| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005A05 | Sequence | 492 | 021640 | ref|XP_010260740.1| | 2e-46 | PREDICTED: ALA-interacting subunit 3 [Nelumbo nucifera] | 693 | 001250 (6) | ref|XP_011095757.1| | 7e-105 | PREDICTED: ALA-interacting subunit 1-like [Sesamum indicum] |
| JMFF005M24 | Sequence | 130 | 000573 (73) | 529 | 001250 (6) | ref|XP_008383203.1| | 5e-80 | PREDICTED: ALA-interacting subunit 3-like [Malus domestica] | |||
| JMFF012P19 | Sequence | 495 | 010184 (4) | ref|XP_008378453.1| | 3e-14 | PREDICTED: synaptotagmin-5 [Malus domestica] | 745 | 001250 (6) | ref|XP_008383203.1| | 7e-111 | PREDICTED: ALA-interacting subunit 3-like [Malus domestica] |
| JMFF019B22 | Sequence | 529 | 010184 (4) | ref|XP_007211498.1| | 2e-32 | hypothetical protein PRUPE_ppa007864mg [Prunus persica] gb|EMJ12697.1| hypotheti | 686 | 001250 (6) | ref|XP_008383203.1| | 2e-94 | PREDICTED: ALA-interacting subunit 3-like [Malus domestica] |
| JMFF020B14 | Sequence | 629 | 010184 (4) | ref|XP_010260740.1| | 1e-50 | PREDICTED: ALA-interacting subunit 3 [Nelumbo nucifera] | 444 | 001250 (6) | ref|XP_008383203.1| | 6e-83 | PREDICTED: ALA-interacting subunit 3-like [Malus domestica] |
| JMFF051E16 | Sequence | 616 | 010184 (4) | ref|XP_010260740.1| | 7e-44 | PREDICTED: ALA-interacting subunit 3 [Nelumbo nucifera] | 525 | 001250 (6) | ref|XP_009340121.1| | 3e-59 | PREDICTED: ALA-interacting subunit 3-like [Pyrus x bretschneideri] |
This contig is upended
. : . : . : . : . : . :
rJMFF020B14+ GCCTGAAGAT
rJMFF012P19+ GCCTGAAGAT
____________________________________________________________
consensus GCCTGAAGAT
. : . : . : . : . : . :
rJMFF019B22+ TTTGTTTAATGA
rJMFF005A05+ TTTGTTTAATGA
rJMFF020B14+ AAAGTCAATGGGACTGTCATAGTT-CCCTGTGGCCTTATAGCCTGGAGTTTGTTTAATGA
rJMFF012P19+ AAAGTCAATGGGACTGTCATAGTTCCCCTGTGGCCTTATAGCCTGGAGTTTGTTTAATGA
____________________________________________________________
consensus AAAGTCAATGGGACTGTCATAGTTCCCCTGTGGCCTTATAGCCTGGAGTTTGTTTAATGA
. : . : . : . : . : . :
rJMFF019B22+ TACNTACAGCTTTCCCCGCACCAATGTACAGCTGNCTGTAAACCAAANTAGAATATCATG
rJMFF005A05+ TACCTACAGCTTTACCCGCAACAATGTACAGCTGACTGTAAACCAAACTAGAATATCATG
rJMFF020B14+ TACCTACAGCTTTACCCGCAACAATGTACAGCTGACTGTAAACCAAACTAGAATATCATG
rJMFF012P19+ TACCTACAGCTTTACCCGCAACAATGTACAGCTGACTGTAAACCAAACTAGAATATCATG
____________________________________________________________
consensus TACCTACAGCTTTACCCGCAACAATGTACAGCTGACTGTAAACCAAACTAGAATATCATG
. : . : . : . : . : . :
rJMFF019B22+ GAAGAGTGACAGGGATCACAAGTTTGGCAAAGACGTCTATCCAAAGAACTTTCAGAATGG
rJMFF005M24+ GTCTATCCAAAGAACTTTCAGAATGG
rJMFF005A05+ GAAGAGTGACAGGGATCACAAGTTTGGCAAAGACGTCTATCCAAAGAACTTTCAGAATGG
rJMFF020B14+ GAAGAGTGACAGGGATCACAAGTTTGGCAAAGACGTCTATCCAAAGAACTTTCAGAATGG
rJMFF012P19+ GAAGAGTGACAGGGATCACAAGTTTGGCAAAGACGTCTATCCAAAGAACTTTCAGAATGG
____________________________________________________________
consensus GAAGAGTGACAGGGATCACAAGTTTGGCAAAGACGTCTATCCAAAGAACTTTCAGAATGG
. : . : . : . : . : . :
rJMFF019B22+ GTCTCTGATTGGGGGTAAGAAGCTTGACCCAGAGAAGCCGTTGAGTGAGCAGGAGGACCT
rJMFF005M24+ GTCTCTGATTGGGGGTAAGAAGCTTGNCCCAGAGAAGCCGTTGAGTGAGCAGGAGGACCT
rJMFF005A05+ GTCTCTGATTGGGGGTAAGAAGCTTGACCCAGAGAAGCCGTTGAGTGAGCAAGAGGACCT
rJMFF020B14+ GTCTCTGATTGGGGGTAAGAAGCTTGACCCAGAGAAGCCGTTGAGTGAGCAGGAGGACCT
rJMFF012P19+ GTCTCTGATTGGGGGTAAGAAGCTTGACCCAGAGAAGCCGTTGAGTGAGCAGGAGGACCT
____________________________________________________________
consensus GTCTCTGATTGGGGGTAAGAAGCTTGACCCAGAGAAGCCGTTGAGTGAGCAGGAGGACCT
. : . : . : . : . : . :
rJMFF019B22+ TATTGTTTGGATGCGANCTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
rJMFF005M24+ TATTGTTTGGATGCGAACTGNTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
rJMFF005A05+ TATTGTTTGGATGCGAACTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
rJMFF020B14+ TATTGTTTGGATGCGAACTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
rJMFF012P19+ TATTGTTTGGATGCGAACTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
rJMFF051E16+ AACTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
____________________________________________________________
consensus TATTGTTTGGATGCGAACTGCTGCTCTTCCAACGTTTAGGAAGTTATATGGGAAGATAGA
. : . : . : . : . : . :
rJMFF019B22+ GGTGGATCTTAATGCGAATGATGTCATTGATGTCNCGGTCGAGAATAATTACAATACCTA
rJMFF005M24+ GGTGGATCTTAATGCGAATGATGTCATTGATGTCACGGTCGAGAATAATTACAATACCTA
rJMFF005A05+ GGTGGATCTTAATGCGAATGATGTCATTGATGTCACGGTCGAGAATAATTACAATACCTA
rJMFF020B14+ GGTGGATCTTAATGCGAATGATGTCATTGATGTCACGGTCGAGAATAATTACAATACCTA
rJMFF012P19+ GGTGGATCTTAATGCGAATGATGTCATTGTTGTCACGGTCGAGAATAATTACAATACCTA
rJMFF051E16+ GGTGGATCTTAATGCGAATGATGTCATTGATGTCACGGTCGAGAATAATTACAATACCTA
____________________________________________________________
consensus GGTGGATCTTAATGCGAATGATGTCATTGATGTCACGGTCGAGAATAATTACAATACCTA
. : . : . : . : . : . :
rJMFF019B22+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTCNCTGGGTGGAAAAAA
rJMFF005M24+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
rJMFF005A05+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
rJMFF020B14+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
rJMFF012P19+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
rJMFF051E16+ CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
____________________________________________________________
consensus CAGTTTCAATGGCAAGAAGAAACTTGTGCTTTCTACCACTAGCTGGCTGGGTGGAAAAAA
. : . : . : . : . : . :
rJMFF019B22+ TGATTTCNTGGNTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
rJMFF005M24+ TGATTTCCTGGGTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
rJMFF005A05+ TGATTTCCTGGGTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
rJMFF020B14+ TGATTTCCTGGGTAT
rJMFF012P19+ TGATTTCCTGGGTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
rJMFF051E16+ TGATTTCCTGGGTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
____________________________________________________________
consensus TGATTTCCTGGGTATTGCATACCTTACTGTTGGTGGCTTGTGCTTCTTTTTGGCTATGGT
. : . : . : . : . : . :
rJMFF019B22+ TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
rJMFF005M24+ TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
rJMFF005A05+ TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
rJMFF012P19+ TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
rJMFF051E16+ TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
____________________________________________________________
consensus TTTCACTTTGATATATCTAGTTAAGCCAAGGCAACTTGGTGATCCATCTTATTTGTCATG
. : . : . : . : . : . :
rJMFF019B22+ GANCCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
rJMFF005M24+ GAACCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
rJMFF005A05+ GAACCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
rJMFF012P19+ GAACCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
rJMFF051E16+ GAACCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
____________________________________________________________
consensus GAACCGGAATCCAGGCGGTCACTAGCAGGCTCATAAGGTGTGCATTGCCTTGAGCTATCT
. : . : . : . : . : . :
rJMFF019B22+ GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
rJMFF005M24+ GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
rJMFF005A05+ GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
rJMFF012P19+ GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
rJMFF051E16+ GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
____________________________________________________________
consensus GTGATTGATTAAAGAGATGGAAGCTTGTCTTGATATTTTGGAACCAGCTATGTACAAAGT
. : . : . : . : . : . :
rJMFF019B22+ GGTTTAAATGTTAAAGAGATTGAATTTGTTATGTGAACTTAATGCCAGGCATTACAATTA
rJMFF005M24+ GGTTTAAATGTTAA
rJMFF005A05+ GGTTTAAATGTTAAAGAGATTGAATTTGTTATGTGAACTTAATGCCAGGCATTACAATTA
rJMFF012P19+ GGTTTAAATGTTAAAGAGATTGAATTTGTTATGTGAACTTAATGCCAGGCATTACAATTA
rJMFF051E16+ GGTTTAAATGTTAAAGAGATTGAATTTGTTATGTGAACTTAATGCCAGGCATTACAATTA
____________________________________________________________
consensus GGTTTAAATGTTAAAGAGATTGAATTTGTTATGTGAACTTAATGCCAGGCATTACAATTA
. : . : . : . : . : . :
rJMFF019B22+ ACTAT
rJMFF005A05+ ACTAT
rJMFF012P19+ ACTAT
rJMFF051E16+ ACTATTAAGGAGGCATATTATGTTTAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus ACTATTAAGGAGGCATATTATGTTTAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT