Contig 001289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008I13Sequence373003453 (9)gb|EYU31893.1|3e-23hypothetical protein MIMGU_mgv1a0019611mg, partial [Erythranthe guttata]139001289 (2)gb|KHN40553.1|3e-07hypothetical protein glysoja_001051 [Glycine soja]
JMSF023F09Sequence677003453 (9)ref|XP_004229746.1|171PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]134001289 (2)emb|CBI16665.3|2e-05unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF023F09+                                                          GTTGGTNTTAGC
rJMSF008I13+                                                   CTNCCCTGTTGGTNTTAGC
                      ____________________________________________________________
consensus                                                      CTNCCCTGTTGGTNTTAGC
 
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rJMSF023F09+          CTTCCTGATANTGATACCGGGCNTGCGTTGGANGCCCGGGNCCCNCTTGNTGNGAAAAAA
rJMSF008I13+          CTTCCTGATACTGATNCCGGGCNTGCGTTGGANGCCCGGGNCCCNCTTGNTGNGAAAAAA
                      ____________________________________________________________
consensus             CTTCCTGATACTGATACCGGGCNTGCGTTGGANGCCCGGGNCCCNCTTGNTGNGAAAAAA
 
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rJMSF023F09+          GCNGAGCTTGCNTTTTNCCAACGACGGGNGGAAGATGNGATGGTAAAACCCTCAAAGGCC
rJMSF008I13+          GCNGAGNTTGCATTTTGCCAACGNCGGGTGGAAGATGNGATGGTAAAACCCTCAAAGGCC
                      ____________________________________________________________
consensus             GCNGAGCTTGCATTTTGCCAACGACGGGTGGAAGATGNGATGGTAAAACCCTCAAAGGCC