Contig 001325:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN018L21Sequence609001325 (3)ref|XP_009625883.1|7e-54PREDICTED: inter alpha-trypsin inhibitor, heavy chain 4-like isoform X3 [Nicoti
JMFS029B02Sequence621001325 (3)ref|XP_009625883.1|1e-48PREDICTED: inter alpha-trypsin inhibitor, heavy chain 4-like isoform X3 [Nicoti
JMSF015K10Sequence566011962 (2)ref|XP_009625882.1|2e-74PREDICTED: von Willebrand factor A domain-containing protein DDB_G0285981-like 755001325 (3)ref|XP_009625888.1|6e-62PREDICTED: von Willebrand factor A domain-containing protein DDB_G0292028-like

Alignment

This contig is upended


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rJMSF015K10-                                   AGACTTCAAAAGAAAATTTAAAATTGTCATACATA
                      ____________________________________________________________
consensus                                      AGACTTCAAAAGAAAATTTAAAATTGTCATACATA
 
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JMFS029B02+                  TAAGCAAAAGGCAAGATACAATATAATTAATATCCGAGGTATTTTTACATACA
rJMSF015K10-          CACCTCTTAAGCAAAAGGCAAGATACAATATAATTAATATCCGAGGTATTTTTACATACA
                      ____________________________________________________________
consensus             CACCTCTTAAGCAAAAGGCAAGATACAATATAATTAATATCCGAGGTATTTTTACATACA
 
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JMFS029B02+           TTAGTGGGGCACATATTGTAGGTACAACATATTATTAGGGCCAGTCAGTAACATGCGGCA
JMFN018L21+                                           TATTAGGGCCAGTCAGTAACATGCGGCA
rJMSF015K10-          TTAGTGGGGCACATATTGTAGGTACAACATATTATTAGGGCCAGTCAGTAACATGCGGCA
                      ____________________________________________________________
consensus             TTAGTGGGGCACATATTGTAGGTACAACATATTATTAGGGCCAGTCAGTAACATGCGGCA
 
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JMFS029B02+           TTAGAGACGATATGATATACATTTTACAGTTACTGACAAAAGTCGCAGCATTCACAGATT
JMFN018L21+           TTAGAGACGATATGATATACATTTTACAGTTACTGACAAAAGTCGCAGCATTCACAGATT
rJMSF015K10-          TTAGAGACGATATGATATACATTTTACAGTTACTGACAAAAGTCGCAGCATTCACAGATT
                      ____________________________________________________________
consensus             TTAGAGACGATATGATATACATTTTACAGTTACTGACAAAAGTCGCAGCATTCACAGATT
 
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JMFS029B02+           TCACAGCAGACATTGATGCACTCGAAGCATGCAAGCGCTGTGCAGAGCTGTGTGAACGTA
JMFN018L21+           TCACAGCAGACATTGATGCACTCGAAGCATGCAAGCGCTGTGCAGAGCTGTGTGAACGTA
rJMSF015K10-          TCACAGCAGACATTGATGCACTCGAAGCATGCAAGCGCTGTGCAGAGCTGTGTGAACGTA
                      ____________________________________________________________
consensus             TCACAGCAGACATTGATGCACTCGAAGCATGCAAGCGCTGTGCAGAGCTGTGTGAACGTA
 
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JMFS029B02+           ACAGCACATCGGTCGCTGAGTTTGGAGCAGAACTGAATGAAGCACATGCAACAACAGCAG
JMFN018L21+           ACAGCACATCGGTCGCTGAGTTTGGAGCAGAACTGAATGAAGCACATGCAACAACAGCAG
rJMSF015K10-          ACAGCACATCGGTCGCTGAGTTTGGAGCAGAACTGAATGAAGCACATGCAACAACAGCAG
                      ____________________________________________________________
consensus             ACAGCACATCGGTCGCTGAGTTTGGAGCAGAACTGAATGAAGCACATGCAACAACAGCAG
 
