| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS022E06 | Sequence | 598 | 001258 (4) | ref|XP_009616698.1| | 4e-35 | PREDICTED: cyclin-T1-4-like [Nicotiana tomentosiformis] ref|XP_009616699.1| PRED | |||||
| JMSF001B22 | Sequence | 297 | 005045 (4) | 728 | 001258 (4) | emb|CAN74426.1| | 1e-22 | hypothetical protein VITISV_010983 [Vitis vinifera] | |||
| JMSF037D08 | Sequence | 678 | 005045 (4) | ref|XP_011086564.1| | 4e-43 | PREDICTED: cyclin-T1-3-like [Sesamum indicum] | 794 | 001258 (4) | emb|CAN74426.1| | 2e-25 | hypothetical protein VITISV_010983 [Vitis vinifera] |
| JMSF038K05 | Sequence | 703 | 005045 (4) | ref|XP_011086564.1| | 3e-48 | PREDICTED: cyclin-T1-3-like [Sesamum indicum] | 928 | 001258 (4) | emb|CAN74426.1| | 2e-66 | hypothetical protein VITISV_010983 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF038K05+ TTTGGTGATGGTGAGACTAGTG
____________________________________________________________
consensus TTTGGTGATGGTGAGACTAGTG
. : . : . : . : . : . :
rJMSF038K05+ ATAAGCATAATCATGAAAGAGAGCCATTGCATTACCAGATCGGTGGGGAAGTACAAAACC
____________________________________________________________
consensus ATAAGCATAATCATGAAAGAGAGCCATTGCATTACCAGATCGGTGGGGAAGTACAAAACC
. : . : . : . : . : . :
JMFS022E06- CATGGTGAAGAAGACCGAGAACGAAATGCTGGGAGAA
rJMSF038K05+ GATCAAAGTCTAGTCTTGACAGCCATGGTGAAGAAGACCTGGAAGGGAATGCTGGGAGAA
____________________________________________________________
consensus GATCAAAGTCTAGTCTTGACAGCCATGGTGAAGAAGACCTGGAAGGGAATGCTGGGAGAA
. : . : . : . : . : . :
JMFS022E06- CTGAAACAAGGGATAAGGGGGAATTGAAGGACAAGTACTATGGTCGAGCTTTGGAGCGCA
rJMSF038K05+ GTGAAACAAGAGATAAGGCAGAACTGAAGGACAAGTTCCATGGTCGGGCCTTGGAGCACA
____________________________________________________________
consensus GTGAAACAAGGGATAAGGGGGAATTGAAGGACAAGTTCTATGGTCGGGCTTTGGAGCGCA
. : . : . : . : . : . :
JMFS022E06- AGGATGGTGCAGTTGGTCAATCACCGCAGGAGGTGATTAAAAAGATTGACAAAGACAAGG
rJMSF038K05+ AGGATGGCATGGTTGGCCAATCACCACAAGAGGTTATCAAGAAGATTGACAAAGACAAGG
____________________________________________________________
consensus AGGATGGTGTGGTTGGTCAATCACCGCAGGAGGTTATTAAGAAGATTGACAAAGACAAGG
. : . : . : . : . : . :
JMFS022E06- TCAAAGCAGCACTTGAGAGGAACAGGAAGTCCCGTGGGGATTCAACTAGGAAAGTTGATT
rJMSF038K05+ TCAAAGCAGCACTTGAGAGAAACAGAAAGTCCCGCGGGGATGCACCTAGGAAAGTAGATG
____________________________________________________________
consensus TCAAAGCAGCACTTGAGAGGAACAGGAAGTCCCGTGGGGATTCACCTAGGAAAGTTGATT
. : . : . : . : . : . :
JMFS022E06- ACATGGATGAGGATGATCTCATTGAAAGAGAATTGGAGGATGGAATAGAGTTAGCTGCCG
rJMSF038K05+ TATTGGATGATGACGATCTCATTGAAAGAGAATTGGAGGATGGAATAGAGTTAGCTGCTG
