Contig 001306:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN006H22+                 GTTCACTTTTCCCGATTCGAGAAGGGCTCTTGAGAGAGTGAGGTGTGGAAGGAT
                      ____________________________________________________________
consensus                   GTTCACTTTTCCCGATTCGAGAAGGGCTCTTGAGAGAGTGAGGTGTGGAAGGAT
 
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JMFN006H22+           TTGTGGTTGAAGATAATTTATGTCGGCAAGGTCAGGTCTGGATTGGGTTCTGCATTTGGG
JMSF035N16+                                            AGGTCTGGATTGGGTTCTGCATTTGGG
                      ____________________________________________________________
consensus             TTGTGGTTGAAGATAATTTATGTCGGCAAGGTCAGGTCTGGATTGGGTTCTGCATTTGGG
 
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JMFN006H22+           GCTTTTTTGTTGAAGCTCTGGCTTGTTGTTTCTGTGATGGATTTGTGTGGATTTTGCAGG
JMSF035N16+           GCTTTTTTGTTGAAGCTCTGGCTTGTTGTTTCTGTGATGGATTTGTGTGGATTTTGCAGG
                      ____________________________________________________________
consensus             GCTTTTTTGTTGAAGCTCTGGCTTGTTGTTTCTGTGATGGATTTGTGTGGATTTTGCAGG
 
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JMFN006H22+           ACTTGTTCTACAAACGATGATCGAGCATTAGCTAGCCTTTTTCAGCTTGAGGACCAAACC
JMSF035N16+           ACTTGTTCTACAAACGATGATCGAGCATTAGCTAGCCTTTTTCAGCTTGAGGACCAAACC
                      ____________________________________________________________
consensus             ACTTGTTCTACAAACGATGATCGAGCATTAGCTAGCCTTTTTCAGCTTGAGGACCAAACC
 
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JMFN006H22+           CTAAAACCTTATCGCAATAGGCAAGCGCGGAAGGCGCAGCCGTGAACTCACACGCCGACG
JMSF035N16+           CTAAAACCTTATCGCAATAGGCAAGCGCGGAAGGCGCAGCCGTGAACTCACACGCCGACG
rJMSF012F21+                      CGCAATAGGCAAGCGCGGAAGGCGCAGCCGTGAACTCACACGCCGACG
                      ____________________________________________________________
consensus             CTAAAACCTTATCGCAATAGGCAAGCGCGGAAGGCGCAGCCGTGAACTCACACGCCGACG
 
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JMFN006H22+           TTGTTTCTTCAGCAGCCGTCGTGGATTGCCGCAATCCAACAGCCCCCAAACACAATCCTA
JMSF035N16+           TTGTTTCTTCAGCAGCCGTCGTGGATTGCCGCAATCCAACAGCCCCCAAACACAATCCTA
rJMSF012F21+          TTGTTTNTTCAGCAGCCGTCGTGGATTGCCGCAATCCAACAGCCCCCAAACACAATCCTA
                      ____________________________________________________________
consensus             TTGTTTCTTCAGCAGCCGTCGTGGATTGCCGCAATCCAACAGCCCCCAAACACAATCCTA
 
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JMFN006H22+           ACACCCTAATCGCTTCTCTCC                                       
JMSF035N16+           ACACCCTAATCGCTTCTCTCC                                       
rJMSF012F21+          ACACCCTAATCGCTTCTCTCCGGCAATCCAACAGCCCCCAAACACAATCCTAACACCCTA
                      ____________________________________________________________
consensus             ACACCCTAATCGCTTCTCTCCGGCAATCCAACAGCCCCCAAACACAATCCTAACACCCTA
 
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rJMSF012F21+          ATCGCTTCTCTCCGGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCTTC
                      ____________________________________________________________
consensus             ATCGCTTCTCTCCGGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCTTC
 
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rJMSF012F21+          TCTCCGGCAATCCACCAGCCCCCAAACACAATCCTAACACCCCAATCGCTTCTCTCCTCC
                      ____________________________________________________________
consensus             TCTCCGGCAATCCACCAGCCCCCAAACACAATCCTAACACCCCAATCGCTTCTCTCCTCC
 
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rJMSF012F21+          CCAGAACAACTGGCCGTTGCTGTTCCTCGCCGGAGAGTAGAGTGTCTTGGGGGATTCCAC
                      ____________________________________________________________
consensus             CCAGAACAACTGGCCGTTGCTGTTCCTCGCCGGAGAGTAGAGTGTCTTGGGGGATTCCAC
 
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rJMSF012F21+          ATAATATGGTGTACATTAACACTCACTGCCGGCGGATGAGGCAGATTACAAGAAGAACAC
                      ____________________________________________________________
consensus             ATAATATGGTGTACATTAACACTCACTGCCGGCGGATGAGGCAGATTACAAGAAGAACAC
 
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rJMSF012F21+          CTAAAAATACATCTTTGCCCTTCATTTTCACGGTCAATAGACGCTTTCACTGATGGAGGA
                      ____________________________________________________________
consensus             CTAAAAATACATCTTTGCCCTTCATTTTCACGGTCAATAGACGCTTTCACTGATGGAGGA
 
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rJMSF012F21+          TTAAAAGTGTCCAACGACCAATAAGCATGGCTACAAATTGGCAAATTTTATTATGGAGGA
                      ____________________________________________________________
consensus             TTAAAAGTGTCCAACGACCAATAAGCATGGCTACAAATTGGCAAATTTTATTATGGAGGA
 
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rJMSF012F21+          TGAAAAAATCTAGGACCAAAAATGGAATTAACTCTATAGTAAAGTAATGCTATCATGATT
                      ____________________________________________________________
consensus             TGAAAAAATCTAGGACCAAAAATGGAATTAACTCTATAGTAAAGTAATGCTATCATGATT
 
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rJMSF012F21+          AGGTTTGCTTCATTTTCTATTCATCCTAGCTAGTATNNGAGCCCGTGCGATGCACGGAAT
                      ____________________________________________________________
consensus             AGGTTTGCTTCATTTTCTATTCATCCTAGCTAGTATNNGAGCCCGTGCGATGCACGGAAT