| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026A20 | Sequence | 539 | 005053 (4) | ref|XP_004299037.1| | 5e-30 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A | 706 | 001300 (4) | ref|XP_006344171.1| | 1e-45 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A |
| JMFF028P22 | Sequence | 602 | 005053 (4) | ref|XP_011076286.1| | 2e-39 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A | 673 | 001300 (4) | ref|XP_006344171.1| | 4e-46 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A |
| JMSF011A08 | Sequence | 236 | 005053 (4) | 746 | 001300 (4) | ref|XP_006344171.1| | 3e-56 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A | |||
| JMSF019G23 | Sequence | 248 | 005053 (4) | 710 | 001300 (4) | ref|XP_006344171.1| | 8e-59 | PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A | |||
This contig is upended
. : . : . : . : . : . :
rJMFF028P22+ ATCGAATGGCCTCAACTGAAACATCG
rJMFF026A20+ AATATAGCCGGAGGCACCCCACCGCTTNTATCCAATNGAATGGCCTCAACTGAAACATCG
rJMSF019G23+ ATCGAATGGCCTCAACTGAAACATCG
rJMSF011A08+ GAATGGCCTCAACTGAAACATCG
____________________________________________________________
consensus AATATAGCCGGAGGCACCCCACCGCTTNTATCCAATCGAATGGCCTCAACTGAAACATCG
. : . : . : . : . : . :
rJMFF028P22+ ACCATTGCTTCAACTGCAGCAACTTTAGAGTCGTGTTACCAAGCTCCAGAGTCGCAGAAA
rJMFF026A20+ ACCATTGCTTCAACTGCAGCAACTTTAGAGTCGTGTTACCAAGCTCCAGAGTCGCAGAAA
rJMSF019G23+ ACCATTGCTTCAACTGCAGCAACTTTAGAGTCGTGTTACCAAGCTCCAGAGTCGCAGAAA
rJMSF011A08+ ACCATTGCTTCAACTGCAGCAACTTTAGAGTCGTGTTACCAAGCTCCAGAGTCGCAGAAA
____________________________________________________________
consensus ACCATTGCTTCAACTGCAGCAACTTTAGAGTCGTGTTACCAAGCTCCAGAGTCGCAGAAA
. : . : . : . : . : . :
rJMFF028P22+ GCGTTGAAGCCATCTCAAAAATGGGATATTTACTCGTATGGAGTGATCTTGTTGGAAATG
rJMFF026A20+ GCGTTGAAGCCATCTCAAAAATGGGATATTTACTCGTATGGAGTGATCTTGTTGGAAATG
rJMSF019G23+ GCGTTGAAGCCATCTCAAAAATGGGATATTTACTCGTATGGAGTGATCTTGTTGGAAATG
rJMSF011A08+ GCGTTGAAGCCATCTCAAAAATGGGATATTTACTCGTATGGAGTGATCTTGTTGGAAATG
____________________________________________________________
consensus GCGTTGAAGCCATCTCAAAAATGGGATATTTACTCGTATGGAGTGATCTTGTTGGAAATG
. : . : . : . : . : . :
rJMFF028P22+ ATCACGGGAAGGTCTCCAATAGTCCACGTGGGCTCCACCGAAATGGATATAGTTAACTGG
rJMFF026A20+ ATCACGGGAAGGTCTCCAATAGTCCACGTGGGCTCCACCGAAATGGATATAGTTAACTGG
rJMSF019G23+ ATCACGGGAAGGTCTCCAATAGTCCACGTGGGCTCCACCGAAATGGATATAGTTAACTGG
rJMSF011A08+ ATCACGGGAAGGTCTCCAATAGTCCACGTGGGCTCCACCGAAATGGATATAGTTAACTGG
____________________________________________________________
consensus ATCACGGGAAGGTCTCCAATAGTCCACGTGGGCTCCACCGAAATGGATATAGTTAACTGG
. : . : . : . : . : . :
rJMFF028P22+ CTTCACCTGTGCATCGACGAGAAGAAGCCACTTTCAGACGTGTTGGATCCATATCTAGCC
rJMFF026A20+ CTTCACCTGTGCATCGACGAGAAGAAGCCACTTTCAGACGTGTTGGATCCATATCTAGCC
rJMSF019G23+ CTTCACCTGTGCATCGACGAGAAGAAGCCACTTTCAGACGTGTTGGATCCATATCTAGCC
rJMSF011A08+ CTTCACCTGTGCATCGACGAGAAGAAGCCACTTTCAGACGTGTTGGATCCATATCTAGCC
____________________________________________________________
consensus CTTCACCTGTGCATCGACGAGAAGAAGCCACTTTCAGACGTGTTGGATCCATATCTAGCC
. : . : . : . : . : . :
rJMFF028P22+ GAAGATGCAG--AAAGAAGAGGAGATGATAGCAATTCTAAATATCGCAATGGCGTGTGTG
rJMFF026A20+ GAAGATGCAG--AAAGAAGAGGAGATGATAGCAATTCTAAATATCGCAATGGCGTGTGTG
