Contig 001329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026A09Sequence547005980 (2)680001329 (5)emb|CBI26371.3|7e-54unnamed protein product [Vitis vinifera]
JMFS050A09Sequence608001329 (5)ref|XP_010650004.1|6e-48PREDICTED: uncharacterized protein LOC100244302 isoform X3 [Vitis vinifera]
JMFS101E05Sequence621001329 (5)ref|XP_009601025.1|4e-39PREDICTED: uncharacterized protein LOC104096366 isoform X1 [Nicotiana tomentosi
JMSF016A02Sequence474005980 (2)778001329 (5)ref|XP_009794185.1|202PREDICTED: uncharacterized protein LOC104240978 [Nicotiana sylvestris]
JMSF048F24Sequence755001329 (5)ref|XP_009794185.1|197PREDICTED: uncharacterized protein LOC104240978 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS101E05-                                                       TGACGCCTTTCTAGCA
JMFS050A09-                                                           GCCTTTCTAGCA
                      ____________________________________________________________
consensus                                                         TGACGCCTTTCTAGCA
 
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JMFS101E05-           AAGGAGGAAGGGACTTACAACATTATTGTCAATCACATTGGTCGCTGCAAAGAGAAATCT
JMFS050A09-           AAGGAGGAAGGGACTTACAACATTATTGTCAATCACATTGGTCGCTGCAAAGAGAAATCT
                      ____________________________________________________________
consensus             AAGGAGGAAGGGACTTACAACATTATTGTCAATCACATTGGTCGCTGCAAAGAGAAATCT
 
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JMFS101E05-           GGCATTGTCACCGACACTAATAACCTAGCACAAACTCGTGAATCAATCTCTGTTGAAAGA
JMFS050A09-           GGCATTGTCACCGACACTAATAACCTAGCACAAACTCGTGAATCAATCTCTGTTGAAAGA
                      ____________________________________________________________
consensus             GGCATTGTCACCGACACTAATAACCTAGCACAAACTCGTGAATCAATCTCTGTTGAAAGA
 
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JMFS101E05-           AAAGCGAGATCAAGTGATGTTCCAGAAAACGTGGCTTCAAATCCAGGAGAGAATGTGTTG
JMFS050A09-           AAAGCGAGATCAAGTGATGTTCCAGAAAACGTGGCTTCAAATCCAGGAGAGAATGTGTTG
rJMSF048F24+           AAGCGAGATTAAGTGATGTTCCAGAAAACGTGGCTTC-AATCCAGGAGAGAATGTGTTG
rJMSF016A02+           AAGCGAGATCAAGTGATGTTCCAGAAAACGTGGCTTCAAATCCAGGAGAGAATGTGTTG
                      ____________________________________________________________
consensus             AAAGCGAGATCAAGTGATGTTCCAGAAAACGTGGCTTCAAATCCAGGAGAGAATGTGTTG
 
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JMFS101E05-           AAAGGAACC-GGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
JMFS050A09-           AAAGGAACC-GGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
rJMFF026A09+                  CCGGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
rJMSF048F24+          AAAGGNACCNGGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
rJMSF016A02+          AAAGGAACC-GGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
                      ____________________________________________________________
consensus             AAAGGAACC-GGAACCGGTGTTTTACCTTTGTCCACTTTTGGTAGCAAAGAGACTGCAAG
 
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JMFS101E05-           TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
JMFS050A09-           TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
rJMFF026A09+          TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
rJMSF048F24+          TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
rJMSF016A02+          TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
                      ____________________________________________________________
consensus             TGTCCCGAAAGGAGCTTTTGATGCTATAAGGAGGCTTCGTTTGTCCCGTGGGGACATCCT
 
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JMFS101E05-           CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
JMFS050A09-           CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
rJMFF026A09+          CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
rJMSF048F24+          CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
rJMSF016A02+          CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
                      ____________________________________________________________
consensus             CAAATGGCTGGATTCAAATGCTCCATTGTCGCATTTAGATGGATTTTTCTTGCGCTTGAG
 
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JMFS101E05-           AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
JMFS050A09-           AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
rJMFF026A09+          AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
rJMSF048F24+          AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
rJMSF016A02+          AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
                      ____________________________________________________________
consensus             AATGGGCAAGTGGGAAGGTGCATTAGGAGGAACCGGCTACTACATTGCTCGCATAAGTGG
 
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JMFS101E05-           CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
JMFS050A09-           CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
rJMFF026A09+          CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
rJMSF048F24+          CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
rJMSF016A02+          CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
                      ____________________________________________________________
consensus             CATAACTGGGTCCCAACAAGAATATTCAGCAAAAGATGCTAAGAAGTGCATCTCAGTAAG
 
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JMFS101E05-           TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
JMFS050A09-           TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
rJMFF026A09+          TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
rJMSF048F24+          TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
rJMSF016A02+          TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
                      ____________________________________________________________
consensus             TATTTGTGGCATCACATGCTCTGTTGGAAGTCAGTACGTCTCCAACCACGACTTCTTGGA
 
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JMFS101E05-           GG                                                          
JMFS050A09-           GGATGAGCTCATGGCTTGGTGGTGACAAACCTCAGAAAGTGGAGGGCAGGTTCCATC   
rJMFF026A09+          GGATGAGCTCATGGCTTGGTGGTGCAAAACCTCAGAAAGTGGAGGGCAGGTTCCATCAGA
rJMSF048F24+          GGATGAGCTCATGGCTTGGTGGTGCAAAACCTCAGAAAGTGGAGGGCAGGTTCCATCAGA
rJMSF016A02+          GGATGAGCTCATGGCTTGGTGGTGCAAAACCTCAGAAAGTGGAGGGCAGGTTCCATCAGA
                      ____________________________________________________________
consensus             GGATGAGCTCATGGCTTGGTGGTGCAAAACCTCAGAAAGTGGAGGGCAGGTTCCATCAGA
 
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rJMFF026A09+          GGATGAACTAAGATTGAAAGTTGAACAGAAGATGAAGTTAGGCTTCTGAAATCCTGCACT
rJMSF048F24+          GGATGAACTAAGATTGAAAGTTGAACAGAAGATGAAGTTAGGCTTCTGAAATCCTGCACT
rJMSF016A02+          GGATGAACTAAGATTGAAAGTTGAACAGAAGATGAAGTTAGGCTTCTGAAATCCTGCACT
                      ____________________________________________________________
consensus             GGATGAACTAAGATTGAAAGTTGAACAGAAGATGAAGTTAGGCTTCTGAAATCCTGCACT
 
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rJMFF026A09+          GAACAACTTCTGCTCCAAAATTCCTCAAGATTTGCCATGAAAAGACCAAAGATCAAAGTT
rJMSF048F24+          GAACAACTTCTGCTCCAAAATTCCTCAAGATTTGCCATGAAAAGACCAAAGATCAAAGTT
rJMSF016A02+          GAACAACTTCTGCTCCAAAATTCCTCAAGATTTGCCATGAAAAGACCAAAGATCAAAGTT
                      ____________________________________________________________
consensus             GAACAACTTCTGCTCCAAAATTCCTCAAGATTTGCCATGAAAAGACCAAAGATCAAAGTT
 
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rJMFF026A09+          TTTTTGCATTTCCATTTCCCTATTGGTTTGTAATAAATCAAACATCTGGTTTGTTAATGT
rJMSF048F24+          TTTTTGCATTTCCATTTCCCTATTGGTTTGTAATAAATCAAACATCTGGTTTGTTAATGT
rJMSF016A02+          TTTTTGCATTTCCATTTCCCTATTGGTTTGTAATAAATCAAACATCTGGTTTGTTAATGT
                      ____________________________________________________________
consensus             TTTTTGCATTTCCATTTCCCTATTGGTTTGTAATAAATCAAACATCTGGTTTGTTAATGT
 
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rJMFF026A09+          CTCAAAGGTGACAACAGTCTGCAATATACACATACAAACATATATGTGAATACACACATA
rJMSF048F24+          CTCAAAGGTGACAACAGTCTGCAATATACACATACAAACATATATGTGAATACACACATA
rJMSF016A02+          CTCAAAGGTGACAACAGTCTGCAATATACACATACAAACATATATGTGAATACACACATA
                      ____________________________________________________________
consensus             CTCAAAGGTGACAACAGTCTGCAATATACACATACAAACATATATGTGAATACACACATA
 
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rJMFF026A09+          TATAGGAT                                                    
rJMSF048F24+          TATAGGAT                                                    
rJMSF016A02+          TATAGGATTGGAATCAAATAAAAACCACAAACTACTGTCTACTTGTGTATTGAAAATATA
                      ____________________________________________________________
consensus             TATAGGATTGGAATCAAATAAAAACCACAAACTACTGTCTACTTGTGTATTGAAAATATA