Contig 001284:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF023M10+                                       TGACATACCCTGGCTGAAGGCATACTATAAT
                      ____________________________________________________________
consensus                                          TGACATACCCTGGCTGAAGGCATACTATAAT
 
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rJMSF023M10+          TTTGGGTTTGATCATTTCAACATCTCCTGGAAGAAAAGTGGCATTTGGGGTCTTGTTGAT
                      ____________________________________________________________
consensus             TTTGGGTTTGATCATTTCAACATCTCCTGGAAGAAAAGTGGCATTTGGGGTCTTGTTGAT
 
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rJMSF023M10+          TGCCTTATGGGAAATGCCGGTCCATTTGCTTCCGGGGACTGGATACTTCCTGACCTCACT
JMFS111B01-                                                 CTGGATACTTCCTGACCTCACT
                      ____________________________________________________________
consensus             TGCCTTATGGGAAATGCCGGTCCATTTGCTTCCGGGGACTGGATACTTCCTGACCTCACT
 
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rJMSF023M10+          ATCCAGGGTGCTATCAAGGTGAACAGCCACTTACGTACATTTCCTAACACGTACTACTTC
JMFS111B01-           ATCCAGGGTGCTATCAAGGTGAACAGCCACTTACGTACATTTCCTAACACGTACTACTTC
                      ____________________________________________________________
consensus             ATCCAGGGTGCTATCAAGGTGAACAGCCACTTACGTACATTTCCTAACACGTACTACTTC
 
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rJMSF023M10+          AGCTATGCCACAAAGCGCACGAGGAAAATTATGGGTGTTACAGTACCTTCCGGCATACTT
JMFS111B01-           AGCTATGCCACAAAGCGCACGAGGAAAATTATGGGTGTTACAGTACCTTCCGGCATACTT
                      ____________________________________________________________
consensus             AGCTATGCCACAAAGCGCACGAGGAAAATTATGGGTGTTACAGTACCTTCCGGCATACTT
 
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rJMSF023M10+          GGAATACATCCTCTACTGTTTATCAGAGTACTGCAAATGAGCCTATGGCGACACCCTACT
JMFS111B01-           GGAATACATCCTCTACTGTTTATCAGAGTACTGCAAATGAGCCTATGGCGACACCCTACT
                      ____________________________________________________________
consensus             GGAATACATCCTCTACTGTTTATCAGAGTACTGCAAATGAGCCTATGGCGACACCCTACT
 
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rJMSF023M10+          GATGTCTCGCCCCCTTACAAAGGCTACAGGGATGAGGACTGGTGGGAAAATGATGGAGCA
JMFS111B01-           GATGTCTCGCCCCCTTACAAAGGCTACAGGGATGAGGACTGGTGGGAAAATGATGGAGCA
                      ____________________________________________________________
consensus             GATGTCTCGCCCCCTTACAAAGGCTACAGGGATGAGGACTGGTGGGAAAATGATGGAGCA
 
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rJMSF023M10+          CTCAACACTATCTCCATGACTCACCCTCGTTTGCCCGTTGAACACCCAAGTCAGCATGTT
JMFS111B01-           CTCAACACTATCTCCATGACTCACCCTCGTTTGCCCGTTGAACACCCAAGTCAGCATGTT
rJMSF007M11+                          TGACTCACCCTCGTTTGCCCGTTGAACACCCAAGTCAGCATGTT
                      ____________________________________________________________
consensus             CTCAACACTATCTCCATGACTCACCCTCGTTTGCCCGTTGAACACCCAAGTCAGCATGTT
 
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rJMSF023M10+          GTAAAGGATTCTGACTGCCAACCACTGCAACCAGGGATCTGGTATTATAAGATTGTGGAA
JMFS111B01-           GTAAAGGATTCTGACTGCCAACCACTGCAACCAGGGATCTGGATTTATAA-TGAAAAGAA
rJMSF007M11+          GTAAAGGATTCTGACTGCCAACCACTGCAACCAGGGATCTGGTATTATAAGATTGTGGAA
                      ____________________________________________________________
consensus             GTAAAGGATTCTGACTGCCAACCACTGCAACCAGGGATCTGGTATTATAAGATTGTGGAA
 
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rJMSF023M10+          GGTGATCACATTCTTTTCATTATAAATCGGGAAAGGGCCGGAGTCCAATTTGATTTGATA
JMFS111B01-           TGTGATCACATTCTTTTCATTATAAATCGGGAAAGGGCCGGAGTCCAATTTGATTTGATA
rJMSF007M11+          GGTGATCACATTCTTTTCATTATAAATCGGGAAAGGGCCGGAGTCCAATTTGATTTGATA
                      ____________________________________________________________
consensus             GGTGATCACATTCTTTTCATTATAAATCGGGAAAGGGCCGGAGTCCAATTTGATTTGATA
 
