| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010A09 | Sequence | 450 | 001259 (7) | gb|EYU24699.1| | 6e-54 | hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata] | 501 | 001259 (7) | gb|EYU24699.1| | 1e-53 | hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata] |
| JMFF021P01 | Sequence | 540 | 001259 (7) | ref|XP_009611259.1| | 6e-55 | PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777 | 506 | 001259 (7) | ref|XP_009611259.1| | 4e-55 | PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777 |
| JMFN030D20 | Sequence | 489 | 001259 (7) | gb|EYU24699.1| | 1e-54 | hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata] | |||||
| JMSF001C19 | Sequence | 249 | 001259 (7) | emb|CDO98037.1| | 4e-43 | unnamed protein product [Coffea canephora] | 443 | 001259 (7) | ref|XP_009611259.1| | 2e-55 | PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777 |
This contig is upended
. : . : . : . : . : . :
rJMFF010A09- AGCATTCAAAACAAATTTACTG
JMFN030D20+ AGCATTCAAAACAAATTTACTG
rJMFF021P01- AAAAGAGCATTCAAAACAAATTTACTG
____________________________________________________________
consensus AAAAGAGCATTCAAAACAAATTTACTG
. : . : . : . : . : . :
rJMFF010A09- TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
JMFN030D20+ TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
JMFF010A09+ AACATAAACACAGCTAAGGATTGAATGGTCA
rJMFF021P01- TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
rJMSF001C19- CACAGCTAAGGATTGAATGGTCA
____________________________________________________________
consensus TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
. : . : . : . : . : . :
rJMFF010A09- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
JMFN030D20+ CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
JMFF010A09+ CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
rJMFF021P01- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
rJMSF001C19- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
____________________________________________________________
consensus CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
. : . : . : . : . : . :
rJMFF010A09- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFN030D20+ TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFF010A09+ TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
rJMFF021P01- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFF021P01+ CTTCAAGCAGAAGCTGCTGCTGCCT
rJMSF001C19- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
____________________________________________________________
consensus TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
. : . : . : . : . : . :
rJMFF010A09- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFN030D20+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFF010A09+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
rJMFF021P01- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFF021P01+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMSF001C19+ GAGGCACGT
rJMSF001C19- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
____________________________________________________________
consensus TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
. : . : . : . : . : . :
rJMFF010A09- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMFN030D20+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTTTACGGATCGCCTTCACGCTCC
JMFF010A09+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
rJMFF021P01- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMFF021P01+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMSF001C19+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
rJMSF001C19- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
____________________________________________________________
consensus TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
. : . : . : . : . : . :
rJMFF010A09- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCAAAAGCCGAGCAGCGGCTCTTCTGGA
JMFN030D20+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMFF010A09+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCAAAAGCCGAGCAGCGGCTCTTCTGGA
rJMFF021P01- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMFF021P01+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMSF001C19+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
rJMSF001C19- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
____________________________________________________________
consensus AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
. : . : . : . : . : . :
rJMFF010A09- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFN030D20+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFF010A09+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
rJMFF021P01- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFF021P01+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMSF001C19+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
rJMSF001C19- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
____________________________________________________________
consensus GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
. : . : . : . : . : . :
rJMFF010A09- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMFN030D20+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAAC
JMFF010A09+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
rJMFF021P01- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMFF021P01+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMSF001C19+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
rJMSF001C19- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACTC
____________________________________________________________
consensus CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACTC