Contig 001296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS100A06Sequence638001296 (5)ref|XP_008337089.1|7e-47PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF010A21Sequence159001716 (18)734001296 (5)ref|XP_008337089.1|9e-40PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF016G24Sequence743001296 (5)ref|XP_008337089.1|5e-58PREDICTED: serine carboxypeptidase II-3-like [Malus domestica]
JMSF039A23Sequence685001716 (18)ref|XP_003592237.1|1e-73Serine carboxypeptidase II-3 [Medicago truncatula] ref|XP_003601334.1| Serine ca816001296 (5)gb|KDO84299.1|2e-66hypothetical protein CISIN_1g0114692mg [Citrus sinensis] gb|KDO84300.1| hypothet
JMSF051I14Sequence687001716 (18)ref|XP_002282331.1|3e-109PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]722001296 (5)ref|XP_010041326.1|7e-58PREDICTED: serine carboxypeptidase II-3-like [Eucalyptus grandis] gb|KCW44445.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039A23+ CCCATGCTTTGATATCAGATGAAACCTTTTCAGTAATTTCC
                      ____________________________________________________________
consensus CCCATGCTTTGATATCAGATGAAACCTTTTCAGTAATTTCC
 
. : . : . : . : . : . :
rJMSF039A23+ AAGGAGTGCGACTACATTCATACCAACTTTTCTGCCACCTGCAAAATTTACCAAGCCAAA
                      ____________________________________________________________
consensus AAGGAGTGCGACTACATTCATACCAACTTTTCTGCCACCTGCAAAATTTACCAAGCCAAA
 
. : . : . : . : . : . :
rJMSF039A23+ GCACTTATGGAGATGGGACCTGTNAACGTGACTAACATTTACACTAACTTCTGCTTTAAT
                      ____________________________________________________________
consensus GCACTTATGGAGATGGGACCTGTNAACGTGACTAACATTTACACTAACTTCTGCTTTAAT
 
. : . : . : . : . : . :
rJMSF016G24+ GAAAATGATCCTTGCCCAGGCGATTCTGTC
rJMSF039A23+ GGTGTCGCAAAACCACAATATCATGGTTTGGAAAATGATCCTTGCTCAGGCAGTTATGTC
rJMSF051I14+ ATGATCCTTGCTCAGGCGGTTATATC
                      ____________________________________________________________
consensus GGTGTCGCAAAACCACAATATCATGGTTTGGAAAATGATCCTTGCTCAGGCGGTTATGTC
 
. : . : . : . : . : . :
rJMSF016G24+ GTGTCTTACCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF039A23+ ACGTCTTACCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
JMFS100A06- GTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF051I14+ GCGTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
rJMSF010A21+ TTTTGG
                      ____________________________________________________________
consensus GCGTCTTATCTCAACCGAGACGAGGTGCAGAAGGCCCTCCATGCCATCAACACTTCTTGG
 
. : . : . : . : . : . :
rJMSF016G24+ ATAGGTTGCAGTCCAAAATTTGGATTGACTCATTGGAAAGACTCAGCAATAACAACCTTG
rJMSF039A23+ ATAGGTTGCAGTCCAAAATTTGGATTGAGTCATTGGAAAGACGCACCAATAACAACCTTG
JMFS100A06- ATGGGTTGCAGTCCAAAATTTGGATTGAATCACTGGAAAGACTCAGTAATAACAACCTTG
rJMSF051I14+ ATGGGTTGCAGTCCAAAATTTGGATTGAATCACTGGAAAGACTCAGTAATAACAACCTTG
rJMSF010A21+ ATGGTTTGCAGTCCAAAAGTTGGATCGAGTAATTGGAAGAACTCAGCAATAACAACCTTG
                      ____________________________________________________________
consensus ATGGGTTGCAGTCCAAAATTTGGATTGAATCATTGGAAAGACTCAGTAATAACAACCTTG
 
. : . : . : . : . : . :
rJMSF016G24+ CCCATAATCAAGCAGCTCATTGCAAACAAGATAAAAGTATGGCTATACAGTGGTGACGTA
rJMSF039A23+ CCCATAATCAAGCAGCTCATTGCAAACAAGATAAAAGTATGGATATACAGTGGTGACGTA
JMFS100A06- CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
rJMSF051I14+ CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
rJMSF010A21+ CCCATAATCAAGCAGCTCATTGCAAAGAAGTTAAAAGTATGGATATACAGTGGTGACGTA
                      ____________________________________________________________
consensus CCCATAATCAAGCAGCTTATTGCAAACAAGATGAGAGTATGGATATACAGTGGTGACGTA
 
