Contig 001266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049J13Sequence616000201 (35)ref|XP_002285503.1|2e-97PREDICTED: ADP,ATP carrier protein, mitochondrial [Vitis vinifera]530001266 (3)
JMFF050N15Sequence613000201 (35)ref|XP_002285503.1|2e-96PREDICTED: ADP,ATP carrier protein, mitochondrial [Vitis vinifera]525001266 (3)
JMSF002K23Sequence334019885ref|XP_010323625.1|3e-14PREDICTED: synaptonemal complex protein ZIP1-like [Solanum lycopersicum]747001266 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002K23+ AGATCAACTGTAGTTGGGTTGAAAAGT
                      ____________________________________________________________
consensus AGATCAACTGTAGTTGGGTTGAAAAGT
 
. : . : . : . : . : . :
rJMSF002K23+ AGTGAGAATGAGAAGGAAATCAAAATCCAGGCCATGAGGAGGAAAAGAAACTGCTGATTT
                      ____________________________________________________________
consensus AGTGAGAATGAGAAGGAAATCAAAATCCAGGCCATGAGGAGGAAAAGAAACTGCTGATTT
 
. : . : . : . : . : . :
rJMSF002K23+ TAAAAGTGGAGAAATTGGAGGCTAGTAAGGATGATCAGAAGGTAGAAAAGGAAGCAAAGG
                      ____________________________________________________________
consensus TAAAAGTGGAGAAATTGGAGGCTAGTAAGGATGATCAGAAGGTAGAAAAGGAAGCAAAGG
 
. : . : . : . : . : . :
rJMFF049J13+ TCAGAGCATTGAAGAATAAACTTCAGGATTGGGATAAGGAGAAAGCGGAGC
rJMFF050N15+ CAGGATTGGGATAAGGAGAAAGCGGAGC
rJMSF002K23+ AGCTGCACATCAGAGCATTGAAGAATAAACTTCAGGATTGGGATAAGGAGAAAGCGGAGC
                      ____________________________________________________________
consensus AGCTGCACATCAGAGCATTGAAGAATAAACTTCAGGATTGGGATAAGGAGAAAGCGGAGC
 
. : . : . : . : . : . :
rJMFF049J13+ TGGCAAAGAAAGAGATGGAGGCGAGGGTGGATGAAATGAAAGGGAGAGTGCTAGAGATTG
rJMFF050N15+ TGGCAAAGAAAGAGATGGAGGCGAGGGTGGATGAAATGAAAGGGAGAGTGCTAGAGATTG
rJMSF002K23+ TGGCAAAGAAAGAGATGGAGGCGAGGGTGGATGAAATGAAAGGGAGAGTGCTAGAGATTG
                      ____________________________________________________________
consensus TGGCAAAGAAAGAGATGGAGGCGAGGGTGGATGAAATGAAAGGGAGAGTGCTAGAGATTG
 
. : . : . : . : . : . :
rJMFF049J13+ AGAAGAAGTTAAAGGATAAGGAACTTCTGATTGCAGATGATCACACCAATGGGATTCCAG
rJMFF050N15+ AGAAGAAGTTAAAGGATAAGGAACTTCTGATTGCAGATGATCACACCAATGGGATTCCAG
rJMSF002K23+ AGAAGAAGTTAAAGGATAAGGAACTACTGATTGCAGATGATCACACCAATGGGATTCCAG
                      ____________________________________________________________
consensus AGAAGAAGTTAAAGGATAAGGAACTTCTGATTGCAGATGATCACACCAATGGGATTCCAG
 
. : . : . : . : . : . :
rJMFF049J13+ TGGCAGAGGGTAAGAATTATGGCTTCAAATTGGAGTGGCCATTGGTGATTGGGTCAGCAG
rJMFF050N15+ TGGCAGAGGGTAAGAATTATGGCTTCAAATTGGAGTGGCCATTGGTGATTGGGTCAGCAG
rJMSF002K23+ TGGCAGAGGGTAAGAATTATGGCTTCAAATTGGAGTGGCCATTGGTGATTGGGTCAGCAG
                      ____________________________________________________________
consensus TGGCAGAGGGTAAGAATTATGGCTTCAAATTGGAGTGGCCATTGGTGATTGGGTCAGCAG
 
