| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010H18 | Sequence | 578 | 007316 (2) | emb|CDP00784.1| | 5e-60 | unnamed protein product [Coffea canephora] | 729 | 001326 (3) | gb|EPS61269.1| | 2e-33 | hypothetical protein M569_13528, partial [Genlisea aurea] |
| JMSF015M22 | Sequence | 450 | 007316 (2) | ref|XP_009615526.1| | 127 | PREDICTED: uncharacterized protein LOC104108246 [Nicotiana tomentosiformis] | 741 | 001326 (3) | gb|EPS61269.1| | 1e-35 | hypothetical protein M569_13528, partial [Genlisea aurea] |
| JMSF046J22 | Sequence | 741 | 021181 | ref|XP_009598681.1| | 1e-165 | PREDICTED: uncharacterized protein At1g04910, partial [Nicotiana tomentosiformi | 768 | 001326 (3) | ref|XP_002284457.1| | 4e-38 | PREDICTED: uncharacterized protein At1g04910 [Vitis vinifera] emb|CBI26895.3| un |
This contig is upended
. : . : . : . : . : . :
rJMSF046J22+ CAAGGAGGGGAATTTCCCACATTTTC
____________________________________________________________
consensus CAAGGAGGGGAATTTCCCACATTTTC
. : . : . : . : . : . :
rJMSF046J22+ TACTAGGACACAGAAGATACTTGTATGGTGGGGCACTCTAGGACAATCCGGCCGGACAAG
rJMFF010H18+ CCGGACAAG
rJMSF015M22+ AGGACAATCCGGCCGGACAAG
____________________________________________________________
consensus TACTAGGACACAGAAGATACTTGTATGGTGGGGCACTCTAGGACAATCCGGCCGGACAAG
. : . : . : . : . : . :
rJMSF046J22+ AGGAAACTTGCACTATTATTTGATAATCCAAATATTGGGTGGAAGAGCTTCAAGCGCCAA
rJMFF010H18+ AGGAAACTTGCACTATTATTTGATAATCCAAATATTGGGTGGAAGAGCTTCAAGCGCCAA
rJMSF015M22+ AGGAAACTTGCACTATTATTTGATAATCCAAATATTGGGTGGAAGAGCTTCAAGCGCCAA
____________________________________________________________
consensus AGGAAACTTGCACTATTATTTGATAATCCAAATATTGGGTGGAAGAGCTTCAAGCGCCAA
. : . : . : . : . : . :
rJMSF046J22+ ATGCTAAATATGCGAGCGCATAGTGATTCGAAAGGGATTGAGCTGAAAAGGCCCAATGAT
rJMFF010H18+ ATGCTAAATATGCGAGCGCATAGTGATTCGAAAGGGATTGAGCTGAAAAGGCCCAATGAT
rJMSF015M22+ ATGCTAAATATGCGAGCGCATAGTGATTCGAAAGGGATTGAGCTGAAAAGGCCCAATGAT
____________________________________________________________
consensus ATGCTAAATATGCGAGCGCATAGTGATTCGAAAGGGATTGAGCTGAAAAGGCCCAATGAT
. : . : . : . : . : . :
rJMSF046J22+ TCTATATACTCCTTCCCTTGTCCAGACTGCATGTGCCGCCTTAATAAAACAAAAGATTCA
rJMFF010H18+ TCTATATACTCCTTCCCTTGTCCAGACTGCATGTGCCGCCTTAATAAAACAAAAGATTCA
rJMSF015M22+ TCTATATACTCCTTCCCTTGTCCAGACTGCATGTGCCGCCTTAATAAAACAAAAGATTCA
____________________________________________________________
consensus TCTATATACTCCTTCCCTTGTCCAGACTGCATGTGCCGCCTTAATAAAACAAAAGATTCA
. : . : . : . : . : . :
rJMSF046J22+ AAATTGTCGCCTGGGACGTGATCCCTGAAATGAAGGTTGTGTTTTTTGTTCCTGTAATTT
rJMFF010H18+ AAATTGTCGCCTGGGACGTGATCCCTGAAATGAAGGTTGTGTTTTTTGTTCCTGTAATTT
rJMSF015M22+ AAATTGTCGCCTGGGACGTGATCCCTGAAATGAAGGTTGTGTTTTTTGTTCCTGTAATTT
____________________________________________________________
consensus AAATTGTCGCCTGGGACGTGATCCCTGAAATGAAGGTTGTGTTTTTTGTTCCTGTAATTT
. : . : . : . : . : . :
rJMSF046J22+ GTGTGAACATCTAGTTGCTAACCCCAGTGATTCTTTCATTTTTTACCCTCTTTCTATTGG
