| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF051C16 | Sequence | 532 | 001255 (8) | ref|XP_009789164.1| | 8e-105 | PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris] | 449 | 001255 (8) | ref|XP_011073788.1| | 2e-44 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] |
| JMFF051O16 | Sequence | 600 | 001255 (8) | ref|XP_011073788.1| | 2e-121 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] | 524 | 001255 (8) | ref|XP_011073788.1| | 5e-52 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] |
| JMSF006C06 | Sequence | 330 | 001255 (8) | ref|XP_008793237.1| | 3e-56 | PREDICTED: 60S ribosomal protein L13a-4 [Phoenix dactylifera] | 383 | 001255 (8) | ref|XP_011073788.1| | 7e-48 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] |
| JMSF029C22 | Sequence | 619 | 001255 (8) | ref|XP_011073788.1| | 8e-123 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] | 696 | 001255 (8) | ref|XP_011073788.1| | 2e-127 | PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF029C22- GATACATCA
____________________________________________________________
consensus GATACATCA
. : . : . : . : . : . :
JMFF051O16- CAGCAGTTGAGCTCAACGAGACAACAACTCCTTTCCGGCGAGGTAAGTAGC
JMSF006C06- CAGCAGTTGAGCTCAACGAGACAACAACTCCTTTCCGGCGAGGTAAGTAGC
JMSF029C22- CAATTCACACAGCAGTTGAGCTCAACGAGACAACAACTCCTTTCCGGCGAGGTAAGTAGC
____________________________________________________________
consensus CAATTCACACAGCAGTTGAGCTCAACGAGACAACAACTCCTTTCCGGCGAGGTAAGTAGC
. : . : . : . : . : . :
JMFF051O16- AAAATGGTGTCCGGATCGGGAATCTGCGCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
JMFF051C16- AAAATGGTGTCCGGATCGGGAATCTGCGCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
JMSF006C06- AAAATGGTGTCCGGATCGGGAATCTGCGCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
JMSF029C22- AAAATGGTGTCCGGATCGGGAATCTGCGCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
rJMSF029C22+ GCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
____________________________________________________________
consensus AAAATGGTGTCCGGATCGGGAATCTGCGCTCGGAGAGTGGTGGTGGACGCAAGGCACCAC
. : . : . : . : . : . :
JMFF051O16- ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
JMFF051C16- ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
JMSF006C06- ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
JMSF029C22- ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
rJMSF029C22+ ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
____________________________________________________________
consensus ATGTTGGGACGTCTGGCATCCATCTTGGCCAAGGAGCTGCTCAATGGACAGCGTGTGGTG
. : . : . : . : . : . :
JMFF051O16- GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
JMFF051C16- GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
JMSF006C06- GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
JMSF029C22- GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
rJMSF029C22+ GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
____________________________________________________________
consensus GTGGTCCGCTGCGAAGAAATCTGCCTCTCCGGCGGCCTTGTCCGTCAGAAAATGAAGTAC
. : . : . : . : . : . :
JMFF051O16- CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
JMFF051C16- CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
JMSF006C06- CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
JMSF029C22- CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
rJMSF029C22+ CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
____________________________________________________________
consensus CACCGCTTCCTCCGCAAGCGCATGAACACCAAGCCCTCACACGGTCCCATCCATTTCCGT
. : . : . : . : . : . :
JMFF051O16- GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAATGATTCCGCACAAGACTAAGAGA
JMFF051C16- GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAATGATTCCGCACAAGACTAAGAGA
JMSF006C06- GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAA
JMSF029C22- GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAATGATTCCGCACAAGACTAAGAGA
rJMSF029C22+ GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAATGATTCCGCACAAGACTAAGAGA
____________________________________________________________
consensus GCACCATCTAAGATTCTCTGGCGCACCATCCGAGGAATGATTCCGCACAAGACTAAGAGA
