Contig 001296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS100A06Sequence638001296 (5)ref|XP_008337089.1|7e-47PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF010A21Sequence159001716 (18)734001296 (5)ref|XP_008337089.1|9e-40PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF016G24Sequence743001296 (5)ref|XP_008337089.1|5e-58PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF039A23Sequence685001716 (18)ref|XP_003592237.1|1e-73Serine carboxypeptidase II-3 [Medicago truncatula] ref|XP_003601334.1| Serine ca816001296 (5)gb|KDO84299.1|2e-66hypothetical protein CISIN_1g0114692mg [Citrus sinensis] gb|KDO84300.1| hypothet
JMSF051I14Sequence687001716 (18)ref|XP_002282331.1|3e-109PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]722001296 (5)ref|XP_010041326.1|7e-58PREDICTED: serine carboxypeptidase II-3-like [Eucalyptus grandis] gb|KCW44445.1|

Alignment

This contig is upended


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rJMSF039A23+                             CCCATGCTTTGATATCAGATGAAACCTTTTCAGTAATTTCC
                      ____________________________________________________________
consensus                                CCCATGCTTTGATATCAGATGAAACCTTTTCAGTAATTTCC
 
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rJMSF039A23+          AAGGAGTGCGACTACATTCATACCAACTTTTCTGCCACCTGCAAAATTTACCAAGCCAAA
                      ____________________________________________________________
consensus             AAGGAGTGCGACTACATTCATACCAACTTTTCTGCCACCTGCAAAATTTACCAAGCCAAA
 
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rJMSF039A23+          GCACTTATGGAGATGGGACCTGTNAACGTGACTAACATTTACACTAACTTCTGCTTTAAT
                      ____________________________________________________________
consensus             GCACTTATGGAGATGGGACCTGTNAACGTGACTAACATTTACACTAACTTCTGCTTTAAT
 
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rJMSF016G24+                                        GAAAATGATCCTTGCCCAGGCGATTCTGTC
rJMSF039A23+          GGTGTCGCAAAACCACAATATCATGGTTTGGAAAATGATCCTTGCTCAGGCAGTTATGTC
rJMSF051I14+                                            ATGATCCTTGCTCAGGCGGTTATATC
                      ____________________________________________________________
consensus             GGTGTCGCAAAACCACAATATCATGGTTTGGAAAATGATCCTTGCTCAGGCGGTTATGTC
 
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rJMSF016G24+          GTGTCTTACCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF039A23+          ACGTCTTACCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
JMFS100A06-             GTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF051I14+          GCGTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF010A21+                                                                TTTTGG
                      ____________________________________________________________
consensus             GCGTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
 
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rJMSF016G24+          ATAGGTTGCAGTCCAAAATTTGGATTGACTCATTGGAAAGACTCAGCAATAACAACCTTG
rJMSF039A23+          ATAGGTTGCAGTCCAAAATTTGGATTGAGTCATTGGAAAGACGCACCAATAACAACCTTG
JMFS100A06-           ATGGGTTGCAGTCCAAAATTTGGATTGAATCACTGGAAAGACTCAGTAATAACAACCTTG
rJMSF051I14+          ATGGGTTGCAGTCCAAAATTTGGATTGAATCACTGGAAAGACTCAGTAATAACAACCTTG
rJMSF010A21+          ATGGTTTGCAGTCCAAAAGTTGGATCGAGTAATTGGAAGAACTCAGCAATAACAACCTTG
                      ____________________________________________________________
consensus             ATGGGTTGCAGTCCAAAATTTGGATTGAATCATTGGAAAGACTCAGTAATAACAACCTTG
 
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rJMSF016G24+          CCCATAATCAAGCAGCTCATTGCAAACAAGATAAAAGTATGGCTATACAGTGGTGACGTA
rJMSF039A23+          CCCATAATCAAGCAGCTCATTGCAAACAAGATAAAAGTATGGATATACAGTGGTGACGTA
JMFS100A06-           CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
rJMSF051I14+          CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
rJMSF010A21+          CCCATAATCAAGCAGCTCATTGCAAAGAAGTTAAAAGTATGGATATACAGTGGTGACGTA
                      ____________________________________________________________
consensus             CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
 