____________________________________________________________
consensus TCTTGGATGATGATGATCTCATTGAAAGAGAATTGGAGGATGGAATAGAGTTAGCTGCTG
. : . : . : . : . : . :
JMFS022E06- AGAATGAAAAAAACAAACGTGAAAGAAAACAAAGCTGGTCTAAATCTTCAATCAAGTCAG
rJMSF038K05+ AGGCTGAAAAGAACAAGCGGGAAAAAAAACAAAGTTGGTCTAAACCTTCAAACAGGCCAG
____________________________________________________________
consensus AGGCTGAAAAGAACAAGCGTGAAAGAAAACAAAGTTGGTCTAAATCTTCAATCAGGTCAG
. : . : . : . : . : . :
JMFS022E06- AGCATGA
rJMSF038K05+ AGCATGACAATGCACATCACATGAAGCATCAAGATGACTCTGGTGATAGACATTACCAAG
rJMSF037D08+ TACCCAG
____________________________________________________________
consensus AGCATGACAATGCACATCACATGAAGCATCAAGATGACTCTGGTGATAGACATTACCCAG
. : . : . : . : . : . :
rJMSF038K05+ GAATGAAAGGGCAGTCCTTGCAAAATGATGATTATGAGAATAACGTGGAAGAGGGAGAAT
rJMSF037D08+ GAATGAAAGGGCAGTCC-TGCAAAATGATGATTATGAGAATAACGTGGAAGAGGGAGAAT
rJMSF001B22+ GGGAGAAT
____________________________________________________________
consensus GAATGAAAGGGCAGTCCTTGCAAAATGATGATTATGAGAATAACGTGGAAGAGGGAGAAT
. : . : . : . : . : . :
rJMSF038K05+ TCGAACCTTACGATGATGCTGACAGGGGTGGTTACCATTCACCTAAGTCAATCAACCGTA
rJMSF037D08+ TCGNACCTTACGATGATGCTGACAGGGGTGGTTACCATTCACCTAAGTCAATCAACCGTA
rJMSF001B22+ TCGAACCTTACGATGATGCTGACAGGGGTGGTTACCATTCACCTAAGTCAATCAACCGTA
____________________________________________________________
consensus TCGAACCTTACGATGATGCTGACAGGGGTGGTTACCATTCACCTAAGTCAATCAACCGTA
. : . : . : . : . : . :
rJMSF038K05+ AGCGAAAGGCAAGTAGCCCTCCTGTGGATGGTAAGCATCGACACGAGTATATGTCAGCAA
rJMSF037D08+ AGCGAAAGGCAAGTAGCCCTCCTGTGGATGGTAAGCATCGACACGAGTATATGTCAGCAA
rJMSF001B22+ AGCGAAAGGCAAGTAGCCCTCCTGTGGATGGTAAGCATCGACACGAGTATATGTCAGCAA
____________________________________________________________
consensus AGCGAAAGGCAAGTAGCCCTCCTGTGGATGGTAAGCATCGACACGAGTATATGTCAGCAA
. : . : . : . : . : . :
rJMSF038K05+ GCCACAATCACACATACCATGACTTCCCAGAGGATAGAAATAGGACAGGGAGACTTGGTT
rJMSF037D08+ GCCACAATCACACATACCATGACTTCCCAGAGGATAGAAATAGGACAGGGAGACTTGGTT
rJMSF001B22+ GCCACAATCACACATACCATGACTTCCCAGAGGATAGAAATAGGACAGGGAGACTTGGTT
____________________________________________________________
consensus GCCACAATCACACATACCATGACTTCCCAGAGGATAGAAATAGGACAGGGAGACTTGGTT
. : . : . : . : . : . :
rJMSF038K05+ ATTCAGAAAGGGACCACAAAAGGCACGCACAGGAGAATCACGTGTAGAATGCTTTAGAGT
rJMSF037D08+ ATTCAGAAAGGGACCACAAAAGGCACGCACAGGAGAATCACGTGTAGAATGCTTTAGAGT
rJMSF001B22+ ATTCAGAAAGGGACCACAAAAGGCACGCACAGGAGAATCACGTGTAGAATGCTTTAGAGT
____________________________________________________________
consensus ATTCAGAAAGGGACCACAAAAGGCACGCACAGGAGAATCACGTGTAGAATGCTTTAGAGT
. : . : . : . : . : . :
