Contig 001252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015B17Sequence565019511emb|CBI27033.3|1e-26unnamed protein product [Vitis vinifera]742001252 (3)ref|XP_011077070.1|5e-23PREDICTED: uncharacterized protein LOC105161154 isoform X2 [Sesamum indicum] re
JMFF051H10Sequence551001252 (3)emb|CAN78632.1|6e-37hypothetical protein VITISV_000033 [Vitis vinifera]475001252 (3)emb|CBI27035.3|2e-08unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF051H10-                 CGGCATTGTTGTCAGGAAAGAATCTGAAGACAGGCTACATATCTATTTTCCAGG
                      ____________________________________________________________
consensus                   CGGCATTGTTGTCAGGAAAGAATCTGAAGACAGGCTACATATCTATTTTCCAGG
 
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JMFF051H10-           AGAGAAAGAAACGCATATCTTTGGTCACGGTGACTTGAGGCATTCACAAGAATGGTTGGC
                      ____________________________________________________________
consensus             AGAGAAAGAAACGCATATCTTTGGTCACGGTGACTTGAGGCATTCACAAGAATGGTTGGC
 
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JMFF051H10-           TGATGGTTGGAAACATCTTAAGGAAAGACATGAGCTTGTATCAGTGTTGTTGAGTGACTC
                      ____________________________________________________________
consensus             TGATGGTTGGAAACATCTTAAGGAAAGACATGAGCTTGTATCAGTGTTGTTGAGTGACTC
 
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JMFF051H10-           AACAGTGAAGCAAACAGTAAAAGAGTCAAGTGATGTCATACTGGAACAACATACCACATG
rJMFF015B17+               TGAAGCAAACAGTAAAAGAGTCAAGTGATGTCATACTGGAACAACATACCACATG
                      ____________________________________________________________
consensus             AACAGTGAAGCAAACAGTAAAAGAGTCAAGTGATGTCATACTGGAACAACATACCACATG
 
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JMFF051H10-           TAGCAATGGTGTCCATCATCTAAGTACTGAAAAACCAAGAGATGAAGTTGCATCAGGATC
rJMFF015B17+          TAGCAATGGTGTCCATCATCTAAGTACTGAAAAACCAAGAGATGAAGTTGCATCAGGATC
                      ____________________________________________________________
consensus             TAGCAATGGTGTCCATCATCTAAGTACTGAAAAACCAAGAGATGAAGTTGCATCAGGATC
 
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JMFF051H10-           AGGTAATACTGATGCAGATGCTGGTGAGAGATTAAAAGTGTTGGAGGGGGTCCGTGATCT
rJMFF015B17+          AGGTAATACTGATGCAGATGCTGGTGAGAGATTAAAAGTGTTGGAGGGGGTCCGTGATCT
                      ____________________________________________________________
consensus             AGGTAATACTGATGCAGATGCTGGTGAGAGATTAAAAGTGTTGGAGGGGGTCCGTGATCT
 
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JMFF051H10-           GTCTAAAGATAATCGACTGGCTCAGTTAAGGTGGAAGACATCGGGGAAGAGAAGACGGTG
rJMFF015B17+          GTCTAAAGATAATCGACTGGCTCAGTTAAGGTGGAAGACATCGGGGAAGAGAAGACGGTG
                      ____________________________________________________________
consensus             GTCTAAAGATAATCGACTGGCTCAGTTAAGGTGGAAGACATCGGGGAAGAGAAGACGGTG
 
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JMFF051H10-           TAGAAGCCCTGTTAACAAGGTGCGTTTGAGTTCTGAGAGAAATCGAAATGTCACCAAGGA
rJMFF015B17+          TAGAAGCCCTGTTAACAAGGTGCGTTTGAGTTCTGAGAGAAATCGAAATGTCACCAAGGA
                      ____________________________________________________________
consensus             TAGAAGCCCTGTTAACAAGGTGCGTTTGAGTTCTGAGAGAAATCGAAATGTCACCAAGGA
 
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JMFF051H10-           ATCTGGTATGCAAATTAAGGAGACGCTCTTCATCCCATCATCCTTGAANGTGGATCTTGA
rJMFF015B17+          ATCTGGTATGCAAATTAAGGAGACGCTCTTCATCCCATCATCCTTGAAGGTGGATCTTGA
rJMFF051H10+               GTATGCAAATTAAGGAGACGCTCTTCATCCCATCATCCTGNAAGGTGGATCTTGA
                      ____________________________________________________________
consensus             ATCTGGTATGCAAATTAAGGAGACGCTCTTCATCCCATCATCCTTGAAGGTGGATCTTGA
 
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JMFF051H10-           CNATTGTAAATACATCA                                           
rJMFF015B17+          CAATTGTAAATACATCACCGATTCCCTCTTCAACTCCTCTGTTGTGTCTCCATTAACTAA
rJMFF051H10+          CAATTGTAAATACATCACCGATTCCCTCTTCAACTCCTCTGTTGTGTCTCCATTAACTAA
                      ____________________________________________________________
consensus             CAATTGTAAATACATCACCGATTCCCTCTTCAACTCCTCTGTTGTGTCTCCATTAACTAA
 
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rJMFF015B17+          CCTGGTCATGTCTAGGTGATGACCACCTTCACTTCACAATCAGTTTAGAGTGTGTGTTGT
rJMFF051H10+          CCTGGTCATGTCTAGGTGATGACCACCTTCACTTCACAATCAGTTTAGAGTGTGTGTTGT
                      ____________________________________________________________
consensus             CCTGGTCATGTCTAGGTGATGACCACCTTCACTTCACAATCAGTTTAGAGTGTGTGTTGT
 
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rJMFF015B17+          GTACATGGTTCAAAATGATCTGAAGCAGTTGTTGTAGGCCTTTGACAGGTTTTCTTTTCA
rJMFF051H10+          GTACATGGTTCAAAATGATCTGAAGCAGTTGTTGTAGGCCTTTGACAGGTTTTCTTTTCA
                      ____________________________________________________________
consensus             GTACATGGTTCAAAATGATCTGAAGCAGTTGTTGTAGGCCTTTGACAGGTTTTCTTTTCA
 
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rJMFF015B17+          GCATGGGAAATGTTTTTAGTGAAGCTGGTGAGGCATTCCAAAAATCCATTCCCCTGTATA
rJMFF051H10+          GCATGGGAAATGTTTTTAGTGAAGCTGGTGAGGCATTCCAAAAATCCATTCCCCTGTATA
                      ____________________________________________________________
consensus             GCATGGGAAATGTTTTTAGTGAAGCTGGTGAGGCATTCCAAAAATCCATTCCCCTGTATA
 
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rJMFF015B17+          AATTTGTAAGAAGTAGGAGGTAGCCTGCCTGGTGTGTATACTGACCATCAGGAATCAGTT
rJMFF051H10+          AATTTGTAAGAAGTAGGAGGTAGCCTGCCTGGTGTGTATACTGACCATCAGGAATCAGTT
                      ____________________________________________________________
consensus             AATTTGTAAGAAGTAGGAGGTAGCCTGCCTGGTGTGTATACTGACCATCAGGAATCAGTT
 
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rJMFF015B17+          TTGATTCAATAGAATAACCTTTTAGAGGTCAGAGTTATGTTCCTAAATTTCTGCTTGTAT
rJMFF051H10+          TTGATTCAATAGAATAACCTTTTAGAGGTCAGAGTTATGTTCCTAAATTTCTGCTTGTAT
                      ____________________________________________________________
consensus             TTGATTCAATAGAATAACCTTTTAGAGGTCAGAGTTATGTTCCTAAATTTCTGCTTGTAT
 
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rJMFF015B17+          TCTGCAATTGCTTTCTTTGCGATACCA                                 
rJMFF051H10+          TCTGCAATTTCTTTCTTTGCGATACCAATAAAGTTTTCTTCTTTCTTCATTATCGTAAAG
                      ____________________________________________________________
consensus             TCTGCAATTTCTTTCTTTGCGATACCAATAAAGTTTTCTTCTTTCTTCATTATCGTAAAG