Contig 001319:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF014F14+                                     GCTGCAGCTTCTTGNACCTGGAAGATACATCTG
                      ____________________________________________________________
consensus                                        GCTGCAGCTTCTTGNACCTGGAAGATACATCTG
 
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rJMSF017M08+                        TGTATGGTTTGCTGATGCTGCTACCCCAGCAAAGTGCAGCCTTCAA
rJMSF014F14+          GTTGTTAAAAGCCNTGTATGGTTTGCTGATGCTGCTACCCCAGCAAAGTGCAGCCTTCAA
                      ____________________________________________________________
consensus             GTTGTTAAAAGCCNTGTATGGTTTGCTGATGCTGCTACCCCAGCAAAGTGCAGCCTTCAA
 
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rJMSF017M08+          AATTCTTCGGACCCGGTTGAAAACTGTGCCTGCATACTCTTTTAGTGGGGATCAACTTAG
rJMSF014F14+          AATTCTTCGGACCCGGTTGAAAACTGTGCCTGCATACTCTTTTAGTGGGGATCAACTTAG
                      ____________________________________________________________
consensus             AATTCTTCGGACCCGGTTGAAAACTGTGCCTGCATACTCTTTTAGTGGGGATCAACTTAG
 
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rJMSF017M08+          CCAAGCATCATCGGGGAATCCTTATTTTCAGACTAGTCATTCAAGGGGCGACTCACGCAC
rJMSF014F14+          CCAAGCATCATCGGGGAATCCTTATTTTCAGACTAGTCATTCAAGGGGCGACTCACGCAC
                      ____________________________________________________________
consensus             CCAAGCATCATCGGGGAATCCTTATTTTCAGACTAGTCATTCAAGGGGCGACTCACGCAC
 
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rJMSF017M08+          TTCAATTGATGGTAATTTTAGTGAAGATTCAAACGATATGCACAACGGAATAAATTTCTC
rJMSF014F14+          TTCAATTGATGGTAATTTTAGTGAAGATTCAAACGATATGCACAACGGAATAAATTTCTC
                      ____________________________________________________________
consensus             TTCAATTGATGGTAATTTTAGTGAAGATTCAAACGATATGCACAACGGAATAAATTTCTC
 
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rJMSF017M08+          CACAAGGCTGCAGCTGTTTGAACACATCCAACATATGCACCGTATGCATTCGAAGTCACA
rJMSF014F14+          CACAAGGCTGCAGCTGTTTGAACACATCCAACATATGCACCGTATGCATTCGAAGTCACA
                      ____________________________________________________________
consensus             CACAAGGCTGCAGCTGTTTGAACACATCCAACATATGCACCGTATGCATTCGAAGTCACA
 
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rJMSF017M08+          GGAGTCGTTCTCACGTTGCAGTCCTAATTCATCGTCAAAGAACGCCAATTCTGTTCAGGA
rJMSF014F14+          GGAGTCGTTCTCACGTTGCAGTCCTAATTCATCGTCAAAGAACGCCAATTCTGTTCAGGA
                      ____________________________________________________________
consensus             GGAGTCGTTCTCACGTTGCAGTCCTAATTCATCGTCAAAGAACGCCAATTCTGTTCAGGA
 
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rJMSF017M08+          GTTGCAAGGGACTGAAGACTCCAAACGACCTGACCCAAAGCCAGACTTGAATGGGCCGTC
rJMSF014F14+          GTTGCAAGGGACTGAAGACTCCAAACGACCTGACCCAAAGCCAGACTTGAATGGGCCGTC
                      ____________________________________________________________
consensus             GTTGCAAGGGACTGAAGACTCCAAACGACCTGACCCAAAGCCAGACTTGAATGGGCCGTC
 
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rJMSF017M08+          ATCAAGATCGTCACGCAAAGGCCCTGGACAGTTGCTGATTTGATTGCTTTGCTTTTGCTT
rJMSF014F14+          ATCAAGATCGTCACGCAAAGGCCCTGGACAGTTGCTGATTTGATTGCTTTGCTTTTGCTT
                      ____________________________________________________________
consensus             ATCAAGATCGTCACGCAAAGGCCCTGGACAGTTGCTGATTTGATTGCTTTGCTTTTGCTT
 
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rJMSF017M08+          GCTTGCACTCCTGATGGGAGGAGGGAGGAGGTCCAATTATACAAAAATTTTGGGGTATTC
rJMSF014F14+          GCTTGCACTCCTGATGGGAGGAGGGAGGAGGTCCAATTATACAAAAATTTTGGGGTATTC
                      ____________________________________________________________
consensus             GCTTGCACTCCTGATGGGAGGAGGGAGGAGGTCCAATTATACAAAAATTTTGGGGTATTC
 
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rJMSF017M08+          CAATTGAGTTTTGGTATAATTTGTAAATTGTATATCCTGACATTTGTCTTTTTGAACTTA
rJMSF014F14+          CAATTGAGTTTTGGTATAATTTGTAAATTGTATATCCTGACATTTGTCTTTTTGAACTTA
                      ____________________________________________________________
consensus             CAATTGAGTTTTGGTATAATTTGTAAATTGTATATCCTGACATTTGTCTTTTTGAACTTA
 
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rJMSF017M08+          TGGAAGGTTGAAATGGTGGGGAAATCATCAGGTATTGGTTATATAGAATTGTTCCCAAGC
rJMSF014F14+          TGGAAGGTTGAAATGGTGGGGAAATCATCAGGTATTGGTTATATAGAATTGTTCCCAAGC
                      ____________________________________________________________
consensus             TGGAAGGTTGAAATGGTGGGGAAATCATCAGGTATTGGTTATATAGAATTGTTCCCAAGC
 
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rJMSF017M08+          TATTTTTTTTTAAAATTTATTATTTTTCCCTAGTGAACAAGTAAGCTCATGTGGTTATGT
rJMSF014F14+          TATTTTTTTTTAAAATTTATTATTTTTCCCTAGTGAACAAGTAAGCTCATGTGGTTATGT
                      ____________________________________________________________
consensus             TATTTTTTTTTAAAATTTATTATTTTTCCCTAGTGAACAAGTAAGCTCATGTGGTTATGT
 
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rJMSF017M08+          TATTTTTATTGAAAACCATATGGGCAGTAGGTAGTTGTGTAGGACATTACATCCAAGTTT
rJMSF014F14+          TATTTTTATTGAAAACCATATGGGCAGTAGGTAGTTGTGTAGGACATTACATCCAAGTTT
                      ____________________________________________________________
consensus             TATTTTTATTGAAAACCATATGGGCAGTAGGTAGTTGTGTAGGACATTACATCCAAGTTT