. : . : . : . : . : . :
JMFF051O16- GGAGCTGCCGCTCTGGCTCGATTGAAGGTCTACGAGGGTGTTCCTCCGCCGTATGATAAG
JMFF051C16- GGAGCTGCCGCTCTGGCTCGATTGAAGGTCTACGAGGGTGTTCCTCCGCCGTATGATAAG
JMSF029C22- GGAGCTGCCGCTCTGGCTCGATTGAAGGTCTACGAGGGTGTTCCTCCGCCGTATGATAAG
rJMSF006C06+ TTCCTCCGCCGTATGATAAG
rJMSF029C22+ GGAGCTGCCGCTCTGGCTCGATTGAAGGTCTACGAGGGTGTTCCTCCGCCGTATGATAAG
rJMFF051C16+ GTATGATAAG
rJMFF051O16+ CTCGATTGAAGGTCTACGAGGGTGTCTCTCCGCCGTATGATAAG
____________________________________________________________
consensus GGAGCTGCCGCTCTGGCTCGATTGAAGGTCTACGAGGGTGTTCCTCCGCCGTATGATAAG
. : . : . : . : . : . :
JMFF051O16- GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
JMFF051C16- GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
JMSF029C22- GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
rJMSF006C06+ GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
rJMSF029C22+ GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
rJMFF051C16+ GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
rJMFF051O16+ GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
____________________________________________________________
consensus GTTAAGCGAATGGTTATACCTGATGCCCTTAAGGTTTTGAGGCTCCAGGCTGGGCATAAG
. : . : . : . : . : . :
JMFF051O16- TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
JMFF051C16- TACTGCTTGCTGGGTAAGCTTTTCTCTGANGTCGGCTGGAACCACTATGAC
JMSF029C22- TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
rJMSF006C06+ TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
rJMSF029C22+ TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
rJMFF051C16+ TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
rJMFF051O16+ TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
____________________________________________________________
consensus TACTGCTTGCTGGGTAAGCTTTCCTCTGAGGTCGGCTGGAACCACTATGACACCATCAAG
. : . : . : . : . : . :
JMFF051O16- GTTCTAGAGAATAAGAGGGAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAAGCATTG
JMSF029C22- GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
rJMSF006C06+ GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
rJMSF029C22+ GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
rJMFF051C16+ GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
rJMFF051O16+ GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
____________________________________________________________
consensus GTTCTAGAGAATAAGAGGAAGGAGAGGGCCCAAGGAACATATGAGAGGAAGAAGCAATTG
. : . : . : . : . : . :
JMFF051O16- ACAAAGCTT
JMSF029C22- ACAAAGCTTA
rJMSF006C06+ ACAAAGCTTAGGATCAAAGCTGAGAAGGCTGCAGAGGAGAAACTTGGTTCCCAACTTGAC
rJMSF029C22+ ACAAAGCTTAGGATCAAAGCTGAGAAGGCTGCAGAGGAGAAACTTGGTTCCCAACTTGAC
rJMFF051C16+ ACAAAGCTTAGGATCAAAGCTGAGAAGGCTGCAGAGGAGAAACTTGGTTCCCAACTTGAC
rJMFF051O16+ ACAAAGCTTAGGATCAAAGCTGAGAAGGCTGCAGAGGAGAAACTTGGTTCCCAACTTGAC
____________________________________________________________
consensus ACAAAGCTTAGGATCAAAGCTGAGAAGGCTGCAGAGGAGAAACTTGGTTCCCAACTTGAC
. : . : . : . : . : . :
rJMSF006C06+ ATCCATCCTTACCTCGGTTAAGTACTAAATAAGGATCATGGAATGTTTTAGCAGATAATA
rJMSF029C22+ ATCCATCCTTACCTCGGTTAAGTACTAAATAAGGATCATGGAATGTTTTAGCAGATAATA
rJMFF051C16+ AT
rJMFF051O16+ ATCCATCCTTACCTCGGTTAAGTACTAAATAAGGATCATGGAATGTTTTAGCAGATAATA
____________________________________________________________
consensus ATCCATCCTTACCTCGGTTAAGTACTAAATAAGGATCATGGAATGTTTTAGCAGATAATA
. : . : . : . : . : . :
rJMSF006C06+ TATTTGAGCAGAGATATTGTTGTGTTTGTATTGCAATTTTTTGGTTACCTACAACGAATT
rJMSF029C22+ TATTTGAGCAGAGATATTGTTGTGTTTGTATTGCAATTTTTTGGTTACCTACAACGAATT
rJMFF051O16+ TATTTGAGCAGAGATATTGTTGTGTTTGTATTGCAATTTTTTGGTTACCTACAACGAATT
____________________________________________________________
consensus TATTTGAGCAGAGATATTGTTGTGTTTGTATTGCAATTTTTTGGTTACCTACAACGAATT
. : . : . : . : . : . :
rJMSF006C06+ ATT
rJMSF029C22+ ATT
rJMFF051O16+ ATTTGTTTGCAGTTGTTTTTCAGTTTTACTTTTGAGCTCTCCATAATATAATATTGCTTT
____________________________________________________________
consensus ATTTGTTTGCAGTTGTTTTTCAGTTTTACTTTTGAGCTCTCCATAATATAATATTGCTTT
. : . : . : . : . : . :
rJMFF051O16+ ATACCAAAAAAAAAAAAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus ATACCAAAAAAAAAAAAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG