Contig 001267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N20Sequence288006634 (6)ref|XP_010101382.1|2e-04Protein IQ-DOMAIN 14 [Morus notabilis] gb|EXB88329.1| Protein IQ-DOMAIN 14 [Moru489001267 (6)emb|CDP10875.1|9e-49unnamed protein product [Coffea canephora]
JMSF002M08Sequence227006634 (6)707001267 (6)emb|CDP10875.1|3e-64unnamed protein product [Coffea canephora]
JMSF013J03Sequence248006634 (6)745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF017P04Sequence489006634 (6)ref|XP_006366143.1|5e-26PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF038H06Sequence683006634 (6)ref|XP_006366143.1|2e-28PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]886001267 (6)emb|CDP10875.1|5e-80unnamed protein product [Coffea canephora]
JMSF050D11Sequence701006634 (6)ref|XP_004244759.1|2e-16PREDICTED: protein IQ-DOMAIN 14 [Solanum lycopersicum]727001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF038H06+                       CCGATCCAGTGGGATACCCGTGGTGGTGGAACTGGTTAGAACGCCAG
                      ____________________________________________________________
consensus                          CCGATCCAGTGGGATACCCGTGGTGGTGGAACTGGTTAGAACGCCAG
 
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rJMSF013J03+                                                               TGCTGTG
rJMSF017P04+                                                               TGCTGTG
rJMSF038H06+          CTGCCTCCTCCTGCAGCAGCAGCAGCAGCCGCCAATCCTTCAGAAAACCAGTCTGCTGTG
rJMSF050D11+                                                               TGCTGTG
                      ____________________________________________________________
consensus             CTGCCTCCTCCTGCAGCAGCAGCAGCAGCCGCCAATCCTTCAGAAAACCAGTCTGCTGTG
 
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rJMSF013J03+          AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF017P04+          AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF038H06+          AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF050D11+          AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF002M08+                       TAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
                      ____________________________________________________________
consensus             AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
 
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rJMSF013J03+          CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF017P04+          CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF038H06+          CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF050D11+          CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF002M08+          CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
                      ____________________________________________________________
consensus             CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
 
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rJMSF013J03+          CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF017P04+          CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF038H06+          CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF050D11+          CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF002M08+          CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
                      ____________________________________________________________
consensus             CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
 
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rJMSF013J03+          ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF017P04+          ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF038H06+          ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF050D11+          ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMFF040N20+                    CCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTNGT
rJMSF002M08+          ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
                      ____________________________________________________________
consensus             ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
 
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rJMSF013J03+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF017P04+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF038H06+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF050D11+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMFF040N20+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF002M08+          TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
                      ____________________________________________________________
consensus             TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
 
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rJMSF013J03+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF017P04+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF038H06+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCNAAGCAAGAGCAAGTAGCAAC
rJMSF050D11+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMFF040N20+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF002M08+          GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
                      ____________________________________________________________
consensus             GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
 
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rJMSF013J03+          CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF017P04+          CCGAGGGAGAGGAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF038H06+          CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF050D11+          CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMFF040N20+          CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF002M08+          CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
                      ____________________________________________________________
consensus             CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
 
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rJMSF013J03+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF017P04+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF038H06+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF050D11+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMFF040N20+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF002M08+          TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
                      ____________________________________________________________
consensus             TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
 
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rJMSF013J03+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF017P04+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF038H06+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF050D11+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMFF040N20+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF002M08+          GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
                      ____________________________________________________________
consensus             GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
 
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rJMSF013J03+          TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF017P04+          TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF038H06+          TCAACTGTTTCTANGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF050D11+          TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMFF040N20+          TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF002M08+          TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
                      ____________________________________________________________
consensus             TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
 
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rJMSF013J03+          GATTTCTT                                                    
rJMSF017P04+          GATTTCTT                                                    
rJMSF038H06+          GATTTCTT                                                    
rJMSF050D11+          GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
rJMFF040N20+          GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
rJMSF002M08+          GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
                      ____________________________________________________________
consensus             GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
 
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rJMSF050D11+          GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT
rJMFF040N20+          GTGTCTTTTCATGTATACC                                         
rJMSF002M08+          GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT
                      ____________________________________________________________
consensus             GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT