Contig 001292:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF012I06+                                                               GAGGCAT
                      ____________________________________________________________
consensus                                                                  GAGGCAT
 
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rJMFF012I06+          AATGATTCCCCANCAATTGCTTTTGCCACTGGAAATGCTGATGATCTAGGGTCTCATGAC
rJMSF008O02+                                     ACTGGAAATGCTGATGATCTAGGGTCTCATGAC
                      ____________________________________________________________
consensus             AATGATTCCCCANCAATTGCTTTTGCCACTGGAAATGCTGATGATCTAGGGTCTCATGAC
 
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rJMFF012I06+          AGATGGCTTATTGATTTGAATGGTGATCTCCACTATGATGGAGTTGGATATGGTTCCAGT
rJMSF008O02+          AGATGGCTTATTGATTTGAATGGTGATCTCCACTATGATGGAGTTGGATATGGTTCCAGT
                      ____________________________________________________________
consensus             AGATGGCTTATTGATTTGAATGGTGATCTCCACTATGATGGAGTTGGATATGGTTCCAGT
 
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rJMFF012I06+          TACTTAGGAGAAACAGGTCATCACAGAAACGAACGACGATTGCCATCAAGATCAGAGATC
rJMSF008O02+          TACTTAGGAGAAACAGGTCATCACAGAAACGAACGACGATTGCCATCAAGATCAGAGATC
                      ____________________________________________________________
consensus             TACTTAGGAGAAACAGGTCATCACAGAAACGAACGACGATTGCCATCAAGATCAGAGATC
 
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rJMFF012I06+          TCTGAAAGAGTTCACAGAGGCCACAGAAATCGGGTTTCACAACCATCATTTTGCCCATCC
rJMSF008O02+          TCTGAAAGAGTTCACAGAGGCCACAGAAATCGGGTTTCACAACCATCATTTTGCCCATCC
                      ____________________________________________________________
consensus             TCTGAAAGAGTTCACAGAGGCCACAGAAATCGGGTTTCACAACCATCATTTTGCCCATCC
 
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rJMFF012I06+          GGGCTCCACCCTGATGGTACATGCTCGTGCGAGTCATTCTTCACATCTGAAGAGTTCAGT
rJMSF008O02+          GGGCTCCACCCTGATGGTACATGCTCGTGCGAGTCATTCTTCACATCTGAAGAGTTCAGT
                      ____________________________________________________________
consensus             GGGCTCCACCCTGATGGTACATGCTCGTGCGAGTCATTCTTCACATCTGAAGAGTTCAGT
 
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rJMFF012I06+          ACCCTTGCAAGTATTTCACGAATAATCATGCTTGCCGAGGCCTTATTTGAGGTAATCGAC
rJMSF008O02+          ACCCTTGCAAGTATTTCACGAATAATCATGCTTGCCGAGGCCTTATTTGAGGTAATCGAC
                      ____________________________________________________________
consensus             ACCCTTGCAAGTATTTCACGAATAATCATGCTTGCCGAGGCCTTATTTGAGGTAATCGAC
 
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rJMFF012I06+          GAGATTCATAGACAATCTTTCTCACTATCAACGTTCTCGCTCCCAGCTCCAGAAGCTACA
rJMSF008O02+          GAGATTCATAGACAATCTTTCTCACTATCAACGTTCTCGCTCCCAGCTCCAGAAGCTACA
                      ____________________________________________________________
consensus             GAGATTCATAGACAATCTTTCTCACTATCAACGTTCTCGCTCCCAGCTCCAGAAGCTACA
 
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rJMFF012I06+          GTAGATGCATTTCCTCTCAAATACCACAAAACTTTAGATCCCGTTGAAAATGCGTTGGGT
rJMSF008O02+          GTAGATGCATTTCCTCTCAAATACCACAAAACTTTAGATCCCGTTGAAAATGCGTTGGGT
                      ____________________________________________________________
consensus             GTAGATGCATTTCCTCTCAAATACCACAAAACTTTAGATCCCGTTGAAAATGCGTTGGGT
 
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rJMFF012I06+          GATACACAGCAGTGCTATATCTGTTTGGCTGAGTATGAAGATGGCGACAAACTGAGGGTT
rJMSF008O02+          GATACACAGCAGTGCTATATCTGTTTGGCTGAGTATGAAGATGGCGACAAACTGAGGGTT
                      ____________________________________________________________
consensus             GATACACAGCAGTGCTATATCTGTTTGGCTGAGTATGAAGATGGCGACAAACTGAGGGTT
 
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rJMFF012I06+          CTCCCTTGTCATCATGAATATCACATGATATGTATTGATAAATGGCTGAAAGAAGTAAAC
rJMSF008O02+          CTCCCTTGTCATCATGAATATCACATGATATGTATTGATAAATGGCTGAAAGAAGTAAAC
                      ____________________________________________________________
consensus             CTCCCTTGTCATCATGAATATCACATGATATGTATTGATAAATGGCTGAAAGAAGTAAAC
 
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rJMFF012I06+          AGGGTATGCCCGGTTTGCAGATGCAACGTTTGTAATGGTCCCGGGCAAAGTTCCATCTCA
rJMSF008O02+          AGGGTATGCCCGGTTTGCAGATGCAACGTTTGTAATGGTCCCGGGCAAAGTTCCATCTCA
                      ____________________________________________________________
consensus             AGGGTATGCCCGGTTTGCAGATGCAACGTTTGTAATGGTCCCGGGCAAAGTTCCATCTCA
 
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rJMFF012I06+          ACCACAGAAACCCCTTTGCAATGATGCAAAATTGTGAATATTCTATGCATACAATACATA
rJMSF008O02+          ACCACAGAAACCCCTTTGCAATGATGCAAAATTGTGAATATTCTATGCATACAATACATA
                      ____________________________________________________________
consensus             ACCACAGAAACCCCTTTGCAATGATGCAAAATTGTGAATATTCTATGCATACAATACATA
 
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rJMFF012I06+          CAGACACACACATA                                              
rJMSF008O02+          CAGACACACACATATACATATATGCATTTTCTGCAGTTGCCATCTAGCTCTGAACTTCTT
                      ____________________________________________________________
consensus             CAGACACACACATATACATATATGCATTTTCTGCAGTTGCCATCTAGCTCTGAACTTCTT