Contig 001304:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019D08+                                       GGCACGAATTGGACGAGTCTCTGGGAACAAG
rJMSF011G16+                       ACAACGGTCGTTGGGAGGCACGAATTGGACGAGTCTCTGGGAACAAG
                      ____________________________________________________________
consensus                          ACAACGGTCGTTGGGAGGCACGAATTGGACGAGTCTCTGGGAACAAG
 
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rJMSF019D08+          TATCTTTACTTGGGGACTTTCAGCACTCAAGAGGAAGCGGCTACAGCGTATGATATGGCA
rJMSF011G16+          TATCTNTACNTGGGGACTTTCAGCACTCAAGAGGAAGCGGCTACAGCGTATGATATGGCA
                      ____________________________________________________________
consensus             TATCTTTACTTGGGGACTTTCAGCACTCAAGAGGAAGCGGCTACAGCGTATGATATGGCA
 
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rJMSF019D08+          GCGATCGAATACAGGGGTTCGAATGCAGTGACGAATTTTGACATCAGCGTTTATGCAGAT
rJMSF011G16+          GCGATCGAATACAGGGGTTCGAATGCAGTGACGAATTTTGACATCAGCGTTTATGCAGAT
                      ____________________________________________________________
consensus             GCGATCGAATACAGGGGTTCGAATGCAGTGACGAATTTTGACATCAGCGTTTATGCAGAT
 
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rJMSF019D08+          AAGCTGAAAGAAATCCGGGAAAGGAACGAGAGGGAACAGCAGGGAAACGATGAGTCCTCG
rJMSF011G16+          AAGCTGAAAGAAATCCGGGAAAGGAACGAGAGGGAACAGCAGGGAAACGATGAGTCCTCG
                      ____________________________________________________________
consensus             AAGCTGAAAGAAATCCGGGAAAGGAACGAGAGGGAACAGCAGGGAAACGATGAGTCCTCG
 
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rJMSF019D08+          TGTGAAGTTGAGTCCAAAGAACACAAAGAAGAAAGCCCGAAATGGAATCAAGAGGAAGAA
rJMSF011G16+          TGTGAAGTTGAGTCCAAAGAACACAAAGAAGAAAGCCCGAAATGGAATCAAGAGGAAGAA
                      ____________________________________________________________
consensus             TGTGAAGTTGAGTCCAAAGAACACAAAGAAGAAAGCCCGAAATGGAATCAAGAGGAAGAA
 
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rJMSF019D08+          TACTTTGTGGAAGAGATCGTTCCAAAGTTAGAGGGAATGGAACACACTAAACTCCCAAAA
rJMSF011G16+          TACTTTGTGGAAGAGATCGTTCCAAAGTTAGAGGGAATGGAACACACTAAACTCCCAAAA
                      ____________________________________________________________
consensus             TACTTTGTGGAAGAGATCGTTCCAAAGTTAGAGGGAATGGAACACACTAAACTCCCAAAA
 
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rJMSF019D08+          CTCGAATTTGCTCCTTCTTGTTCCTTGCCTATGATGACACCGATTGACCCTCTGGAGGAA
rJMSF011G16+          CTCGAATTTGCTCCTTCTTGTTCCTTGCCTATGATGACACCGATTGACCCTCTGGAGGAA
                      ____________________________________________________________
consensus             CTCGAATTTGCTCCTTCTTGTTCCTTGCCTATGATGACACCGATTGACCCTCTGGAGGAA
 
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rJMSF019D08+          GAGCCCGAAAGCTTTTGGAACGACTCGTTTCCAGTTCATGATCTTCATCTTGACGAGAAG
rJMSF011G16+          GAGCCCGAAAGCTTTTGGAACGACTCGTTTCCAGTTCATGATCTTCATCTGGACGAGAAG
                      ____________________________________________________________
consensus             GAGCCCGAAAGCTTTTGGAACGACTCGTTTCCAGTTCATGATCTTCATCTTGACGAGAAG
 
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rJMSF019D08+          CCTTCTTACCTGCTCGATTTCTTCAACGACTCCAGCATAGGAAACAGCCTCGATTTCCTT
rJMSF011G16+          CCTTCTTACCTGCTCGATTTCTTCAACGACTCCAGCATAGGAAACAGCCTCGATTTCCTT
                      ____________________________________________________________
consensus             CCTTCTTACCTGCTCGATTTCTTCAACGACTCCAGCATAGGAAACAGCCTCGATTTCCTT
 
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rJMSF019D08+          TTCGAGGAACCATCTAGTGGCAGCACACTCATCTCCGATGAATTTGAAGCTATGGTTAAC
rJMSF011G16+          TTCGAGGAACCATCTAGTGGCAGCACACTCATCTCCGATGAATTTGAAGCTATGGTTAAC
                      ____________________________________________________________
consensus             TTCGAGGAACCATCTAGTGGCAGCACACTCATCTCCGATGAATTTGAAGCTATGGTTAAC
 
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rJMSF019D08+          GAAGGACACAATGCCGCCTTTACTGCCCCTTCGCCTTCATCTAATTCGACAACATTGTCG
rJMSF011G16+          GAAGGACACAATGCCGCCTTTACTGCCCCTTCGCCTTCATCTAATTCGACAACATTGTCG
                      ____________________________________________________________
consensus             GAAGGACACAATGCCGCCTTTACTGCCCCTTCGCCTTCATCTAATTCGACAACATTGTCG
 
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rJMSF019D08+          GTATATGGAGAAATTTCTGCTGCTTCAAAGTTGTTAAACTGTTAGCAGTTTTTTTTAGGT
rJMSF011G16+          GTATATGGAGAAATTTCTGCTGCTTCAAAGTTGTTAAACTGTTAGCAGTTTTTTTTAGGT
                      ____________________________________________________________
consensus             GTATATGGAGAAATTTCTGCTGCTTCAAAGTTGTTAAACTGTTAGCAGTTTTTTTTAGGT
 
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rJMSF019D08+          TGTAGTTTAGAC                                                
rJMSF011G16+          TGTAGTTTAGACAGGAGACAAGGTATGATTGACTTGCATACACAGGTTTAGTGTTTTTAT
                      ____________________________________________________________
consensus             TGTAGTTTAGACAGGAGACAAGGTATGATTGACTTGCATACACAGGTTTAGTGTTTTTAT