Contig 001295:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF012P16-                                                                    GGA
JMFF029L04-                                                   AAGAGATTCCTCGAGGGGGA
                      ____________________________________________________________
consensus                                                     AAGAGATTCCTCGAGGGGGA
 
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JMSF012P16-           AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
JMFF029L04-           AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
                      ____________________________________________________________
consensus             AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
 
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JMSF012P16-           ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCGTCCTCTGCTCCTT
JMFF029L04-           ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCATCCTCTGCTCCTT
                      ____________________________________________________________
consensus             ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCGTCCTCTGCTCCTT
 
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JMSF012P16-           CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
JMFF029L04-           CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
rJMFF029L04+                                      ACTCTTTTATTTNTTCTCAAAATTTTCAATTT
                      ____________________________________________________________
consensus             CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
 
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JMSF012P16-           AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
JMFF029L04-           AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
rJMFF029L04+          AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
                      ____________________________________________________________
consensus             AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
 
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JMSF012P16-           GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
JMFF029L04-           GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
rJMFF029L04+          GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
                      ____________________________________________________________
consensus             GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
 
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JMSF012P16-           TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
JMFF029L04-           TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
rJMFF029L04+          TGGTTNTCCGGAGACTGGGGTNTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
                      ____________________________________________________________
consensus             TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
 
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JMSF012P16-           TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
JMFF029L04-           TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
rJMFF029L04+          TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
                      ____________________________________________________________
consensus             TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
 
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JMSF012P16-           TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
JMFF029L04-           TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
rJMFF029L04+          TCAATTGCTAAATATGTGGGTCATTTNTCATAATTCTTTTTGGCTCTNTATTAGCTATAA
                      ____________________________________________________________
consensus             TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
 
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JMSF012P16-           CAAAATTTTATCTGATCAACGTCAA                                   
JMFF029L04-           CNNAATTTTATCTGATCAACGTCAA                                   
rJMFF029L04+          CAAAATTTTATNTGATCAACGTCAATTTGAGCATCATTTGCCCAGGTTAATTTGAAATTT
                      ____________________________________________________________
consensus             CAAAATTTTATCTGATCAACGTCAATTTGAGCATCATTTGCCCAGGTTAATTTGAAATTT
 
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rJMSF012P16+                                   AAAAAAANAACAATAATTGCTTTGTCACTATTATT
rJMFF029L04+          TTTTTTAAAGGAATTTGAATTGTTTAAAAAAAAAACAATAATTGCTTTGTCACTATTATT
                      ____________________________________________________________
consensus             TTTTTTAAAGGAATTTGAATTGTTTAAAAAAAAAACAATAATTGCTTTGTCACTATTATT
 
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rJMSF012P16+          TGAGTNCNTTANCTCCAGGTGAAGTNGTAGTGTAGCGTNGTNCCATATATGCCTGTTCTA
rJMFF029L04+          TGAGTGCTTTAATTCCAGGTGAAGTTGTAGTGTAGTGTTGTACCATATATGCCTGTTCTA
                      ____________________________________________________________
consensus             TGAGTGCTTTAATTCCAGGTGAAGTTGTAGTGTAGTGTTGTACCATATATGCCTGTTCTA
 
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rJMSF012P16+          ACCCGGGTGACATAGAGATTCGAAGCAT                                
rJMFF029L04+          ACCCGGGTGACATAGAGATTCGAAGCATGTGCTCCATCTAAACTAAAAGTCTAAGCTGAT
JMFN006N15+                                 AAGCATGTGCTTCATCTCAACTAAAAGTCTAAGCTGAT
                      ____________________________________________________________
consensus             ACCCGGGTGACATAGAGATTCGAAGCATGTGCTTCATCTCAACTAAAAGTCTAAGCTGAT
 
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rJMFF029L04+          AGTTGGATTGTACATTAATATTTATATGCTCAACA                         
JMFN006N15+           AGTTGGATTGTACATTAATGGTTATATGCTCAACAAGAGGTAGCATGGGTTTGTCCTACC
                      ____________________________________________________________
consensus             AGTTGGATTGTACATTAATGTTTATATGCTCAACAAGAGGTAGCATGGGTTTGTCCTACC
 
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JMFN006N15+           AAGCAATAAAAGAGAATCAAAGCATACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
rJMSF009P21-                                  TACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
                      ____________________________________________________________
consensus             AAGCAATAAAAGAGAATCAAAGCATACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
 
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JMFN006N15+           CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
rJMSF009P21-          CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
                      ____________________________________________________________
consensus             CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
 
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JMFN006N15+           TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
rJMSF009P21-          TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
                      ____________________________________________________________
consensus             TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
 
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JMFN006N15+           TTATCTCTCCATTGATGTACTTATCCCCT                               
rJMSF009P21-          TTATCTCTCCATTGATGTACTTATCCCCTCCATAATCCTTGTTCTTGACATCTATATAAG
                      ____________________________________________________________
consensus             TTATCTCTCCATTGATGTACTTATCCCCTCCATAATCCTTGTTCTTGACATCTATATAAG
 
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rJMSF009P21-          AATCAGGCAAGACCCACAAAACTCCAGGTAATCCCTTAAACTTCTCAGATGTTTCTTCAG
                      ____________________________________________________________
consensus             AATCAGGCAAGACCCACAAAACTCCAGGTAATCCCTTAAACTTCTCAGATGTTTCTTCAG
 
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rJMSF009P21-          ATACAGTGCATTGGAATCCCGTGTAAGTGGTTGTACTAAAAGCATACATGTTCTTCTTTG
                      ____________________________________________________________
consensus             ATACAGTGCATTGGAATCCCGTGTAAGTGGTTGTACTAAAAGCATACATGTTCTTCTTTG
 
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rJMSF009P21-          CTTCTTCCATACTGCCAAGAACAGTGGCAAGGGTATCTAGATAAGTGTCAATCATTTGCT
                      ____________________________________________________________
consensus             CTTCTTCCATACTGCCAAGAACAGTGGCAAGGGTATCTAGATAAGTGTCAATCATTTGCT
 
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rJMSF009P21-          CTCTAGTAGGGGCGGGGTCTTTGGGGAACTCCATGACAATAAGCCAGTGGTTGTAGTCGC
                      ____________________________________________________________
consensus             CTCTAGTAGGGGCGGGGTCTTTGGGGAACTCCATGACAATAAGCCAGTGGTTGTAGTCGC