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rJMSF016G24+          GATGCATTAGTTTCAGTGACATCAACCAGATATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF039A23+          GATGCATTAGTTTCAGTGACATCAACCAGGTATGCAATAAAAGCGATGAAACTTCCCGTC
JMFS100A06-           GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF051I14+          GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF010A21+          GATGCATTAGTTTCAGTAACATCAACCAGGTATGCAATAAAAGCCATGAAACTTCCTGTC
                      ____________________________________________________________
consensus             GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
 
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rJMSF016G24+          GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF039A23+          GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGCACGTGGAA
JMFS100A06-           GAGGTTGGTTGGCGGGCGTGGCATTCCGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF051I14+          GAGGTTGGTTGGCGGGCGTGGCATTCCGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF010A21+          GAGGTTGCTTGGCGGGCGTGGCATTCTGATGGCACCAAGGATGTGGGAGGGTACGTGGAA
                      ____________________________________________________________
consensus             GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
 
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rJMSF016G24+          GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGGGGGGCATTCAGCTCCAAGCTAC
rJMSF039A23+          GCGTACGAGGGATTGACACTGGTTACAATAAGAGGAGCTGGGCATTTAGCTCCTAGCTAC
JMFS100A06-           GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
rJMSF051I14+          GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
rJMSF010A21+          GCGTACAAGGGATTGACACTGGTTACAATAAGAGGAGCTGGGCATTCAGCTCCTAGCTAC
                      ____________________________________________________________
consensus             GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
 
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rJMSF016G24+          CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTCCCCCCTGCC
rJMSF039A23+          CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTCCCCCCTCCC
JMFS100A06-           CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
rJMSF051I14+          CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
rJMSF010A21+          CAACCAGAACGTGCATTGACTATGATTTCATCCTTCCTTCATGGGAAACTTCCCCCTGCC
                      ____________________________________________________________
consensus             CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
 
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rJMSF016G24+          TTCAGCTAG                                                   
rJMSF039A23+          TTCAGCTAG                                                   
JMFS100A06-           TTCAGCTAG                                                   
rJMSF051I14+          TTCAGCTAGAAGGTGTGATAGACACGCGGATACAATACA                     
rJMSF010A21+          TTCAGGTAAACCAAGATTACATCAAAACAAAATAGCTGTTCTGTCCCTAGTGTGTGGTGC
                      ____________________________________________________________
consensus             TTCAGCTAGACGGTGTTTTCGTCACGCGGATATAGTTGTTCTGTCCCTAGTGTGTGGTGC
 
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rJMSF010A21+          AATTACATGATATTCATATTTTGTGATGATTTCAAAGCACATTTATGCAAACTTGTATAT
                      ____________________________________________________________
consensus             AATTACATGATATTCATATTTTGTGATGATTTCAAAGCACATTTATGCAAACTTGTATAT
 
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rJMSF010A21+          TCACAAACAAGGGACCATACCTTTATTGATGCAGCAAGAAGGAAGCTAAGCTGAAAGTGA
                      ____________________________________________________________
consensus             TCACAAACAAGGGACCATACCTTTATTGATGCAGCAAGAAGGAAGCTAAGCTGAAAGTGA
 
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rJMSF010A21+          TACTTCCATTTTGTTTTTGCAGCTAGGTGTGATAGAAACGAAAACAAACTCGTGGCAACT
                      ____________________________________________________________
consensus             TACTTCCATTTTGTTTTTGCAGCTAGGTGTGATAGAAACGAAAACAAACTCGTGGCAACT
 
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rJMSF010A21+          GCGACCTACTGATTTCCATAGTGGCAACTGTTCAGCCACATGCTAATAAATATTACCTCT
                      ____________________________________________________________
consensus             GCGACCTACTGATTTCCATAGTGGCAACTGTTCAGCCACATGCTAATAAATATTACCTCT
 
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rJMSF010A21+          ATATCAAGAAGATGCTGAGAAAAAGCTGTATGTAGTTAAACAGCCCTACAAATGCACCAA
                      ____________________________________________________________
consensus             ATATCAAGAAGATGCTGAGAAAAAGCTGTATGTAGTTAAACAGCCCTACAAATGCACCAA