. : . : . : . : . : . :
rJMFF049J13+ TTGCAGCTATTGCTCTAGCCACAACAGTGATTTACCTGAGAAACGCTAGGAAAACATAGA
rJMFF050N15+ TTGCAGCTATTGCTCTAGCCACAACAGTGATTTCCCTGAGAAACGCTAGGAAAACATAGA
rJMSF002K23+ TTGCAGCTATTGCTCTAGCCACAACAGTGATCTACCTGAGAAACGCTAGGAAAACATAGA
                      ____________________________________________________________
consensus TTGCAGCTATTGCTCTAGCCACAACAGTGATTTACCTGAGAAACGCTAGGAAAACATAGA
 
. : . : . : . : . : . :
rJMFF049J13+ TTGGTAGTTCCCCAAAATAAGAAGCAGAGTTGCTGAAACTCAGGTTGAGATTTTGGTGTC
rJMFF050N15+ TTGGTAGTTCCCCAAAATAAGAAGCAGAGTTGCTGAAACTCAGGTTGAGATTTTGGTGTT
rJMSF002K23+ TTGGTAGTTCCACAAAATAAGAAGCAGAGTTGCTGAAACTCAGGTTGAGATTCTGGTGTC
                      ____________________________________________________________
consensus TTGGTAGTTCCCCAAAATAAGAAGCAGAGTTGCTGAAACTCAGGTTGAGATTTTGGTGTC
 
. : . : . : . : . : . :
rJMFF049J13+ TAACCCCTCCCCGGATGATAGAATTTTTGATACCCATGCTGTTTTTTGCAGGTCTTTGTT
rJMFF050N15+ TAACCACTCCCCGGATGATAGAATTTTTGATACCCATGCTGTTTTTTGCAGGTCTTTGTT
rJMSF002K23+ TAACCACTCCACGGATGATAGAATTTTTGATACACATGCTGTTTTTTGCAGGTCTTTGTT
                      ____________________________________________________________
consensus TAACCACTCCCCGGATGATAGAATTTTTGATACCCATGCTGTTTTTTGCAGGTCTTTGTT
 
. : . : . : . : . : . :
rJMFF049J13+ ATGAGGTTTTGTCTTTTCCTTAAACTAAGATTGGGTTGTCAATGTTGCTTCGGAGTAATA
rJMFF050N15+ ATGAGGTTTTGTCTTTTCCTTAAACTAAGATTGGGTTGTCAATGTTGCTTCGGAGTAATA
rJMSF002K23+ ATGAGGTTTTGTCTTTTCCTTAAACTAAGATTGGGTTGTCAATGTTGCTTCGGAGTAATA
                      ____________________________________________________________
consensus ATGAGGTTTTGTCTTTTCCTTAAACTAAGATTGGGTTGTCAATGTTGCTTCGGAGTAATA
 
. : . : . : . : . : . :
rJMFF049J13+ TGAATACATATTTTGTGTGCT
rJMFF050N15+ TGAATACATATTTTGTGTGCT
rJMSF002K23+ TGAATACATATTTTGTGTGCTAAACTAGATTTTCCTTTAATCCACACAACTTTTGATAGC
                      ____________________________________________________________
consensus TGAATACATATTTTGTGTGCTAAACTAGATTTTCCTTTAATCCACACAACTTTTGATAGC
 
. : . : . : . : . : . :
rJMSF002K23+ ATTGTAAGAGTACCGTTTCTGTTAGGTGCAAAGATGCTGATATCCATTTTTATAGGAGTA
                      ____________________________________________________________
consensus ATTGTAAGAGTACCGTTTCTGTTAGGTGCAAAGATGCTGATATCCATTTTTATAGGAGTA