rJMFF010H18+ GTGTGAACATCTAGTTGCTAACCCCAGTGATTCTTTCATTTTTTACCCTCTTTCTATTGG
rJMSF015M22+ GTGTGAACATCTAGTTGCTAACCCCAGTGATTCTTTCATTTTTTACCCTCTTTCTATTGG
____________________________________________________________
consensus GTGTGAACATCTAGTTGCTAACCCCAGTGATTCTTTCATTTTTTACCCTCTTTCTATTGG
. : . : . : . : . : . :
rJMSF046J22+ AGAGAGGTCAACTACTTGGATTTTGAAAGGCTTGCGTTCCTCCTCCGGGGTCGAATATGA
rJMFF010H18+ AGAGAGGTCAACTACTTGGATTTTGAAAGGCTTGCGTTCCTCCTCCGGGGTCGAATATGA
rJMSF015M22+ AGAGAGGTCAACTACTTGGATTTTGAAAGGCTTGCGTTCCTCCTCCGGGGTCGAATATGA
____________________________________________________________
consensus AGAGAGGTCAACTACTTGGATTTTGAAAGGCTTGCGTTCCTCCTCCGGGGTCGAATATGA
. : . : . : . : . : . :
rJMSF046J22+ TATTTTACGGGGCATGTCTCGATGGGTAACTGCTCTTCAAAGATGACGGAATTGAAGACG
rJMFF010H18+ TATTTTACGGGGCATGTCTCGATGGGTAACTGCTCTTCAAAGATGACGGAATTGAAGACG
rJMSF015M22+ TATTTTACGGGGCATGTCTCGATGGGTAACTGCTCTTCAAAGATGACGGAATTGAAGACG
____________________________________________________________
consensus TATTTTACGGGGCATGTCTCGATGGGTAACTGCTCTTCAAAGATGACGGAATTGAAGACG
. : . : . : . : . : . :
rJMSF046J22+ ATTTTCCAGTCCATAGTTACCCAGGTGTTGATAAATTTCACTTTATCTGACCAAGCTGAA
rJMFF010H18+ ATTTTCCAGTCCATAGTTACCCAGGTGTTGATAAATTTCACTTTATCTGACCAAGCTGAA
rJMSF015M22+ ATTTTCCAGTCCATAGTTACCCAGGTGTTGATAAATTTCACTTTATCTGACCAAGCTGAA
____________________________________________________________
consensus ATTTTCCAGTCCATAGTTACCCAGGTGTTGATAAATTTCACTTTATCTGACCAAGCTGAA
. : . : . : . : . : . :
rJMSF046J22+ AATTGACAACAGAACATACATTTTCCAGTTTCCACATTGGTTTTGCTGTAATTGTATTTT
rJMFF010H18+ AATTGACAACAGAACATACATTTTCCAGTTTCCACATTGGTTTTGCTGTAATTGTATTTT
rJMSF015M22+ AATTGACAACAGAACATACATTTTCCAGTTTCCACATTGGTTTTGCTGTAATTGTATTTT
____________________________________________________________
consensus AATTGACAACAGAACATACATTTTCCAGTTTCCACATTGGTTTTGCTGTAATTGTATTTT
. : . : . : . : . : . :
rJMSF046J22+ TGTACGTTTCTTGTTCAGTAGTATGTTAGACCATAGAAGAATGACGATGAAGAACAGTAT
rJMFF010H18+ TGTACGTTTCTTGTTCAGTAGTATGTTAGACCATAGAAGAATGACGATGAAGAACAGTAT
rJMSF015M22+ TGTACGTTTCTTGTTCAGTAGTATGTTAGACCATAGAAGAATGACGATGAAGAACAGTAT
____________________________________________________________
consensus TGTACGTTTCTTGTTCAGTAGTATGTTAGACCATAGAAGAATGACGATGAAGAACAGTAT
. : . : . : . : . : . :
rJMSF046J22+ AGGATTTTGAAAATGCTTGGGTTCCAAATTTTTATTTTTGGATACCCACCCTACCCTACC
rJMFF010H18+ AGGATTTTGAAAATGCTTGGGTTCCAAATTTTTATTTTTGGATACCCACCCTACCCTACC
rJMSF015M22+ AGGATTTTGAAAATGCTTGGGTTCCAAATTTTTATTTTTGGATACCCACCCTACCCTACC
____________________________________________________________
consensus AGGATTTTGAAAATGCTTGGGTTCCAAATTTTTATTTTTGGATACCCACCCTACCCTACC
. : . : . : . : . : . :
rJMSF046J22+ CTACCCTTTATGTGAAATTTAT
rJMFF010H18+ CTACCCTTTATGTGAAATTTATATTCCCAGAGGTTCCAACCTCCGGGACCAGGAT
rJMSF015M22+ CTACCCTTTATGTGAAATTTATATTCCCAGAGGTTCCAACCTCCGGGACCAGGATTGTTG
____________________________________________________________
consensus CTACCCTTTATGTGAAATTTATATTCCCAGAGGTTCCAACCTCCGGGACCAGGATTGTTG