Contig 001246:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028I09Sequence589004679 (2)emb|CDO97885.1|2e-53unnamed protein product [Coffea canephora]722001246 (3)ref|XP_009603038.1|2e-81PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvat
JMFF051A07Sequence592004679 (2)emb|CDO97885.1|3e-54unnamed protein product [Coffea canephora]592001246 (3)ref|XP_009603038.1|4e-40PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvat
JMFN019E22Sequence685001246 (3)ref|XP_009603038.1|2e-80PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvat

Alignment

This contig is upended


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JMFN019E22-                                   GCAGACGGACAACGGCCTCTATGTACCTGTTGTCAG
rJMFF028I09+                     TCAACGTTGCTGTGCAGACGGACAACGGCNTCTATGTACCTGTTGTCAG
                      ____________________________________________________________
consensus                        TCAACGTTGCTGTGCAGACGGACAACGGCCTCTATGTACCTGTTGTCAG
 
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JMFN019E22-           GGATGCTGATAAGAAGGGTTTGTCCACTATTGCAGAAGAAGTGAAGTATTTAGCACAAAA
rJMFF028I09+          GGATGCTGATAAGAAGGGTTTGTCCACTATTGCAGAAGAAGTGAAGTATTTAGCACAAAA
                      ____________________________________________________________
consensus             GGATGCTGATAAGAAGGGTTTGTCCACTATTGCAGAAGAAGTGAAGTATTTAGCACAAAA
 
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JMFN019E22-           AGCAAAAGAAAATAGCTTAAAGCCATCTGATTATGAGGGAGGCACATTCACAGTGTCAAA
rJMFF028I09+          AGCAAAAGAAAATAGCTTAAAGCCATCTGATTATGAGGGAGGCACATTCACAGTGTCAAA
                      ____________________________________________________________
consensus             AGCAAAAGAAAATAGCTTAAAGCCATCTGATTATGAGGGAGGCACATTCACAGTGTCAAA
 
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JMFN019E22-           TTTAGGAGGGCCATTTGGTGTTAAACAATTTTGTGCAATTGTTAATCCTCCTCAGGCGGC
rJMFF028I09+          TTTAGGAGGGCCATTTGGTGTTAAACAATTTTGTGCAATTGTTAATCCTCCTCAGGCGGC
rJMFF051A07+                  GGCCATTTGGTGTTAAACAATTTTGTGCAATTGTTAATCCTCCTCAGGCGGC
                      ____________________________________________________________
consensus             TTTAGGAGGGCCATTTGGTGTTAAACAATTTTGTGCAATTGTTAATCCTCCTCAGGCGGC
 
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JMFN019E22-           CATTCTGGCAATCGGATCTGCTGAGAGAAGGGTTGTACCTGGTTCTGGTGCTGACCAGTA
rJMFF028I09+          CATTCTGGCAATCGGATCTGCTGAGAGAAGGGTTGTACCTGGTTCTGGTGCTGACCAGTA
rJMFF051A07+          CATTCTGGCAATCGGATCTGCTGAGAGAAGGGTTGTACCTGGTTCTGGTGCTGACCAGTA
                      ____________________________________________________________
consensus             CATTCTGGCAATCGGATCTGCTGAGAGAAGGGTTGTACCTGGTTCTGGTGCTGACCAGTA
 
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JMFN019E22-           TAAGTTTGCCTCTTTGATGTCTGCGACATTGAGTTGTGATCACCGGGTTATTGATGGTGC
rJMFF028I09+          TAAGTTTGCCTCTTTGATGTCTGCGACATTGAGTTGTGATCACCGGGTTATTGATGGTGC
rJMFF051A07+          TAAGTTTGCCTCTTTGATGTCTGCGACATTGAGTTGTGATCACCGGGTTATTGATGGTGC
                      ____________________________________________________________
consensus             TAAGTTTGCCTCTTTGATGTCTGCGACATTGAGTTGTGATCACCGGGTTATTGATGGTGC
 
