Contig 001261:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021I03Sequence549001261 (9)ref|XP_009801737.1|1e-37PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]718001261 (9)ref|XP_009801737.1|6e-38PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]
JMFN041K14Sequence623001261 (9)ref|XP_009801737.1|3e-38PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]
JMFN042G09Sequence588001261 (9)emb|CDP07388.1|1e-33unnamed protein product [Coffea canephora]
JMSF001I08Sequence691001261 (9)emb|CDP07388.1|2e-29unnamed protein product [Coffea canephora]
JMSF001J08Sequence261001261 (9)ref|XP_009801737.1|7e-07PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]796001261 (9)emb|CDP07388.1|3e-34unnamed protein product [Coffea canephora]
JMSF002J08Sequence673001261 (9)ref|NP_001241283.1|8e-26uncharacterized protein LOC100800959 [Glycine max] gb|ACU17287.1| unknown [Glyci
JMSF047C01Sequence645002436 (12)gb|EPS57680.1|2e-103pyruvate kinase, partial [Genlisea aurea]688001261 (9)emb|CDP07388.1|2e-34unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF047C01+                                   TTTTATCCACAACAGTGAAATTTCAACGATCCAAT
JMFN041K14-                                    TTTTATCCACAACAGCGAAATTTCAACGATCCAAT
JMFF021I03-                                    TTTTATCCACAACAGCGAAATTTCAACGATCCAAT
JMSF001J08-                                    TTTTATCCACAACAGCGAAATTTCAACGATCCAAT
rJMFF021I03+                  GCTATCCAGATTACACTTTTTATCCACAACAGCGAAATTTCAACGATCCAAT
                      ____________________________________________________________
consensus                     GCTATCCAGATTACACTTTTTATCCACAACAGCGAAATTTCAACGATCCAAT
 
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rJMSF047C01+          TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
JMFN041K14-           TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
JMFF021I03-           TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
JMSF001J08-           TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
rJMFF021I03+          TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
                      ____________________________________________________________
consensus             TCATAATGGCTTCCACATCTGCTTCGTTTCTTCTCTCTTCTCCGTTCGTCGGTTCCGCGA
 
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rJMSF047C01+          TTTNCCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
JMFN041K14-           TTT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
JMFF021I03-           TTT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
JMSF001J08-           TTT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
rJMFF021I03+          TTT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
JMFN042G09-                                             TCAGTTTCCGACGGCCGGTTTCCGTC
rJMSF001J08+           TT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
                      ____________________________________________________________
consensus             TTT-CCGCGGCGGAGGTTGCTCGGCCGAGGTGCGTCAGTTTCCGACGGCCGGTTTCCGTC
 
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rJMSF047C01+          TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
JMFN041K14-           TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
JMFF021I03-           TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
JMSF001J08-           TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
rJMFF021I03+          TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
JMFN042G09-           TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
rJMSF001I08+                          CGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATNCGAC
rJMSF002J08+                                                       AGTTCGCTATACGAC
rJMSF001J08+          TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
                      ____________________________________________________________
consensus             TCCGCCTCCTGCGCGACGGCCGAGAGGACCGCGCAGACTCCGCAGAGTTCGCTATACGAC
 
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rJMSF047C01+          GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
JMFN041K14-           GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
JMFF021I03-           GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
JMSF001J08-           GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAG                           
rJMFF021I03+          GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
JMFN042G09-           GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
rJMSF001I08+          GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
rJMSF002J08+          GTTCTAGGGATTCGGNCGGGCGCCTCGGGCCANGAAATCAAAGCGGCGTACCGGAGATTG
rJMSF001J08+          GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
                      ____________________________________________________________
consensus             GTTCTAGGGATTCGGACGGGCGCCTCGGGCCAGGAAATCAAAGCGGCGTACCGGAGATTG
 
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rJMSF047C01+          GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
JMFN041K14-           GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
JMFF021I03-           GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
rJMFF021I03+          GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
JMFN042G09-           GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
rJMSF001I08+          GCTAGGGTTTTNCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
rJMSF002J08+          GCTAGGGTTTNGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
rJMSF001J08+          GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
                      ____________________________________________________________
consensus             GCTAGGGTTTTGCACCCCGACGTGGCGTCCGGCAGCGTAATGCGGGAGTCGGCGGCGGCG
 
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rJMSF047C01+          GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
JMFN041K14-           GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
JMFF021I03-           GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
rJMFF021I03+          GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
JMFN042G09-           GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
rJMSF001I08+          GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
rJMSF002J08+          GCGGCGTCGCCGGCGGAGGNTTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
rJMSF001J08+          GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
                      ____________________________________________________________
consensus             GCGGCGTCGCCGGCGGAGGATTTCATCAGAGTTCACGCGGCGTACTCCACTCTCTCCGAT
 