rJMSF019G23+ GAAGATGCAGATAAAGAAGAGGAGATGATAGCAATTCTAAATATCGCAATGGCGTGTGTG
rJMSF011A08+ GAAGATGCAGATAAAGAAGAGGAGATGATAGCAATTCTAAATATCGCAATGGCGTGTGTG
____________________________________________________________
consensus GAAGATGCAGATAAAGAAGAGGAGATGATAGCAATTCTAAATATCGCAATGGCGTGTGTG
. : . : . : . : . : . :
rJMFF028P22+ CACAGCAGCCCCGAGAGGAGACCTTCAATGAGGTACATCTTGGAAGCCTTGGAAAGGCTA
rJMFF026A20+ CACAGCAGCCCCGAGAGGAGACCTTCAATGAGGTACATCTTGGAAGCCTTGGAAAGGCTA
rJMSF019G23+ CACAGCAGCCCCGAGAGGAGACCTTCAATGAGGTACATCTTGGAAGCCTTGGAAAGGCTA
rJMSF011A08+ CACAGCAGCCCCGAGAGGAGACCTTCAATGAGGTACATCTTGGAAGCCTTGGAAAGGCTA
____________________________________________________________
consensus CACAGCAGCCCCGAGAGGAGACCTTCAATGAGGTACATCTTGGAAGCCTTGGAAAGGCTA
. : . : . : . : . : . :
rJMFF028P22+ CCGGTGCCAACTGAACACTAATGCATTTACACACATCCCATAATCGGTTTCCTCGATCTT
rJMFF026A20+ CCGGTGCCAACTGAACACTAATGCATTTACACACATCCCATAATCGGTTTCCTCGATCTT
rJMSF019G23+ CCGGTGCCAACTGAACACTAATGCATTTACACACATCCCATAATCGGTTTCCTCGATCTT
rJMSF011A08+ CCGGTGCCAACTGAACACTAATGCATTTACACACATCCCATAATCGGTTTCCTCGATCTT
____________________________________________________________
consensus CCGGTGCCAACTGAACACTAATGCATTTACACACATCCCATAATCGGTTTCCTCGATCTT
. : . : . : . : . : . :
rJMFF028P22+ CAAGAGATTAAAGGTATGTCTACCTTAGGAGTTAATTGTCTAATCGTGACATATTACTGT
rJMFF026A20+ CAAGAGATTAAAGGTATGTCTACCTTAGGAGTTAATTGTCTAATCGTGACATATTACTGT
rJMSF019G23+ CAAGAGATTAAAGGTATGTCTACCTTAGGAGTTAATTGTCTAATCGTGACATATTACTGT
rJMSF011A08+ CAAGAGATTAAAGGTATGTCTACCTTAGGAGTTAATTGTCTAATCGTGACATATTACTGT
____________________________________________________________
consensus CAAGAGATTAAAGGTATGTCTACCTTAGGAGTTAATTGTCTAATCGTGACATATTACTGT
. : . : . : . : . : . :
rJMFF028P22+ TTCTTACTAGTGTAACTGTGAAAGGTGTCGCGACATACTTGTCCTCTTGTTGATTTGGAT
rJMFF026A20+ TTCTTACTAGTGTAACTGTGAAAGGTGTCGCGACATACTTGTCCTCTTGTTGATTTGGAT
rJMSF019G23+ TTCTTACTAGTGTAACTGTGAAAGGTGTCGCGACATACTTGTCCTCTTGTTGATTTGGAT
rJMSF011A08+ TTCTTACTAGTGTAACTGTGAAAGGTGTCGCGACATACTTGTCCTCTTGTTGATTTGGAT
____________________________________________________________
consensus TTCTTACTAGTGTAACTGTGAAAGGTGTCGCGACATACTTGTCCTCTTGTTGATTTGGAT
. : . : . : . : . : . :
rJMFF028P22+ TATATGATTCTCTTGTTTCTTTGTTGTTGCCTTTAGCTTTCTTTCATTCGGTAGTACATA
rJMFF026A20+ TATATGATTCTCTTGTTTCTTTGTTGTTGCCTTTAGCTTTCTTTCATTCGGTAGTACATA
rJMSF019G23+ TATATGATTCTCTTGTTTCTTTGTTGTTGCCTTTAGCTTTCTTTCATTCGGTAGTACATA
rJMSF011A08+ TATATGATTCTCTTGTTTCTTTGTTGTTGCCTTTAGCTTTCTTTCATTCGGTAGTACATA
____________________________________________________________
consensus TATATGATTCTCTTGTTTCTTTGTTGTTGCCTTTAGCTTTCTTTCATTCGGTAGTACATA
. : . : . : . : . : . :
rJMFF028P22+ GCGGGACAGCTGTAGTGAATTCGTTGCAACATGACCTGTACAAAATA
rJMFF026A20+ GCGGGACAGCTGTAGTGAATTCGTTGCAACACGACCTGTACAAAATA
rJMSF019G23+ GCGGGACAGCTGTAGTGAATTCGTTGCAACATGACCTGTACAAAATAATGTCGATGAAAT
rJMSF011A08+ GCGGGACAGCTGTAGTGAATTCGTTGCAACATGACCTGTACAAAATAATGTCGATGAAAT
____________________________________________________________
consensus GCGGGACAGCTGTAGTGAATTCGTTGCAACATGACCTGTACAAAATAATGTCGATGAAAT
. : . : . : . : . : . :
rJMSF019G23+ TATGGGATTTCCTGTGCAAGT
rJMSF011A08+ TATGGGATTTCCTGTGCAAGTTGGGTAGATAATACAAGCACTACCAACCAACCAATGATT
____________________________________________________________
consensus TATGGGATTTCCTGTGCAAGTTGGGTAGATAATACAAGCACTACCAACCAACCAATGATT