Contig 001288:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008H15+                                     GGTCCAGAAAACTGAAGCAAACTATACAGCGAT
                      ____________________________________________________________
consensus                                        GGTCCAGAAAACTGAAGCAAACTATACAGCGAT
 
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rJMSF008H15+          ACACACCAGTGCAGGTGTGGGACTGGCNTTTTCAAATCGTGTGAAGTGAATGGCAGAATT
                      ____________________________________________________________
consensus             ACACACCAGTGCAGGTGTGGGACTGGCNTTTTCAAATCGTGTGAAGTGAATGGCAGAATT
 
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rJMSF034P21+                           AATAGATGCCAAAGACATCGTGAACTGCATTGCGAGGGGAAAA
rJMSF008H15+          CTCCTTCACGAAGGTCTAATAGATGCCAAAGACATCGTGAACTGCATTGCGAGGGGAAAA
                      ____________________________________________________________
consensus             CTCCTTCACGAAGGTCTAATAGATGCCAAAGACATCGTGAACTGCATTGCGAGGGGAAAA
 
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rJMSF034P21+          TGCAAGAAGTTAGGCGTGAAACTTCCCTCCTTGTCCATTTTGCAGTGCCTACTTGAATCA
rJMSF008H15+          TGCAAGAAGTTAGGCGTGAAACTTCCCTCCTTGTCCATTTTGCAGTGCCTACTTGAATCA
                      ____________________________________________________________
consensus             TGCAAGAAGTTAGGCGTGAAACTTCCCTCCTTGTCCATTTTGCAGTGCCTACTTGAATCA
 
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rJMSF034P21+          GCAAAGTCCAACTCAGCTGGCTTGGTCATCTTCGATGAGGTGGAGTTAACAAAGACCAAC
rJMSF008H15+          GCAAAGTCCAACTCAGCTGGCTTGGTCATCTTCGATGAGGTGGAGTTAACAAAGACCAAC
                      ____________________________________________________________
consensus             GCAAAGTCCAACTCAGCTGGCTTGGTCATCTTCGATGAGGTGGAGTTAACAAAGACCAAC
 
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rJMSF034P21+          TGGCCAAAGGACATAATATTCGAGTGGTTTGTTGGACCGCTTTTAACCATGAAGGAGCAA
rJMSF008H15+          TGGCCAAAGGACATAATATTCGAGTGGTTTGTTGGACCGCTTTTAACCATGAAGGAGCAA
                      ____________________________________________________________
consensus             TGGCCAAAGGACATAATATTCGAGTGGTTTGTTGGACCGCTTTTAACCATGAAGGAGCAA
 
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rJMSF034P21+          ATAAAGCGACTTCAACTGCAGGAAGACGAAGAAATTTGCCTTAGAAAGCTGCTAATGCAT
rJMSF008H15+          ATAAAGCGACTTCAACTGCAGGAAGACGAAGAAATTTGCCTTAGAAAGCTGCTAATGCAT
                      ____________________________________________________________
consensus             ATAAAGCGACTTCAACTGCAGGAAGACGAAGAAATTTGCCTTAGAAAGCTGCTAATGCAT
 
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rJMSF034P21+          TGCAAAAACGACAGACCAGAGGAGTGGGATGAGATTGGATTTCCCTCCAGCGACAATGTC
rJMSF008H15+          TGCAAAAACGACAGACCAGAGGAGTGGGATGAGATTGGATTTCCCTCCAGCGACAATGTC
                      ____________________________________________________________
consensus             TGCAAAAACGACAGACCAGAGGAGTGGGATGAGATTGGATTTCCCTCCAGCGACAATGTC
 
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rJMSF034P21+          AAACGAGCCCAATTACAAGCGATAATCAGGAGGTTGCAGGGTATTGTTAGTTCTCTATCC
rJMSF008H15+          AAACGAGCCCAATTACAAGCGATAATCAGGAGGTTGCAGGGTATTGTTAGTTCTCTATCC
                      ____________________________________________________________
consensus             AAACGAGCCCAATTACAAGCGATAATCAGGAGGTTGCAGGGTATTGTTAGTTCTCTATCC
 
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rJMSF034P21+          CGTATACCCACATTTCGAAGGCGCTTCAAGAATCTGGTGAAGAAGTTATACATAGAGGCA
rJMSF008H15+          CGTATACCCACATTTCGAAGGCGCTTCAAGAATCTGGTGAAGAAGTTATACATAGAGGCA
                      ____________________________________________________________
consensus             CGTATACCCACATTTCGAAGGCGCTTCAAGAATCTGGTGAAGAAGTTATACATAGAGGCA
 
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rJMSF034P21+          ATCGAGATCGGTCTTATTGTCTCGTATGCCAACATTGAAGGTGGCACCAAGTCGGGCCAT
rJMSF008H15+          ATCGAGATCGGTCTTATTGTCTCGTATGCCAACATTGAAGGTGGCACCAAGTCGGGCCAT
                      ____________________________________________________________
consensus             ATCGAGATCGGTCTTATTGTCTCGTATGCCAACATTGAAGGTGGCACCAAGTCGGGCCAT
 
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rJMSF034P21+          GGCAATGGCAGTAGATGCAGTAATGGTAGAGACGACTCGAAGGATGGGAATGAAAGTCCC
rJMSF008H15+          GGCAATGGCAGTAGATGCAGTAATGGTAGAGACGACTCGAAGGATGGGAATGAAAGTCCC
                      ____________________________________________________________
consensus             GGCAATGGCAGTAGATGCAGTAATGGTAGAGACGACTCGAAGGATGGGAATGAAAGTCCC
 
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rJMSF034P21+          GAGAATGAGCTTGGCTTTGAGGTAAATGGAAATGTTGTATGAATTATGATGATGACCATT
rJMSF008H15+          GAGAATGAGCTTGGCTTTGAGGTAAATGGAAATGTTGTATGAATTATGATGATGACCATT
                      ____________________________________________________________
consensus             GAGAATGAGCTTGGCTTTGAGGTAAATGGAAATGTTGTATGAATTATGATGATGACCATT
 
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rJMSF034P21+          CGTTGAAACTGAAAGTTGTAGCATATTACCATGTTCATTGTATTAAGGATGCAAGTCAAC
rJMSF008H15+          CGTTGAAACTGAAAGTTGTAGCATATTA-CATGTTCATTGTATTAAGGATGCAAGTCAAC
                      ____________________________________________________________
consensus             CGTTGAAACTGAAAGTTGTAGCATATTACCATGTTCATTGTATTAAGGATGCAAGTCAAC