Contig 001332:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016J10Sequence574001387 (33)gb|ACB05671.1|1e-36chloroplast ferredoxin [Capsicum annuum]725001332 (2)ref|XP_009606746.1|8e-98PREDICTED: alcohol dehydrogenase-like 4 [Nicotiana tomentosiformis]
JMSF018F13Sequence565003534 (2)ref|XP_009778935.1|2e-78PREDICTED: alcohol dehydrogenase-like 4 [Nicotiana sylvestris]800001332 (2)gb|EYU35623.1|5e-95hypothetical protein MIMGU_mgv1a010961mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018F13+ GGAGCTGTATGGAACACCGCC
                      ____________________________________________________________
consensus GGAGCTGTATGGAACACCGCC
 
. : . : . : . : . : . :
rJMSF018F13+ GACGTCGAGCCGGCGAAACGGTAGCCGTTTTTGCCCTGGGAGCAGTCGGTTTAGCGGTAG
rJMSF016J10+ GGTAG
                      ____________________________________________________________
consensus GACGTCGAGCCGGCGAAACGGTAGCCGTTTTTGCCCTGGGAGCAGTCGGTTTAGCGGTAG
 
. : . : . : . : . : . :
rJMSF018F13+ TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
rJMSF016J10+ TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
                      ____________________________________________________________
consensus TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
 
. : . : . : . : . : . :
rJMSF018F13+ AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
rJMSF016J10+ AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
                      ____________________________________________________________
consensus AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
 
. : . : . : . : . : . :
rJMSF018F13+ AGCCTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
rJMSF016J10+ AGCNTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
                      ____________________________________________________________
consensus AGCCTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
 
. : . : . : . : . : . :
rJMSF018F13+ GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
rJMSF016J10+ GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
                      ____________________________________________________________
consensus GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
 
. : . : . : . : . : . :
rJMSF018F13+ TGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
rJMSF016J10+ NGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
                      ____________________________________________________________
consensus TGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
 
. : . : . : . : . : . :
rJMSF018F13+ TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
rJMSF016J10+ TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
                      ____________________________________________________________
consensus TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
 
. : . : . : . : . : . :
rJMSF018F13+ TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
rJMSF016J10+ TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
                      ____________________________________________________________
consensus TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
 
. : . : . : . : . : . :
rJMSF018F13+ ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
rJMSF016J10+ ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
                      ____________________________________________________________
consensus ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
 
. : . : . : . : . : . :
rJMSF018F13+ TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
rJMSF016J10+ TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
                      ____________________________________________________________
consensus TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
 
. : . : . : . : . : . :
rJMSF018F13+ CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
rJMSF016J10+ CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
                      ____________________________________________________________
consensus CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
 
. : . : . : . : . : . :
rJMSF018F13+ ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
rJMSF016J10+ ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
                      ____________________________________________________________
consensus ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
 
. : . : . : . : . : . :
rJMSF018F13+ TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGAT
rJMSF016J10+ TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGATT
                      ____________________________________________________________
consensus TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGATT