Contig 001287:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF011C05+             GCAGGTGCAACAATTCAGGTTGAGAATGTAGATGATTTCACATGGCTTAATGCTTCT
rJMSF008E06+          CCTGCAGGTGCAACCATTCAGGTTGAGAATGTAGATGATTTCACATGGCTTAATGCTTCT
                      ____________________________________________________________
consensus             CCTGCAGGTGCAACCATTCAGGTTGAGAATGTAGATGATTTCACATGGCTTAATGCTTCT
 
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rJMSF011C05+          TACTGCCCTGTTTTGCGTCAGCTTGAATCTGCAAGAATGATAGAGTATTACTTCAAGGCA
rJMSF008E06+          TACTGCCCTGTTTTGCGTCAGCTTGAATCTGCAAGAATGATAGAGTATTACTTCAAGGCA
                      ____________________________________________________________
consensus             TACTGCCCTGTTTTGCGTCAGCTTGAATCTGCAAGAATGATAGAGTATTACTTCAAGGCA
 
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rJMSF011C05+          CATCACTCCGCTTCCCTCTCTTCTGGGACTGACAATCTAAAATATAGAAATCCAAAATAT
rJMSF008E06+          CATCACTCCGCTTCCCTCTCTTCTGGGACTGACAATCTAAAATATAGAAATCCAAAATAT
                      ____________________________________________________________
consensus             CATCACTCCGCTTCCCTCTCTTCTGGGACTGACAATCTAAAATATAGAAATCCAAAATAT
 
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rJMSF011C05+          TTGTCAATGCTGAACCATCTACGATTTTACCTCCCAGAAGTGTACCCAAAGTTGGATAAG
rJMSF008E06+          TTGTCAATGCTGAACCATCTACGATTTTACCTCCCAGAAGTGTACCCAAAGTTGGATAAG
                      ____________________________________________________________
consensus             TTGTCAATGCTGAACCATCTACGATTTTACCTCCCAGAAGTGTACCCAAAGTTGGATAAG
 
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rJMSF011C05+          ATCTTGTTTCTGGATGACGATATTGTTGTTCAAAAGGATTTGACTCCACTTTGGTCTGTT
rJMSF008E06+          ATCTTGTTTCTGGATGACGATATTGTTGTTCAAAAGGATTTGACTCCACTTTGGTCTGTT
                      ____________________________________________________________
consensus             ATCTTGTTTCTGGATGACGATATTGTTGTTCAAAAGGATTTGACTCCACTTTGGTCTGTT
 
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rJMSF011C05+          GATCTAGGAGGTATGGTTAATGGTGCTGTAGAGACCTGCAAGGAGAGCTTCCATAGGTTT
rJMSF008E06+          GATCTAGGAGGTATGGTTAATGGTGCTGTAGAGACCTGCAAGGAGAGCTTCCATAGGTTT
                      ____________________________________________________________
consensus             GATCTAGGAGGTATGGTTAATGGTGCTGTAGAGACCTGCAAGGAGAGCTTCCATAGGTTT
 
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rJMSF011C05+          GATAAATATCTGAACTTCTCCAACCCAAAGATATCTGAGAATTTTGATCCAAATGCTTGT
rJMSF008E06+          GATAAATATCTGAACTTCTCCAACCCAAAGATATCTGAGAATTTTGATCCAAATGCTTGT
                      ____________________________________________________________
consensus             GATAAATATCTGAACTTCTCCAACCCAAAGATATCTGAGAATTTTGATCCAAATGCTTGT
 
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rJMSF011C05+          GGATGGGCTTTTGGCATGAATATGTTTGATTTGAATGAGTGGAGGAGGTGGAACATTACG
rJMSF008E06+          GGATGGGCTTTTGGCATGAATATGTTTGATTTGAATGAGTGGAGGAGGTGGAACATTACG
                      ____________________________________________________________
consensus             GGATGGGCTTTTGGCATGAATATGTTTGATTTGAATGAGTGGAGGAGGTGGAACATTACG
 
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rJMSF011C05+          GGAATATATCATCGTTGGCAAGACATGAATGAGGACAGAACACTTTGGAAACTTGGCACA
rJMSF008E06+          GGAATATATCATCGTTGGCAAGACATGAATGAGGACAGAACACTTTGGAAACTTGGCACA
                      ____________________________________________________________
consensus             GGAATATATCATCGTTGGCAAGACATGAATGAGGACAGAACACTTTGGAAACTTGGCACA
 
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rJMSF011C05+          TTGCCTCCAGGGCTGATCACTTTTTATAATTTGACTCATCCTCTGGAGCGGACCTGGCAC
rJMSF008E06+          TTGCCTCCAGGGCTGATCACTTTTTATAATTTGACTCATCCTCTGGAGCGGACCTGGCAC
                      ____________________________________________________________
consensus             TTGCCTCCAGGGCTGATCACTTTTTATAATTTGACTCATCCTCTGGAGCGGACCTGGCAC
 
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rJMSF011C05+          GTATTGGGTCTTGGTTATGATCCAGCCCTTAACAAAACAGAAATGGAAAATGCAGCTGTT
rJMSF008E06+          GTATTGGGTCTTGGTTATGATCCAGCCCTTAACAAAACAGAAATGGAAAATGCAGCTGTT
                      ____________________________________________________________
consensus             GTATTGGGTCTTGGTTATGATCCAGCCCTTAACAAAACAGAAATGGAAAATGCAGCTGTT
 
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rJMSF011C05+          GTCCACTACAATGGAAATTATAAACCATGGTTGGATCTTGCCATCGCTAAGTACAGAACT
rJMSF008E06+          GTCCACTACAATGGAAATTATAAACCATGGTTGGATCTTGCCATCGCTAAGTACAGAACT
                      ____________________________________________________________
consensus             GTCCACTACAATGGAAATTATAAACCATGGTTGGATCTTGCCATCGCTAAGTACAGAACT
 
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rJMSF011C05+          TACTGGTCCAGATATGTAATGTATGATAATCCATATCTTCAATTT               
rJMSF008E06+          TACTGGTCCAGATATGTAATGTATGATAATCCATATCTTCAATTTTGCAACATCAATGAG
                      ____________________________________________________________
consensus             TACTGGTCCAGATATGTAATGTATGATAATCCATATCTTCAATTTTGCAACATCAATGAG