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JMFN019E22-           AATTGGTGCAGAATGGCTTAAAGCATTTAAAGGCTACATTGAGAATCCCGAATCTATGTT
rJMFF028I09+          AATTGGTGCAGAATGGCTTAAAGCATTTAAAGGCTACATTGAGAATCCCAAATCTATGTT
rJMFF051A07+          AATTGGTGCAGAATGGCTTAAAGCATTTAAAGGCTACATTGAGAATCCCAAATCTATGTT
                      ____________________________________________________________
consensus             AATTGGTGCAGAATGGCTTAAAGCATTTAAAGGCTACATTGAGAATCCCAAATCTATGTT
 
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JMFN019E22-           GCTGTAGATTGATATTTACTGTTTCTGCTCATTTCTGTTTTTGGCCTTTGCATGATCAAG
rJMFF028I09+          GCTGTAGATTGATATTTACTGTTTCTGCTCATTTCTGTTTTTGGCCTTTGCATGATCAAG
rJMFF051A07+          GCTGTAGATTGATATTTACTGTTTCTGCTCATTTCTGTTTTTGGCCTTTGCATGATCAAG
                      ____________________________________________________________
consensus             GCTGTAGATTGATATTTACTGTTTCTGCTCATTTCTGTTTTTGGCCTTTGCATGATCAAG
 
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JMFN019E22-           CTAAAAAGCAAATTATCAGCAACGGCAAGTTGATGATTTCATTTGTTGGCTTGATTTTGT
rJMFF028I09+          CTAAAAAGCAAATTATCAGCAACGGCAAGTTGATGATTTCATTTGTTGGCTTGATTTTGT
rJMFF051A07+          CTAAAAAGCAAATTATCAGCAACGGCAAGTTGATGATTTCATTTGTTGGCTTGATTTTGT
                      ____________________________________________________________
consensus             CTAAAAAGCAAATTATCAGCAACGGCAAGTTGATGATTTCATTTGTTGGCTTGATTTTGT
 
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JMFN019E22-           AGCTTTTATAGAGCCCCCTCACCAAGAAAATGGCTGAATTGATGATGTCAAATAACGGGG
rJMFF028I09+          AGCTTTTATAGAGCCCCCTCACCAAGAAAATGGCTGAATTGATGATGTCAAATAACGGGG
rJMFF051A07+          AGCTTTTATAGAGCCCCCTCACCAAGAAAATGGCTGAATTGATGATGTCAAATAACGGGG
                      ____________________________________________________________
consensus             AGCTTTTATAGAGCCCCCTCACCAAGAAAATGGCTGAATTGATGATGTCAAATAACGGGG
 
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JMFN019E22-           TCTGAGGATGGAAACCCCACATGCTTTTGGATTNTGTAGGATGTAGGGACATTNTTTTGT
rJMFF028I09+          TCTGAGGATGGAAACCCCACATGCTTTTGGATTTTGTAGGATGTAGGGACATTTTTTTGT
rJMFF051A07+          TCTGAGGATGGAAACCCCACATGCTTTTGGATTTTGTAGGATGTAGGGACATTTTTTTGT
                      ____________________________________________________________
consensus             TCTGAGGATGGAAACCCCACATGCTTTTGGATTTTGTAGGATGTAGGGACATTTTTTTGT
 
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JMFN019E22-           GACCTAGAATTGAGTTACCAATTGTCGTTTTATACTGGATGTACC               
rJMFF028I09+          GACCTAGAATTGAGTTACCAATTGTCGTTTTATACTGGATGTACCTCATTGGGAAGACTA
rJMFF051A07+          GACCTAGAATTGAGTTACCAATTGTCGTTTTATACTGGATGTACCTCATTGGGAAGACTA
                      ____________________________________________________________
consensus             GACCTAGAATTGAGTTACCAATTGTCGTTTTATACTGGATGTACCTCATTGGGAAGACTA
 
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rJMFF028I09+          TATATTT                                                     
rJMFF051A07+          TATATTTTCATCATGCAATAAGAGAAGCAGTTCTACAAAAAAAAAAAAAAAACTCTCCAG
                      ____________________________________________________________
consensus             TATATTTTCATCATGCAATAAGAGAAGCAGTTCTACAAAAAAAAAAAAAAAACTCTCCAG