Contig 001322:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF048D12+                               ATGCATGCTGGTGCTCAGCACAAAGGTG-TTTCTCAAGG
rJMSF015D19+                        TAAGTTAATGCATGCTGGTGCTCAGCACAAAGGTGTTTTCTCAAGG
                      ____________________________________________________________
consensus                           TAAGTTAATGCATGCTGGTGCTCAGCACAAAGGTGTTTTCTCAAGG
 
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rJMSF048D12+          GTTGACTACCAGATTAAGNCCATTCTTGACTGGTGTCTCATCATTCAAGCACATCCTTGC
rJMSF015D19+          GTTGACTACCAGACTAAG-CCATCTTTGACTGGTGTCTCATCATTCAAGCACATCCTTGC
                      ____________________________________________________________
consensus             GTTGACTACCAGATTAAGNCCATTTTTGACTGGTGTCTCATCATTCAAGCACATCCTTGC
 
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rJMSF048D12+          CGAATTACCCCCAAGAGTTCACTCAGTGTACTACAGGGATAACATAGGGAACATTTCATC
rJMSF015D19+          CGAATTACCCCCAAGAGTTCACTCAGTGTACTACAGGGATAACATAGGGAACATTTCATC
                      ____________________________________________________________
consensus             CGAATTACCCCCAAGAGTTCACTCAGTGTACTACAGGGATAACATAGGGAACATTTCATC
 
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rJMSF048D12+          CTCTCGTTTACGTACAAGTGCGAAGAAGTCCGAGCTCTTAATTGAGCCACGATACCCGTT
rJMSF015D19+          CTCTCGTTTACGTACAAGTGCGAAGAAGTCCGAGCTCTTAATTGAGCCACGATACCCGTT
                      ____________________________________________________________
consensus             CTCTCGTTTACGTACAAGTGCGAAGAAGTCCGAGCTCTTAATTGAGCCACGATACCCGTT
 
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rJMSF048D12+          ATTTGGAGGCTGGAAAGCCACCTTTGTCATTGGATATGGGGTTCCATTGAATGATTTTCT
rJMSF015D19+          ATTTGGAGGCTGGAAAGCCACCTTTGTCATTGGATATGGGGTTCCATTGAATGATTTTCT
                      ____________________________________________________________
consensus             ATTTGGAGGCTGGAAAGCCACCTTTGTCATTGGATATGGGGTTCCATTGAATGATTTTCT
 
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rJMSF048D12+          TTATGAATCCACTAATGGTGATCGCTACCTAAATTATAGTTTTGGGTGCCCTCTTGCTGA
rJMSF015D19+          TTATGAATCCACTAATGGTGATCGCTACCTAAATTATAGTTTTGGGTGCCCTCTTGCTGA
                      ____________________________________________________________
consensus             TTATGAATCCACTAATGGTGATCGCTACCTAAATTATAGTTTTGGGTGCCCTCTTGCTGA
 
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rJMSF048D12+          GACTGTTGTTGATAAGCTGACAATCAAGGTGGTCCTGCCAGAGGGTTCCAAGAACCCATC
rJMSF015D19+          GACTGTTGTTGATAAGCTGACAATCAAGGTGGTCCTGCCAGAGGGTTCCAAGAACCCATC
                      ____________________________________________________________
consensus             GACTGTTGTTGATAAGCTGACAATCAAGGTGGTCCTGCCAGAGGGTTCCAAGAACCCATC
 
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rJMSF048D12+          TGCTGTGGTTCCTTTTCCTTTTGAACAGAGATTAGAGAAGAAGTACTCATACCTTGATGT
rJMSF015D19+          TGCTGTGGTTCCTTTTCCTTTTGAACAGAGATTAGAGAAGAAGTACTCATACCTTGATGT
                      ____________________________________________________________
consensus             TGCTGTGGTTCCTTTTCCTTTTGAACAGAGATTAGAGAAGAAGTACTCATACCTTGATGT
 
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rJMSF048D12+          TGTAGGAAGGACTGTGATAGTCCTGGAAAAGAAAAATGTAGTTCCTGAGCACAACCATCC
rJMSF015D19+          TGTAGGAAGGACTGTGATAGTCCTGGAAAAGAAAAATGTAGTTCCTGAGCACAACCATCC
                      ____________________________________________________________
consensus             TGTAGGAAGGACTGTGATAGTCCTGGAAAAGAAAAATGTAGTTCCTGAGCACAACCATCC
 
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rJMSF048D12+          TTTCCAGGTTTACTACCAGTTCAATCCAATTTTCATGCTTGCCGAGCCACTGATGTTGAT
rJMSF015D19+          TTTCCAGGTTTACTACCAGTTCAATCCAATTTTCATGCTTGCCGAGCCACTGATGTTGAT
                      ____________________________________________________________
consensus             TTTCCAGGTTTACTACCAGTTCAATCCAATTTTCATGCTTGCCGAGCCACTGATGTTGAT
 
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rJMSF048D12+          TGGTGCCTTTTTCCTCTTCTTTGTTGCTTGCACCACTTACCTGCAAATGGATCTCTCAAT
rJMSF015D19+          TGGTGCCTTTTTCCTCTTCTTTGTTGCTTGCACCACTTACCTGCAAATGGATCTCTCAAT
                      ____________________________________________________________
consensus             TGGTGCCTTTTTCCTCTTCTTTGTTGCTTGCACCACTTACCTGCAAATGGATCTCTCAAT
 
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rJMSF048D12+          TCGAAAATTCAAGCAAACATGACAGTAACGACTCTCAGGAGGTCCACTTATAAAACCTTG
rJMSF015D19+          TCGAAAATTCAAGCAAACATGACAGTAACGACTCTCAGGAGGTCCACTTATAAAACCTTG
                      ____________________________________________________________
consensus             TCGAAAATTCAAGCAAACATGACAGTAACGACTCTCAGGAGGTCCACTTATAAAACCTTG
 
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rJMSF048D12+          ATAGTATGACGTTGGAACTTCCACTAATCAAGGTAGAAGAAGATGTTGTGATTTGTGAAG
rJMSF015D19+          ATA--------TTGGAACTTCCACTAATCAAGGTAGAAGAAGATGTTGTGATTTGTGAAG
                      ____________________________________________________________
consensus             ATAGTATGACGTTGGAACTTCCACTAATCAAGGTAGAAGAAGATGTTGTGATTTGTGAAG
 
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rJMSF048D12+          TAGATGAATTTTTGGTCTCTCCATCCCCTCGTAGAATGAAACTCGAGAAAATCCGCAATT
rJMSF015D19+          TAGATGAATTTTTGGTCTCTCCATCCCCTTGTAGAATGAAACTCGAGAAAATCCGCAATT
                      ____________________________________________________________
consensus             TAGATGAATTTTTGGTCTCTCCATCCCCTTGTAGAATGAAACTCGAGAAAATCCGCAATT