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rJMSF047C01+          CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
JMFN041K14-           CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
JMFF021I03-           CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
rJMFF021I03+          CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
JMFN042G09-           CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
rJMSF001I08+          CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
rJMSF002J08+          CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCNTGCTGCCTCG
rJMSF001J08+          CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
                      ____________________________________________________________
consensus             CCGGAAAAGCGCGCCAATTACGACCGCTCGCTCCTCCGATCTCGGCATCCTGCTGCCTCG
 
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rJMSF047C01+          GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
JMFN041K14-           GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
JMFF021I03-           GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTANAAAATGGGAGACAGATCAATGCTGG
rJMFF021I03+          GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
JMFN042G09-           GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
rJMSF001I08+          GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
rJMSF002J08+          GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAANGNTGG
rJMSF001J08+          GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
                      ____________________________________________________________
consensus             GTGAGAGGATACTCCGGCCGCAGATCTGCTCTTAGAAAATGGGAGACAGATCAATGCTGG
 
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rJMSF047C01+          TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
JMFN041K14-           TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
JMFF021I03-           TAGCTCCGGCGCCGCCGCA                                         
rJMFF021I03+          TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
JMFN042G09-           TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
rJMSF001I08+          TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
rJMSF002J08+          TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
rJMSF001J08+          TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
                      ____________________________________________________________
consensus             TAGCTCCGGCGCCGCCGCAGATCGCGGAAATTCATGTTCTTCTTCTTTGATAGGTGCAGA
 
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rJMSF047C01+          TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
JMFN041K14-           TCTNCACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTA           
rJMFF021I03+          TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
JMFN042G09-           TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
rJMSF001I08+          TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
rJMSF002J08+          TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGNTTGTAGNTAGGTTTGA
rJMSF001J08+          TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
                      ____________________________________________________________
consensus             TCTCAACACTTTGTACAGAATCGACTCGAATTTGAGATTCGAGTTTGTAGCTAGGTTTGA
 
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rJMSF047C01+          TG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTT                   
rJMFF021I03+          TG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTTTGAAGTCTGAATCCGTATC
JMFN042G09-           TG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTTTGAAGTCTGAATCCGTATC
rJMSF001I08+          TGACTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTTTGAAGTCTGAATCCGTATC
rJMSF002J08+          NG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTNNGAAGTGTGAATCCGTATC
rJMSF001J08+          TG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTTTGAAGTCTGAATCCGTATC
                      ____________________________________________________________
consensus             TG-CTAAAGTTCATTGTGATTTACATTCAGACGCTTATTTTTGAAGTCTGAATCCGTATC
 
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rJMFF021I03+          ATGAA                                                       
JMFN042G09-           ATGAATGAAACAAAAGAAGTTTC                                     
rJMSF001I08+          ATGAATGAAACAAAAGAAGTTTCTAATTTCTGCGGATTGTTTNGACTTNTGAACTGCGTA
rJMSF002J08+          NTGAATGAAACAAAAGAAGTTTCTAATTTNTGCGGATTGTTNNGNCTTCTGAACTGCGTA
rJMSF001J08+          ATGAATGAAACAAAAGAAGTTTCTAATTTCTGCGGATTGTTTTGACTTCTGAACTGCGTA
                      ____________________________________________________________
consensus             ATGAATGAAACAAAAGAAGTTTCTAATTTCTGCGGATTGTTTTGACTTCTGAACTGCGTA
 
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rJMSF001I08+          ATCTGAAACGTCACAACAATATTTGACTTCACAGAAATTCAAACNCTTGTCTAGAA    
rJMSF002J08+          ATCTGAAACGTCACAACAATATTTGACTTCACAGAAATTCAAACACTTGTCTAGAACTAA
rJMSF001J08+          ATCTGAAACGTCACAACAATATTTGACTTCACAGAAATTCAAACACTTGTCTAGAACTAA
                      ____________________________________________________________
consensus             ATCTGAAACGTCACAACAATATTTGACTTCACAGAAATTCAAACACTTGTCTAGAACTAA
 
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rJMSF002J08+          TTGGATAATCAACAAAATCAGACTCTT                                 
rJMSF001J08+          TTGGATAATCAACAAAATCAGACTCTTCTGTAACGTTTGGCACCTCTTCCGGGTCGCGCT
                      ____________________________________________________________
consensus             TTGGATAATCAACAAAATCAGACTCTTCTGTAACGTTTGGCACCTCTTCCGGGTCGCGCT