rJMSF038K05+ GTAATAGCAGCACCATGTCTTAGTTATGAACATTATACAAGGTCGGTGAAGCAGAGTTTT
rJMSF037D08+ GTAATAGCAGCACCATGTCTTAGTTATGAACATTATACAAGGTCGGTGAAGCAGAGTTTT
rJMSF001B22+ GTAATAGCAGCACCATGTCTTAGTTATGAACATTATACAAGGTCGGTGAAGCAGAGTTTT
____________________________________________________________
consensus GTAATAGCAGCACCATGTCTTAGTTATGAACATTATACAAGGTCGGTGAAGCAGAGTTTT
. : . : . : . : . : . :
rJMSF038K05+ CAAGGTTAGTACAGTTGTGATCTCCGCCTGTGGTTTGGTTTATCTTGCTAAACAATTTTG
rJMSF037D08+ CAAGGTTAGTACAGTTGTGATCTCCGCCTGTGGTTTGGTTTATCTTGCTAAACAATTTTG
rJMSF001B22+ CAAGGTTAGTACAGTTGTGATCTCCGCCTGTGGTTTGGTTTATCTTGCTAAACAATTTTG
____________________________________________________________
consensus CAAGGTTAGTACAGTTGTGATCTCCGCCTGTGGTTTGGTTTATCTTGCTAAACAATTTTG
. : . : . : . : . : . :
rJMSF038K05+ GACAGC
rJMSF037D08+ GACAGCATAAATCTTGAATTGGTCATGGTTCTGAAATTCCTACAGATTTGGGTGGTGAAA
rJMSF001B22+ GACAGCATAAATCTTGAATTGGTCATGGTTCTGAAATTCCTACAGATTTGGGTGGTGAAA
____________________________________________________________
consensus GACAGCATAAATCTTGAATTGGTCATGGTTCTGAAATTCCTACAGATTTGGGTGGTGAAA
. : . : . : . : . : . :
rJMSF037D08+ CACAGCTTTATTGGGTAGGACTGTAGGATTGTGATGGAAGTCCATGCTTTGAGGTGCTAA
rJMSF001B22+ CACAGCTTTATTGGGTAGGACTGTAGGATTGTGATGGAAGTCCATGCTTTGAGGTGCTAA
____________________________________________________________
consensus CACAGCTTTATTGGGTAGGACTGTAGGATTGTGATGGAAGTCCATGCTTTGAGGTGCTAA
. : . : . : . : . : . :
rJMSF037D08+ ATTTTTTTTGGGTCAGCTTAAATCTTCAATTGATTAGATAATATCTATTTATAGAATCAA
rJMSF001B22+ ATTTTTTTTGGGTCAGCTTAAATCTTCAATTGATTAGATAATATCTATTTATAGAATCAA
____________________________________________________________
consensus ATTTTTTTTGGGTCAGCTTAAATCTTCAATTGATTAGATAATATCTATTTATAGAATCAA
. : . : . : . : . : . :
rJMSF037D08+ AATTCAAAATGTGTAACATTATTTTTCCTTAGGGCGTGGGGACGGACTATACACGCTCCC
rJMSF001B22+ AATTCAAAATGTGTAACATTATTTTTCCTTAGGGCGTGGGGACGGACTATACACGCTCCC
____________________________________________________________
consensus AATTCAAAATGTGTAACATTATTTTTCCTTAGGGCGTGGGGACGGACTATACACGCTCCC
. : . : . : . : . : . :
rJMSF037D08+ CGTCTCCCCTCCCACACATTTTCCTGCTTCCCATCATACATGTTAAGAGTCCCAGGATCG
rJMSF001B22+ CGTCTCCCCTCCCACACATTTTCCTGCTTCCCATCATACATGTTAAGAGTCCCAGGATCG
____________________________________________________________
consensus CGTCTCCCCTCCCACACATTTTCCTGCTTCCCATCATACATGTTAAGAGTCCCAGGATCG
. : . : . : . : . : . :
rJMSF037D08+ GTTGTATTTTATGGTAGTTGTATAAGTTATCCCCATGGGCTTAAATAACCATTGGGCACA
rJMSF001B22+ GTTGTATTTTATGGTAGTTGTATAAGTTATCCCCATGGGCTTAAATAACCATTGGGCACA
____________________________________________________________
consensus GTTGTATTTTATGGTAGTTGTATAAGTTATCCCCATGGGCTTAAATAACCATTGGGCACA