Contig 001254:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043D06+                                                  TGGTCCTTTGGTTGCATTTG
                      ____________________________________________________________
consensus                                                     TGGTCCTTTGGTTGCATTTG
 
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rJMSF043D06+          CTTTGAGCTTGCAACAGGAGATTTTCTTTTTGACCCTCATAGTGGTGACAATTACAACAG
                      ____________________________________________________________
consensus             CTTTGAGCTTGCAACAGGAGATTTTCTTTTTGACCCTCATAGTGGTGACAATTACAACAG
 
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rJMSF043D06+          GGATGAGGATCACTTGGCATTAATGATGGAGGTCCTTGGAACAATGCCGCGTAAGATTGC
                      ____________________________________________________________
consensus             GGATGAGGATCACTTGGCATTAATGATGGAGGTCCTTGGAACAATGCCGCGTAAGATTGC
 
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rJMSF043D06+          ATTGGGTGGACGATATTCAAGGGATTTCTTCAACAGGTATGGAGACTTGAGGCATATAAG
                      ____________________________________________________________
consensus             ATTGGGTGGACGATATTCAAGGGATTTCTTCAACAGGTATGGAGACTTGAGGCATATAAG
 
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rJMSF043D06+          ACGGCTGCGATTCTGGCCTCTTAATAAAGTGCTTATGGAGAAATACGAGTTCAGCGAGCA
                      ____________________________________________________________
consensus             ACGGCTGCGATTCTGGCCTCTTAATAAAGTGCTTATGGAGAAATACGAGTTCAGCGAGCA
 
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rJMSF043D06+          AGATGCAAATGACATGGCGGATTTTCTTGTTCCCATACTTGATTATGTGCCTGACAAAAG
                      ____________________________________________________________
consensus             AGATGCAAATGACATGGCGGATTTTCTTGTTCCCATACTTGATTATGTGCCTGACAAAAG
 
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rJMSF043D06+          ACCTACTGCAGCACAGTGTNTGAATCATCCTTGGATAACTGGAGGCCCTCGGCATCTTGT
                      ____________________________________________________________
consensus             ACCTACTGCAGCACAGTGTNTGAATCATCCTTGGATAACTGGAGGCCCTCGGCATCTTGT
 
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rJMSF043D06+          GCCACCTCATGGTCATNTCCTACAAGCAATGGAAAATGGTAATGTAGAAAAGGTGGAGAA
                      ____________________________________________________________
consensus             GCCACCTCATGGTCATNTCCTACAAGCAATGGAAAATGGTAATGTAGAAAAGGTGGAGAA
 
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rJMSF043D06+          GGATGGTAGGGATGCAGTGGAAGCGGGAATGGGGAATATATCCATTGATGGAGCTCCAAA
rJMFF051N10+                                                                 CCAAA
                      ____________________________________________________________
consensus             GGATGGTAGGGATGCAGTGGAAGCGGGAATGGGGAATATATCCATTGATGGAGCTCCAAA
 
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rJMSF043D06+          GCCAGTCAAAGCTTCCCAATTGACAGTAAACCGACCTAAACAAACTTTGTAACTTAGCCA
rJMFF051N10+          GCCAGTCAAAGCTTCCCAATTGACAGTAAACCGACCTAAACAAACTTTGTAACTTAGCCA
                      ____________________________________________________________
consensus             GCCAGTCAAAGCTTCCCAATTGACAGTAAACCGACCTAAACAAACTTTGTAACTTAGCCA
 
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rJMSF043D06+          ATTATGTGCTTTTCCCTTCTTTCTTCATTTACCTTCTTTGGCCCCTTAAAAGCTCTTGGT
rJMFF051N10+          ATTATGTGCTTTTCCCTTCTTTCTTCATTTACCTTCTTTGGCCCCTTAAAAGCTCTTGGT
                      ____________________________________________________________
consensus             ATTATGTGCTTTTCCCTTCTTTCTTCATTTACCTTCTTTGGCCCCTTAAAAGCTCTTGGT
 
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rJMSF043D06+          TGTTTGTTTTGTTTGCTCCACCTGAGAAATGTATGTTAGCGCAATACCACTATCATTCTT
rJMFF051N10+          TGTTTGTTTTGTTTGCTCCCCCTGAGAAATGTATGTTAGCGCAATACCCCTATCATTCTT
                      ____________________________________________________________
consensus             TGTTTGTTTTGTTTGCTCCCCCTGAGAAATGTATGTTAGCGCAATACCCCTATCATTCTT
 
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rJMSF043D06+          TTGTGATGCTCATTTGTG                                          
rJMFF051N10+          TTGGGATGCTCATTTGTGTGGCCGAAATGTGAAATATCAATTATTATTATTTTTTTTTTC
                      ____________________________________________________________
consensus             TTGTGATGCTCATTTGTGTGGCCGAAATGTGAAATATCAATTATTATTATTTTTTTTTTC