| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022B15 | Sequence | 520 | 011940 (8) | ref|XP_004250408.1| | 5e-45 | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum] | 779 | 001314 (7) | ref|XP_009588864.1| | 4e-89 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] |
| JMFF037C02 | Sequence | 498 | 011940 (8) | ref|XP_004250408.1| | 1e-45 | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum] | 736 | 001314 (7) | ref|XP_009794279.1| | 1e-78 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
| JMSF012G13 | Sequence | 480 | 011940 (8) | ref|XP_009794279.1| | 7e-27 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] | 756 | 001314 (7) | ref|XP_009794279.1| | 1e-88 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
| JMSF013M10 | Sequence | 435 | 011940 (8) | ref|XP_009794279.1| | 2e-22 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] | 749 | 001314 (7) | ref|XP_009794279.1| | 2e-85 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
| JMSF013P07 | Sequence | 456 | 011940 (8) | ref|XP_004250408.1| | 2e-41 | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum] | 769 | 001314 (7) | ref|XP_009794279.1| | 1e-90 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
| JMSF026L05 | Sequence | 655 | 011940 (8) | ref|XP_009794279.1| | 3e-101 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] | 707 | 001314 (7) | ref|XP_009794279.1| | 1e-77 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
| JMSF032J10 | Sequence | 713 | 011940 (8) | ref|XP_009794279.1| | 4e-41 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] | 709 | 001314 (7) | ref|XP_009794279.1| | 2e-48 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF013M10+ TTTGATGTGAGAATACCTGCTACAAAGCGGAGTTGGCC
rJMSF012G13+ TTTGATGTGAGAATACTTGCTACAAAGCGGAGTTGGCC
rJMFF037C02+ TTGGCC
rJMFF022B15+ CGACCATTTGATGTGAGAATACTTGCTACAAAGCGGAGTTGGCC
rJMSF013P07+ GGCAAAACGTTTGCGACCATTTGATGTGAGAATACNTGCTACAAAGCGGAGTTGGCC
____________________________________________________________
consensus GGCAAAACGTTTGCGACCATTTGATGTGAGAATACTTGCTACAAAGCGGAGTTGGCC
. : . : . : . : . : . :
rJMSF013M10+ ATCACACATGGAGAATAATGGTGGGCGTGACCTGGTGGACGAAAAGGGTAGCCATGATGA
rJMSF012G13+ ATCACACATGGAGAATAATGGTGGGCGTGACCTGGTGGACGAAAAGGGTAGCCATGATGA
rJMFF037C02+ ATCACACATGGAGAATAATGGTGGGCGTGACNTGGTGGACGAAAAGGGTAGCCATGATGA
rJMFF022B15+ ATCACACATGGAGAATAATGGTGGGCGTGACCTGGTGGACGAAAAGGGTAGCCATGATGA
rJMSF026L05+ GACGAAAAGGGTAGCCATGATGA
rJMSF013P07+ ATCACACATGGAGAATAATGGTGGGCGTGACCTGGTGGACGAAAAGGGTAGCCATGATGA
____________________________________________________________
consensus ATCACACATGGAGAATAATGGTGGGCGTGACCTGGTGGACGAAAAGGGTAGCCATGATGA
. : . : . : . : . : . :
rJMSF013M10+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
rJMSF012G13+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
rJMFF037C02+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
rJMFF022B15+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
rJMSF026L05+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
rJMSF013P07+ TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
____________________________________________________________
consensus TATCTTGAAATTTGCGAGCAAAGCTGACATTGTTGTATGTTGCTTGTCCATGAATAGCGA
. : . : . : . : . : . :
rJMSF013M10+ AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
rJMSF012G13+ AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
rJMFF037C02+ AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
rJMFF022B15+ AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
rJMSF032J10+ AGGGTGCTATTCTAAT
rJMSF026L05+ AACGGCCGGGATAGTGAACAACGATTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
rJMSF013P07+ AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
____________________________________________________________
consensus AACGGCCAGGATAGTGAACAATGACTTCTTATCTTCAATGAGAAAGGGTGCTATTCTAAT
. : . : . : . : . : . :
rJMSF013M10+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
rJMSF012G13+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
rJMFF037C02+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
rJMFF022B15+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
rJMSF032J10+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCGGTTTTTAATCATCTGAAATGTGG
rJMSF026L05+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCGGTTTTTAATCATCTGAAATGTGG
rJMSF013P07+ TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
____________________________________________________________
consensus TAATATAGCTCGAGGTGGTCTATTGGACTATGATGCTGTTTTCAATCATCTGAAATGTGG
. : . : . : . : . : . :
rJMSF013M10+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
