGAGACTATCAACGTTTGGTCACCTTAAATCAAAAAGAAAAGGTTGAATA
rJMSF018C17+          CCCGTTGCTGCGAGACTATCAACGTTTGGTCACCTTAAATCAAAAAGAAAAGGTTGAATA
                      ____________________________________________________________
consensus             CCCGTTGCTGCGAGACTATCAACGTTTGGTCACCTTAAATCAAAAAGAAAAGGTTGAATA
 
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rJMSF039N13+          TTTTTTACAGTCTCTAGATCCCGGGTTTCTCAGAAAAGAGACATACCGATTCTATCATGT
rJMSF019N10+          TTTTTTACAGTCTCTAGATCCCGGGTTTCTCAGAAAAGAGACATACCGATTCTATCATGT
rJMSF018C17+          TTTTTTACAGTCTCTAGATCCCGGGTTTCTCAGAAAAGAGACATACCGATTCTATCATGT
                      ____________________________________________________________
consensus             TTTTTTACAGTCTCTAGATCCCGGGTTTCTCAGAAAAGAGACATACCGATTCTATCATGT
 
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rJMSF039N13+          CAGCAATGTTCAACAGTTGCGAATGGATGACATCCCACATTTGCTGGCAGAATACAGACA
rJMSF019N10+          CAGCAATGTTCAACAGTTGCGAATGGATGACATCCCACATTTGCTGGCAGAATACAGACA
rJMSF018C17+          CAGCAATGTTCAACAGTTGCGAATGGATGACATCCCACATTTGCTGGCAGAATACAGACA
                      ____________________________________________________________
consensus             CAGCAATGTTCAACAGTTGCGAATGGATGACATCCCACATTTGCTGGCAGAATACAGACA
 
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rJMSF039N13+          AGTATCCAGTGCAGGAGTAAATTAGATAGATGCATTGAATTCAAGATTTTATATGGTGTC
rJMSF019N10+          AGTATCCAGTGCAGGAGTAAATTAGATAGATGCATTGAATTCAAGATTTTATATGGTGTC
rJMSF018C17+          AGTATCCAGTGCAGGAGTAAATTAGATAGATGCATTGAATTCAAGATTTTATATGGTGTC
                      ____________________________________________________________
consensus             AGTATCCAGTGCAGGAGTAAATTAGATAGATGCATTGAATTCAAGATTTTATATGGTGTC
 
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rJMSF039N13+          GTGATACATGTAAACTCAAACTCCACATAAAAACATTTGCTGTATTATTTTCTTGTGCAT
rJMSF019N10+          GTGATACATGTAAACTCAAACTCCACATAAAAACATTTGCTGTATTATTTTCTTGTGCAT
rJMSF018C17+          GTGATACATGTAAACTCAAACTCCACATAAAAACATTTGCTGTATTATTTTCTTGTGCAT
                      ____________________________________________________________
consensus             GTGATACATGTAAACTCAAACTCCACATAAAAACATTTGCTGTATTATTTTCTTGTGCAT
 
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rJMSF039N13+          TTAGTCACGTCAAATTCTTTGATTTTGTGATTAAC                         
rJMSF019N10+          TTAGTCACGTCAAATTCTTTGATTTTGTGATTAAC                         
rJMSF018C17+          TTAGTCACGTCAAATTCTTTGATTTTGTGATTAACATATATACTGCTTGTAGTTTAAAAG
                      ____________________________________________________________
consensus             TTAGTCACGTCAAATTCTTTGATTTTGTGATTAACATATATACTGCTTGTAGTTTAAAAG
 
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rJMSF018C17+          AATAAGGCCAGAAACTTTGTTACCATACCAACACATAGATGGTTGAGAGTCGTTGCAGTT
                      ____________________________________________________________
consensus             AATAAGGCCAGAAACTTTGTTACCATACCAACACATAGATGGTTGAGAGTCGTTGCAGTT