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rJMSF023M10+          TACGATGGCATATTCGAGCGCTGCAGGAAGCATGTCTTTAGGAAACTACCAACATTACCC
JMFS111B01-           TACGATGGCATATTCGAGCGCTGCAGGAAGCATGTCTTTAGGAAACTACCAACATTACCC
rJMSF007M11+          TACGATGGCATATTCGAGCGCTGCAGGAAGCATGTCTTTAGGAAACTACCAACATTACCC
                      ____________________________________________________________
consensus             TACGATGGCATATTCGAGCGCTGCAGGAAGCATGTCTTTAGGAAACTACCAACATTACCC
 
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rJMSF023M10+          GATAAGTGACTCTGATCTCTAGGTATCACGACGTTTCTCTAGCAATACACGACAAAGTTG
JMFS111B01-           GATAAGTGACTCTGATCTCTAGGTATCACGACGTTTCTCTAGCAATACACGACANAGTTG
rJMSF007M11+          GATAAGTGACTCTGATCTCTAGGTATCACGACGTTTCTCTAGCAATACACGACAAAGTTG
                      ____________________________________________________________
consensus             GATAAGTGACTCTGATCTCTAGGTATCACGACGTTTCTCTAGCAATACACGACAAAGTTG
 
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rJMSF023M10+          AAGAAATAGGAGAATCTAGACATCATAAGCTGTAGTAGTATTGTACTAAAATTCTTTATT
JMFS111B01-           AAGAAATAGGAGAATCTAGACATCATAAGCTGTAGTAGTATTGTACTAAAATTCTTTATT
rJMSF007M11+          AAGAAATAGGAGAATCTAGACATCATAAGCTGTAGTAGTATTGTACTAAAATTCTTTATT
                      ____________________________________________________________
consensus             AAGAAATAGGAGAATCTAGACATCATAAGCTGTAGTAGTATTGTACTAAAATTCTTTATT
 
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rJMSF023M10+          CTTCTCT                                                     
JMFS111B01-           CTTCTCTTTTTCTGCCCTCTT                                       
rJMSF007M11+          CTTCTCTTTTTCTGCCCTCTTTTAATCTAGGAAGAAGAATACTATCGTTTCCCCATTGTG
                      ____________________________________________________________
consensus             CTTCTCTTTTTCTGCCCTCTTTTAATCTAGGAAGAAGAATACTATCGTTTCCCCATTGTG
 
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rJMSF007M11+          CATCTTTGTCGTTCCCCGTATATTTCCTGCGTGTATTCTGATCAGGCATCGCCCCCGCCC
                      ____________________________________________________________
consensus             CATCTTTGTCGTTCCCCGTATATTTCCTGCGTGTATTCTGATCAGGCATCGCCCCCGCCC
 
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rJMSF007M11+          AAGTTTGTATGTAGGAAAGGGAAAACGCCACTCCAGTAGACTCAGCAAAGGCAATGTGTT
                      ____________________________________________________________
consensus             AAGTTTGTATGTAGGAAAGGGAAAACGCCACTCCAGTAGACTCAGCAAAGGCAATGTGTT
 
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rJMSF007M11+          GTTTGGAATTGTGTTGGAAGAATAGTTTCCTGCAACTGAGTTGAAGGAATGTGGTTAGTT
                      ____________________________________________________________
consensus             GTTTGGAATTGTGTTGGAAGAATAGTTTCCTGCAACTGAGTTGAAGGAATGTGGTTAGTT
 
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rJMSF007M11+          TGGTGTTTGGAAGCCATTGTTGAGGGAAATATCCATTGTTGATTCTTGTGGTTGGGAGGG
                      ____________________________________________________________
consensus             TGGTGTTTGGAAGCCATTGTTGAGGGAAATATCCATTGTTGATTCTTGTGGTTGGGAGGG
 
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rJMSF007M11+          GACTAAAAGTTAAAAAATTAATTATATTCTTTTTGGTTCAGTTTTAGGCAGTTGTAGATG
                      ____________________________________________________________
consensus             GACTAAAAGTTAAAAAATTAATTATATTCTTTTTGGTTCAGTTTTAGGCAGTTGTAGATG
 
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rJMSF007M11+          AGATGAGCAATTGTATGGGTCATCCCATTTCCTACACTTTACTGTCTTCACTCAAAGGAT
                      ____________________________________________________________
consensus             AGATGAGCAATTGTATGGGTCATCCCATTTCCTACACTTTACTGTCTTCACTCAAAGGAT