rJMSF012G13+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
rJMFF037C02+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
rJMFF022B15+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
rJMSF032J10+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCCGACAACGC
rJMSF026L05+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCCGACAACGC
rJMSF013P07+ ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
____________________________________________________________
consensus ACACTTGGGAGGTTTAGGAATCGATGTTGCTTGGACCGAACCATTTGATCCTGACGACGC
. : . : . : . : . : . :
rJMSF013M10+ CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
rJMSF012G13+ CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
rJMFF037C02+ CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
rJMFF022B15+ CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
rJMSF032J10+ CATTCTGAACTTCCAAAATGTCATAATCACCCCTCATGTTGCGGGTGTCACAGAATCCTC
rJMSF026L05+ CATTCTGAACTTCCAAAATGTCATAATCACCCCTCATGTTGCGGGTGTCACAGAATCCTC
rJMSF013P07+ CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
____________________________________________________________
consensus CATTCTGAACTTTCGAAATGTCATAATCACCCCCCATGTTGCGGGTGTCACAGAATCCTC
. : . : . : . : . : . :
rJMSF013M10+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
rJMSF012G13+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
rJMFF037C02+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
rJMFF022B15+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
rJMSF032J10+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCGCTTCAGCTTCATGCAGGGACGCC
rJMSF026L05+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCGCTTCAGCTTCATGCAGGGACGCC
rJMSF013P07+ GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
____________________________________________________________
consensus GTATAGGTACATGGCCAAGGTTGTCGGAGATGTTGCACTTCAGCTTCATGCAGGGACGCC
. : . : . : . : . : . :
rJMSF013M10+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
rJMSF012G13+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
rJMFF037C02+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
rJMFF022B15+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
rJMSF032J10+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCATTCCACCATTTGTGCCTACT
rJMSF026L05+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCATTCCACCATTTGTGCCTACT
rJMSF013P07+ TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
____________________________________________________________
consensus TTTAACCGGGATAGAAATCGTGAATTGATAGAACCCACCAT--------TTGTGCCTACT
. : . : . : . : . : . :
rJMSF013M10+ CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
rJMSF012G13+ CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
rJMFF037C02+ CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
rJMFF022B15+ CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
rJMSF032J10+ CTCTTATCACATTGGTTTATAAAGGCATTGCGTTTTCGTATTCAAGATTCTGCAGTTTTG
rJMSF026L05+ CTCTTATCACATTGGTTTATAAAGGCATTGCGTTTTCGTATTCAAGATTCTGCAGTTTTG
rJMSF013P07+ CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
____________________________________________________________
consensus CTCTCGTCACATTGGTTTATACAGGCGTTGGATTTTCGTTTTCAAGATTCTGCAGTTTTG
. : . : . : . : . : . :
rJMSF013M10+ CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAAAAACTAGGTTGAAACTTGCAGT
rJMSF012G13+ CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAGAAACTAGGTTGAAACTTGCAGT
rJMFF037C02+ CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAAA
rJMFF022B15+ CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAAA
rJMSF032J10+ CTGGAGAACTTGCTCGTGGCGTGGTGTTACAAGCGAAAA
rJMSF026L05+ CTGGAGAACTTGCTCGTGGCGTGGTGTTACAAGCGAAAA
rJMSF013P07+ CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAAAAACTAGGTTGAAACTTGCAGT
____________________________________________________________
consensus CTGGAGAAGTTGCTCGTGGCGTGGTGTTACAAGCGAAAAAACTAGGTTGAAACTTGCAGT
. : . : . : . : . : . :
rJMSF013M10+ ATCAATGACTCCATTAAAGAGCTTGAGGAAGATGGTGAAGAATGTATGTCTCATAAATAA
rJMSF012G13+ ATCAATGACTCCATTAAAGAGCTTGAGGAAGATGGTGAAGAATGTATGTCTCATAAATAA
rJMSF013P07+ ATCAATGACTCCATTAAAGGGCTTGAGGAAGATGGTGAAGAATGTATGTCTCATAAATAA
____________________________________________________________
consensus ATCAATGACTCCATTAAAGAGCTTGAGGAAGATGGTGAAGAATGTATGTCTCATAAATAA
. : . : . : . : . : . :
rJMSF013M10+ TGATTGAGGTTGTAGGTCTTATCCTATGTTAAAATTTGTACTATGATATACAATATGCT
rJMSF012G13+ TGATTGAGGTTGTAGGTCTTATCCTATGTTAAAATTTGTACTATGATATACAATATGCT
rJMSF013P07+ TAATTGAGGTTGTAGGTCTTATCCTATGTTAAAATTTGTACTATGATATACAATATGCTA
____________________________________________________________
consensus TGATTGAGGTTGTAGGTCTTATCCTATGTTAAAATTTGTACTATGATATACAATATGCTA