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JMFS029B02+           TCTACCAGCTTACCGCAACAGTTTGCTGCAGCAGTGAATATTGCATCTGAAGTCTCGTGC
JMFN018L21+           TCTACCAGCTTACCGCAACAGTTTGCTGCAGCAGTGAATATTGCATCTGAAGTCTCGTGC
rJMSF015K10-          TCTACCAGCTTACCGCAACAGTTTGCTGCAGCAGTGAATATTGCATCTGAAGTCTCGTGC
                      ____________________________________________________________
consensus             TCTACCAGCTTACCGCAACAGTTTGCTGCAGCAGTGAATATTGCATCTGAAGTCTCGTGC
 
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JMFS029B02+           AGCTTGGGCTCGGCTGCTTCAGGGGGGAGATTATCAGCAGTGGCCTTTAAGTTGCCAAAG
JMFN018L21+           AGCTTGGGCTCGGCTGCTTCAGGGGGGAGATTATCAGCAGTGGCCTTTAAGTTGCCAAAG
rJMSF015K10-          AGCTTGGGCTCGGCTGCTTCAGGGGGGAGATTATCAGCAGTGGCCTTTAAGTTGCCAAAG
                      ____________________________________________________________
consensus             AGCTTGGGCTCGGCTGCTTCAGGGGGGAGATTATCAGCAGTGGCCTTTAAGTTGCCAAAG
 
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JMFS029B02+           CCTAGGCCTAGTTGTCGGAGGTATAAGATCTTCCTGACAGTCGAATCAGTCATCATCACC
JMFN018L21+           CCTAGGCCTAGTTGTCGGAGGTATAAGATCTTCCTGACAGTCGAATCAGTCATCATCACC
rJMSF015K10-          CCTAGGCCTAGTTGTCGGAGGTATAAGATCTTCCTGAAAGTCGAATCAGTCATCATCACC
                      ____________________________________________________________
consensus             CCTAGGCCTAGTTGTCGGAGGTATAAGATCTTCCTGACAGTCGAATCAGTCATCATCACC
 
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JMFS029B02+           TCTTTTAGTGTCTCCCGTTTGGAGATCTGCTTTCCTTTTTCAGACTCAACTAGAATCATT
JMFN018L21+           TCTTTTAGTGTCTCCCGTTTGGAGATCTGCTTTCCTTTTTCAGACTCAACTAGAATCATT
rJMSF015K10-          TCTTTTAGTGTCTCCCGTTTGGAGATCTGCTTTCCTTTTTCAGACTCAACTAGAATCATT
                      ____________________________________________________________
consensus             TCTTTTAGTGTCTCCCGTTTGGAGATCTGCTTTCCTTTTTCAGACTCAACTAGAATCATT
 
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JMFS029B02+           CTGGTATATTCAGAAGCCAAGCCTGTTTGCAAGCTTAGCCTGATGACCTTGTTCTCAAGT
JMFN018L21+           CTGGTATATTCAGAAGCCAAGCCTGTTTGCAAGCTTAGCCTGATGACCTTGTTCTCAAGT
rJMSF015K10-          CTGGTATATTCAGAAGCCAAGCCTGTTTGCAAGCTTAGCCTGATGACCTTGTTCTCAAGT
                      ____________________________________________________________
consensus             CTGGTATATTCAGAAGCCAAGCCTGTTTGCAAGCTTAGCCTGATGACCTTGTTCTCAAGT
 
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JMFS029B02+           TCTTTCTTCCCAGTCAACCATGCCTGAG                                
JMFN018L21+           TCTTTCTTCCCAGTCAACCATGCCTGAGCTGTTAGCATACTCATTTGTCTTCCGGAAAA 
rJMSF015K10-          TCTTTCTTCCCAGTCAACCATGCCTGAGCTGTTAGCATACTCATTTGTCTTCCGGAAAAT
                      ____________________________________________________________
consensus             TCTTTCTTCCCAGTCAACCATGCCTGAGCTGTTAGCATACTCATTTGTCTTCCGGAAAAT
 
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rJMSF015K10-          ACCCTTTCAAGAGGCATATCCATCACTTTGTGTACTTTCACACCAATCTCAAAATTGCTA
                      ____________________________________________________________
consensus             ACCCTTTCAAGAGGCATATCCATCACTTTGTGTACTTTCACACCAATCTCAAAATTGCTA