Contig 001331:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016F14Sequence596006435 (4)ref|XP_009787103.1|4e-51PREDICTED: tryptophan--tRNA ligase, mitochondrial isoform X2 [Nicotiana sylvest764001331 (2)gb|KDP34172.1|3e-92hypothetical protein JCGZ_07743 [Jatropha curcas]
JMSF052K12Sequence659006435 (4)ref|XP_004253104.1|2e-67PREDICTED: tryptophan--tRNA ligase, mitochondrial [Solanum lycopersicum]859001331 (2)ref|XP_007137248.1|7e-36hypothetical protein PHAVU_009G1117000g, partial [Phaseolus vulgaris] gb|ESW0924

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+                  AAATGATGCAANTTGCAGCNTTCTTTCCCAAATTACTCAGAAATTCCCACAT
                      ____________________________________________________________
consensus                     AAATGATGCAANTTGCAGCNTTCTTTCCCAAATTACTCAGAAATTCCCACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          ATTCCCTTGTTTGGTGTCTAGTTTTNCTTCAACTGCATAATGTTTTAGGAATTAATTTTT
                      ____________________________________________________________
consensus             ATTCCCTTGTTTGGTGTCTAGTTTTNCTTCAACTGCATAATGTTTTAGGAATTAATTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          GACCAGTTGCCTCAAAAGTTGTGCAATTAAAAGTGGCCAATTGGGATGAAATGGAGGTGA
                      ____________________________________________________________
consensus             GACCAGTTGCCTCAAAAGTTGTGCAATTAAAAGTGGCCAATTGGGATGAAATGGAGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          ACTAAATTGGATCAATTTTGCTTCCTTGAAAAGAATTTATTTTCTTCCACTAATACCAGT
                      ____________________________________________________________
consensus             ACTAAATTGGATCAATTTTGCTTCCTTGAAAAGAATTTATTTTCTTCCACTAATACCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          AATCAACTTATTGTGTGCTCATGTTACCTTATATTCTTTCACAATGGTAAATTGATTTAG
                      ____________________________________________________________
consensus             AATCAACTTATTGTGTGCTCATGTTACCTTATATTCTTTCACAATGGTAAATTGATTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          AAAGTATATTTTCCAATTGCCTAAACAACTTTTGCATTCTTGGAGCTTGATTACAATATG
                      ____________________________________________________________
consensus             AAAGTATATTTTCCAATTGCCTAAACAACTTTTGCATTCTTGGAGCTTGATTACAATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          TTATTCATAATAATTTTTATTACAGGAGGTTGCAGAGGAATGCCAAAATATGAATTGGGG
rJMSF016F14+                               ACAGGAGGTTGCAGAGGAATGCCAAAATATGAATTGGGG
                      ____________________________________________________________
consensus             TTATTCATAATAATTTTTATTACAGGAGGTTGCAGAGGAATGCCAAAATATGAATTGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          AACATTTAAACCCTTGCTTACAGATGCTTTAGTTGCACATCTACATCCTATCCAGGTTCG
rJMSF016F14+          AACATTTAAACCCTTGCTTACAGATGCTTTAGTTGCACATCTACATCCTATCCAGGTTCG
                      ____________________________________________________________
consensus             AACATTTAAACCCTTGCTTACAGATGCTTTAGTTGCACATCTACATCCTATCCAGGTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          TTATGAGGAAATAATGTCAGATACTACTTATTTGGACGAAGTTTTGGTCAAGGGTGCTAG
rJMSF016F14+          TTATGAGGAAATAATGTCAGATACTACTTATTTGGACGAAGTTTTGGTCAAGGGTGCTAG
                      ____________________________________________________________
consensus             TTATGAGGAAATAATGTCAGATACTACTTATTTGGACGAAGTTTTGGTCAAGGGTGCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          AAAAGCATCAGATGTTGCAAATGTTACTCTCAATAATGTGTACGAGGCAATGGGATTCTT
rJMSF016F14+          AAAAGCATCAGATGTTGCAAATGTTACTCTCAATAATGTGTACGAGGCAATGGGATTCTT
                      ____________________________________________________________
consensus             AAAAGCATCAGATGTTGCAAATGTTACTCTCAATAATGTGTACGAGGCAATGGGATTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          GCGAAGACAATAATCCATGCTGTATGAATAATCTGATAAGAAAGGTGCCTGCAATAACAA
rJMSF016F14+          GCGAAGACAATAATCCATGCTGTATGAATAATCTGATAAGAAAGGTGCCTGCAATAACAA
                      ____________________________________________________________
consensus             GCGAAGACAATAATCCATGCTGTATGAATAATCTGATAAGAAAGGTGCCTGCAATAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          CCTTGATGATGCCTTACTGGTACACCCAATACTCTTTACAAGTCAAGTTATACCTGCCAG
rJMSF016F14+          CCTTGATGATGCCTTACTGGTACACCCAATACTCTTTACAAGTCAAGTTATACCTGCCAG
                      ____________________________________________________________
consensus             CCTTGATGATGCCTTACTGGTACACCCAATACTCTTTACAAGTCAAGTTATACCTGCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052K12+          TTCACCCTTGATGAAGATAGAGATATTCACAATAGTGGCA                    
rJMSF016F14+          TTCACCCTTGATGAAGATAGAGATATTCACAATAGTGGCACTTATTACTGCTTTTCTGTA
                      ____________________________________________________________
consensus             TTCACCCTTGATGAAGATAGAGATATTCACAATAGTGGCACTTATTACTGCTTTTCTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016F14+          CATTTGACTTCTTTTCAATGCATTATCCATATATTAAATAGCCAAGAAGCCCACCGGCAT
                      ____________________________________________________________
consensus             CATTTGACTTCTTTTCAATGCATTATCCATATATTAAATAGCCAAGAAGCCCACCGGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016F14+          TGAAGATTATCGAGACTTCTCTCAACTTATAATTCTAAATCGTGATCAAATACCAGGTGT
                      ____________________________________________________________
consensus             TGAAGATTATCGAGACTTCTCTCAACTTATAATTCTAAATCGTGATCAAATACCAGGTGT