Contig 001332:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018F13+                                                 GGAGCTGTATGGAACACCGCC
                      ____________________________________________________________
consensus                                                    GGAGCTGTATGGAACACCGCC
 
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rJMSF018F13+          GACGTCGAGCCGGCGAAACGGTAGCCGTTTTTGCCCTGGGAGCAGTCGGTTTAGCGGTAG
rJMSF016J10+                                                                 GGTAG
                      ____________________________________________________________
consensus             GACGTCGAGCCGGCGAAACGGTAGCCGTTTTTGCCCTGGGAGCAGTCGGTTTAGCGGTAG
 
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rJMSF018F13+          TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
rJMSF016J10+          TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
                      ____________________________________________________________
consensus             TAGAAGGTGCGCGAACTAGAGGTGCGTCAAGAATTATTGGAGTTGACATTAACGCTGAGA
 
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rJMSF018F13+          AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
rJMSF016J10+          AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
                      ____________________________________________________________
consensus             AATGTATCAAAGGTAAAGCAATTGGAATTACGGACTTTATAAACCCTAAGGAACTTGACA
 
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rJMSF018F13+          AGCCTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
rJMSF016J10+          AGCNTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
                      ____________________________________________________________
consensus             AGCCTATTCACGAGAAAATTCGGGAAATGACAGAAGGAGGGGTGCATTATAGCTTTGAGT
 
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rJMSF018F13+          GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
rJMSF016J10+          GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
                      ____________________________________________________________
consensus             GCACGGGAAACTTGGATGTTCTCCGCGAAGCGTTTTTGTCAACCAGCGACGGTTGGGGGT
 
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rJMSF018F13+          TGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
rJMSF016J10+          NGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
                      ____________________________________________________________
consensus             TGACGGTGATTCTGGGAATCCATCCGAGCCCACGGCTGCTGCCGCTGCACCCAATGGAGC
 
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rJMSF018F13+          TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
rJMSF016J10+          TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
                      ____________________________________________________________
consensus             TGTTCGACGGGCGGCGAATGGTGGCGTCGATTTTCGGGGACTTCAAAGGGAAATCGCAGC
 
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rJMSF018F13+          TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
rJMSF016J10+          TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
                      ____________________________________________________________
consensus             TGCCGTTGTTCGCAAAGCAGTGCATGGCAGGGGAGGTAAATCTGGACGAGTTCATAACTC
 
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rJMSF018F13+          ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
rJMSF016J10+          ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
                      ____________________________________________________________
consensus             ACGAGATGCCCTTTAGCCGCATCAATGATGCCTTCCAGCTGCTCCTCGACGGCAAATCTT
 
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rJMSF018F13+          TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
rJMSF016J10+          TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
                      ____________________________________________________________
consensus             TGAGATGCCTTCTTCACTTTTGAGGTGTATGCATTCGCAATTTCGCATTCCTCCCTCCCT
 
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rJMSF018F13+          CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
rJMSF016J10+          CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
                      ____________________________________________________________
consensus             CCCGCTCCATCTTCGTATGCGCGCTCGCTGTTAATTGCTTTCTACATACTTATACTTATG
 
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rJMSF018F13+          ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
rJMSF016J10+          ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
                      ____________________________________________________________
consensus             ATATGATCGAATTGAAGATCGATGATGATCTGTACAACTCTACTCTACTTAGCTTTAATT
 
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rJMSF018F13+          TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGAT 
rJMSF016J10+          TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGATT
                      ____________________________________________________________
consensus             TCGATAAGCTAAGGCCATATGATATGCCTATATCTATATATAGTGTGTTTGGTTGCGATT