. : . : . : . : . : . :
rJMSF016G24+ GATGCATTAGTTTCAGTGACATCAACCAGATATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF039A23+ GATGCATTAGTTTCAGTGACATCAACCAGGTATGCAATAAAAGCGATGAAACTTCCCGTC
JMFS100A06- GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF051I14+ GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
rJMSF010A21+ GATGCATTAGTTTCAGTAACATCAACCAGGTATGCAATAAAAGCCATGAAACTTCCTGTC
                      ____________________________________________________________
consensus GATGCGTTAGTTTCAGTGACATCAACTAGGTATGCAATAAAAGCGATGAAACTTCCTGTC
 
. : . : . : . : . : . :
rJMSF016G24+ GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF039A23+ GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGCACGTGGAA
JMFS100A06- GAGGTTGGTTGGCGGGCGTGGCATTCCGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF051I14+ GAGGTTGGTTGGCGGGCGTGGCATTCCGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
rJMSF010A21+ GAGGTTGCTTGGCGGGCGTGGCATTCTGATGGCACCAAGGATGTGGGAGGGTACGTGGAA
                      ____________________________________________________________
consensus GAGGTTGGTTGGCGGGCGTGGCATTCTGATGGCGCCAAGGATGTGGGAGGGTACGTGGAA
 
. : . : . : . : . : . :
rJMSF016G24+ GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGGGGGGCATTCAGCTCCAAGCTAC
rJMSF039A23+ GCGTACGAGGGATTGACACTGGTTACAATAAGAGGAGCTGGGCATTTAGCTCCTAGCTAC
JMFS100A06- GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
rJMSF051I14+ GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
rJMSF010A21+ GCGTACAAGGGATTGACACTGGTTACAATAAGAGGAGCTGGGCATTCAGCTCCTAGCTAC
                      ____________________________________________________________
consensus GCGTACAAGGGATTGACACTGGTTACTATAAGAGGAGCTGGGCATTCAGCTCCTAGCTTC
 
. : . : . : . : . : . :
rJMSF016G24+ CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTCCCCCCTGCC
rJMSF039A23+ CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTCCCCCCTCCC
JMFS100A06- CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
rJMSF051I14+ CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
rJMSF010A21+ CAACCAGAACGTGCATTGACTATGATTTCATCCTTCCTTCATGGGAAACTTCCCCCTGCC
                      ____________________________________________________________
consensus CAACCAGAACGTGCATTTACTATGATTTCATCTTTCCTTCAAGGGAAACTTCCCCCTGCC
 
. : . : . : . : . : . :
rJMSF016G24+ TTCAGCTAG
rJMSF039A23+ TTCAGCTAG
JMFS100A06- TTCAGCTAG
rJMSF051I14+ TTCAGCTAGAAGGTGTGATAGACACGCGGATACAATACA
rJMSF010A21+ TTCAGGTAAACCAAGATTACATCAAAACAAAATAGCTGTTCTGTCCCTAGTGTGTGGTGC
                      ____________________________________________________________
consensus TTCAGCTAGACGGTGTTTTCGTCACGCGGATATAGTTGTTCTGTCCCTAGTGTGTGGTGC
 
. : . : . : . : . : . :
rJMSF010A21+ AATTACATGATATTCATATTTTGTGATGATTTCAAAGCACATTTATGCAAACTTGTATAT
                      ____________________________________________________________
consensus AATTACATGATATTCATATTTTGTGATGATTTCAAAGCACATTTATGCAAACTTGTATAT
 
. : . : . : . : . : . :
rJMSF010A21+ TCACAAACAAGGGACCATACCTTTATTGATGCAGCAAGAAGGAAGCTAAGCTGAAAGTGA
                      ____________________________________________________________
consensus TCACAAACAAGGGACCATACCTTTATTGATGCAGCAAGAAGGAAGCTAAGCTGAAAGTGA
 
. : . : . : . : . : . :
rJMSF010A21+ TACTTCCATTTTGTTTTTGCAGCTAGGTGTGATAGAAACGAAAACAAACTCGTGGCAACT
                      ____________________________________________________________
consensus TACTTCCATTTTGTTTTTGCAGCTAGGTGTGATAGAAACGAAAACAAACTCGTGGCAACT
 
. : . : . : . : . : . :
rJMSF010A21+ GCGACCTACTGATTTCCATAGTGGCAACTGTTCAGCCACATGCTAATAAATATTACCTCT
                      ____________________________________________________________
consensus GCGACCTACTGATTTCCATAGTGGCAACTGTTCAGCCACATGCTAATAAATATTACCTCT
 
. : . : . : . : . : . :
rJMSF010A21+ ATATCAAGAAGATGCTGAGAAAAAGCTGTATGTAGTTAAACAGCCCTACAAATGCACCAA
                      ____________________________________________________________
consensus ATATCAAGAAGATGCTGAGAAAAAGCTGTATGTAGTTAAACAGCCCTACAAATGCACCAA