Contig 001299:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF010F11+               GGGCAAAGGTCAATGTTGTGGTAGCATCGGGTGAAAAATNTGCAGTAATCTTGGC
                      ____________________________________________________________
consensus                  GGGCAAAGGTCAATGTTGTGGTAGCATCGGGTGAAAAATNTGCAGTAATCTTGGC
 
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rJMSF037D22+                               GGCAGACAAGTTGANTGACAGTGCAGCTGAGTCGATGTA
rJMSF010F11+          ATCAAAAGGCGTTAAGATTGTGGCAGACAAGTTGATTGACAGTGCAGCTGAGTCGATGTA
                      ____________________________________________________________
consensus             ATCAAAAGGCGTTAAGATTGTGGCAGACAAGTTGATTGACAGTGCAGCTGAGTCGATGTA
 
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rJMSF037D22+          TGATNTGATAATCCTGCCGTGAGGAGAAGTTGGAGTTCAGCGGCTTCAAAGGTCGAGAAC
rJMSF010F11+          TGATCTGATAATCCTGCCGGGAGGAGAAGTTGGAGTTCAGCGGCTTCAAAGGTCGAGAAC
                      ____________________________________________________________
consensus             TGATCTGATAATCCTGCCGTGAGGAGAAGTTGGAGTTCAGCGGCTTCAAAGGTCGAGAAC
 
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rJMSF037D22+          TCTGAAGAAGTTGCTAAAGGAACAAGAATCGGGTGGAAGAACATTTGGTGCCATGTGCTC
rJMSF010F11+          TCTGAAGAAGTTGCTAAAGGAACAAGAATCGGGTGGAAGAACATTTGGTGCCATGTGCTC
                      ____________________________________________________________
consensus             TCTGAAGAAGTTGCTAAAGGAACAAGAATCGGGTGGAAGAACATTTGGTGCCATGTGCTC
 
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rJMSF037D22+          TTCATCACCTATAATACTGCAGAAACAGGGTTTGCTCAAGGCCAAAAAATCCGCTGCTCA
rJMSF010F11+          TTCATCACCTATAATACTGCAGAAACAGGGTTTGCTCAAGGCCAAAAAATCCGCTGCTCA
                      ____________________________________________________________
consensus             TTCATCACCTATAATACTGCAGAAACAGGGTTTGCTCAAGGCCAAAAAATCCGCTGCTCA
 
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rJMSF037D22+          TCCCTCCATCGCCATGAGCAAGCTCGACGATGTTCCAAATGGTGCCCGGGTAGTTGTTGA
rJMSF010F11+          TCCCTCCATCGCCATGAGCAAGCTCGACGATGTTCCAAATGGTGCCCGGGTAGTTGTTGA
                      ____________________________________________________________
consensus             TCCCTCCATCGCCATGAGCAAGCTCGACGATGTTCCAAATGGTGCCCGGGTAGTTGTTGA
 
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rJMSF037D22+          TGGTAAACTGATCACAAGCAAAGGGCTTTCTACTGCAATAGAATTTGGACTGGCCATTGT
rJMSF010F11+          TGGTAAACTGATCACAAGCAAAGGGCTTTCTACTGCAATAGAATTTGGACTGGCCATTGT
                      ____________________________________________________________
consensus             TGGTAAACTGATCACAAGCAAAGGGCTTTCTACTGCAATAGAATTTGGACTGGCCATTGT
 
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rJMSF037D22+          AAGCAAGTTCTTCGGGCATGCAAGAGCGAGGAGCGTAGCAGAAGGTCTTGTTTTTGAGTA
rJMSF010F11+          AAGCAAGTTCTTCGGGCATGCAAGAGCGAGGAGCGTAGCAGAAGGTCTTGTTTTTGAGTA
                      ____________________________________________________________
consensus             AAGCAAGTTCTTCGGGCATGCAAGAGCGAGGAGCGTAGCAGAAGGTCTTGTTTTTGAGTA
 
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rJMSF037D22+          CCCGAGGAACTAAGAATTCCAGTTCTTTAGCAGCAAAACCGTAAATGCCACTCAACAAGG
rJMSF010F11+          CCCGAGGAACTAAGAATTCCAGTTCTTTAGCAGCAAAACCGTAAATGCCACTCAACAAGG
                      ____________________________________________________________
consensus             CCCGAGGAACTAAGAATTCCAGTTCTTTAGCAGCAAAACCGTAAATGCCACTCAACAAGG
 
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rJMSF037D22+          CGCTCTCGAGGTCACTAAAGAAGATCAATCTAGCAACAGCGGCAACAACATTGGAAGCTA
rJMSF010F11+          CGCTCTCGAGGTCACTAAAGAAGATCAATCTAGCAACAGCGGCAACAACATTGGAAGCTA
                      ____________________________________________________________
consensus             CGCTCTCGAGGTCACTAAAGAAGATCAATCTAGCAACAGCGGCAACAACATTGGAAGCTA
 
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rJMSF037D22+          AGGTAAGAACCAAGTTCCATGTAAATTTTTGCCGATAAATACCTGGAACATGGCATCATC
rJMSF010F11+          AGGTAAGAACCAAGTTCCATGTAAATTTTTGCCGATAAATACCTGGAACATGGCATCATC
                      ____________________________________________________________
consensus             AGGTAAGAACCAAGTTCCATGTAAATTTTTGCCGATAAATACCTGGAACATGGCATCATC
 
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rJMSF037D22+          TTGCTCTCAACTAACTATTAGTGGCCAGTCGCCACCATTGTTGTCTGAAAGTATGCTCAC
rJMSF010F11+          TTGCTCTCAACTAACTATTAGTGGCCAGTCGCCACCATTGTTGTCTGAAAGTATGCTCAC
                      ____________________________________________________________
consensus             TTGCTCTCAACTAACTATTAGTGGCCAGTCGCCACCATTGTTGTCTGAAAGTATGCTCAC
 
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rJMSF037D22+          GAAACCGACAACAGGAACATCATCATGAAAATGTCATTGAGATATCTGTTGTAAT     
rJMSF010F11+          GAAACCGACAACAGGAACATCATCATGAAAATGTCATTGAGATATCTGTTGTAATTGAAC
                      ____________________________________________________________
consensus             GAAACCGACAACAGGAACATCATCATGAAAATGTCATTGAGATATCTGTTGTAATTGAAC