clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007A02 | Sequence | 533 | 001245 (24) | ref|XP_009768928.1| | 8e-67 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 654 | 001245 (24) | emb|CDO96950.1| | 5e-58 | unnamed protein product [Coffea canephora] |
JMFF013B21 | Sequence | 567 | 001245 (24) | ref|XP_009768928.1| | 5e-77 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 760 | 001245 (24) | ref|XP_009768928.1| | 1e-104 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMFF022N18 | Sequence | 437 | 001245 (24) | ref|XP_004230885.1| | 6e-41 | PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum] | 682 | 001245 (24) | ref|XP_009768928.1| | 5e-78 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMFF027H14 | Sequence | 504 | 001245 (24) | ref|XP_004230885.1| | 2e-37 | PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum] | 746 | 001245 (24) | ref|XP_009768928.1| | 2e-101 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMFF050N16 | Sequence | 642 | 001245 (24) | ref|XP_009590743.1| | 9e-72 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana tomentosifo | 568 | 001245 (24) | emb|CDO96950.1| | 2e-53 | unnamed protein product [Coffea canephora] |
JMSF004D06 | Sequence | 333 | 001245 (24) | ref|XP_009768928.1| | 7e-21 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 509 | 001245 (24) | ref|XP_009768928.1| | 2e-64 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMSF004D08 | Sequence | 287 | 003847 (4) | ref|NP_001265951.1| | 8e-15 | Hop-interacting protein THI033 [Solanum lycopersicum] gb|AEW69796.1| Hop-interac | 215 | 001245 (24) | emb|CDO96950.1| | 2e-33 | unnamed protein product [Coffea canephora] |
JMSF018I24 | Sequence | 400 | 001245 (24) | ref|XP_009768928.1| | 6e-04 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 749 | 001245 (24) | ref|XP_009768928.1| | 1e-113 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMSF018M04 | Sequence | 512 | 001245 (24) | ref|XP_009768928.1| | 6e-61 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 659 | 009152 (24) | ref|XP_009624885.1| | 3e-117 | PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis] |
JMSF041A16 | Sequence | 729 | 001245 (24) | ref|XP_009768928.1| | 1e-90 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 629 | 001245 (24) | ref|XP_009768928.1| | 2e-70 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMSF044H11 | Sequence | 822 | 001245 (24) | ref|XP_009768928.1| | 3e-125 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] | 787 | 001245 (24) | ref|XP_009768928.1| | 4e-120 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMSF052H11 | Sequence | 642 | 001245 (24) | ref|XP_004230885.1| | 2e-69 | PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum] | 966 | 001245 (24) | ref|XP_009788094.1| | 1e-147 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
JMSF052H12 | Sequence | 640 | 001245 (24) | ref|XP_004230885.1| | 6e-69 | PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum] | 923 | 001245 (24) | ref|XP_009788094.1| | 3e-139 | PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF027H14- AATCAGTG
JMFF050N16- AGTG
JMSF041A16- AGTG
____________________________________________________________
consensus AATCAGTG
. : . : . : . : . : . :
JMFF027H14- GTAGGTAAGCTATTGCCTATTGGCATTTGGTTGTTGTAGTTGAAGCGGATAGAAAAAGGT
JMFF050N16- GTAGGTAAGCTATTGCCTATTGGCATTTGGTTGTTGTAGTTGAAGCGGATAGAAAAAGGT
JMSF041A16- GTAGGTAAGCTATTGCCTATTGGCATTTGGTTGTTGTAGTTGAAGCGGATAGAAAAAGGT
JMSF044H11- TGGCATTTGGTTGTTGTAGTTGAAGCGGATAGAAAAAGGT
____________________________________________________________
consensus GTAGGTAAGCTATTGCCTATTGGCATTTGGTTGTTGTAGTTGAAGCGGATAGAAAAAGGT
. : . : . : . : . : . :
JMFF027H14- GTCGCCCACCCACTGAGTAGTAGCGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMFF050N16- GTCGCCCACCCACTGAGTAGTAGCGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMFF013B21- GTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMFF007A02- GTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF018M04- GTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMFF022N18- GTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF004D06- GTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF018I24- CGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF041A16- GTCGCCCACCCACTGAGTAGTAGCGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF052H12- TCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF052H11- TCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
JMSF044H11- GTCGCCCACCCACTGAGTAGTAGCGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
____________________________________________________________
consensus GTCGCCCACCCACTGAGTAGTAGCGTCTTCATCAGTCTTCTCCATTTCAATTTTCAGAGT
. : . : . : . : . : . :
JMFF027H14- TCAAACGCTTTGCGGCAATGGCGGTGTAGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMFF050N16- TCAAACGCTTTGCGGCAATGGCGGTGTAGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMFF013B21- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMFF007A02- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF018M04- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMFF022N18- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF004D06- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF018I24- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF041A16- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF052H12- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF052H11- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
JMSF044H11- TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
____________________________________________________________
consensus TCAAACGCTTTGCGGCAATGGCGGTGTCGTCAGCATCTCTGGCTTCTCAACTCTCCGGTC
. : . : . : . : . : . :
JMFF027H14- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMFF050N16- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMFF013B21- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMFF007A02- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF018M04- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMFF022N18- CCGCCTCCACTCCTAACTTCGTCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF004D06- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF018I24- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF041A16- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF052H12- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF052H11- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
JMSF044H11- CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
____________________________________________________________
consensus CCGCCTCCACTCCTAACTTC-TCCGCCCTCCGTCGATCTATCCCCACCTCCCTCACTCTC
. : . : . : . : . : . :
JMFF027H14- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMFF050N16- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMFF013B21- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMFF007A02- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF018M04- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMFF022N18- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF004D06- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF018I24- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF041A16- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF052H12- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF052H11- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
JMSF044H11- TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
____________________________________________________________
consensus TCTACCACTCAATCCTTCTTCCAAACCGTCGACTCTCGCCTCCGCGTATCCTCTTCTGGC
. : . : . : . : . : . :
JMFF027H14- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMFF050N16- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMFF013B21- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMFF007A02- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMSF018M04- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMFF022N18- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMSF004D06- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMSF018I24- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAG
JMSF041A16- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
JMSF052H12- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTCTTTGTTGGTGGAAAC
JMSF052H11- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTCTTTGTTGGTGGAAAC
JMSF044H11- AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
____________________________________________________________
consensus AAAGGCTGCCGAGCCGTCGTCGCCATGGCCGGCTCCGGAAAGTTTTTTGTTGGTGGAAAC
. : . : . : . : . : . :
JMFF027H14- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMFF050N16- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMFF013B21- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMFF007A02- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMSF018M04- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMFF022N18- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMSF004D06- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGT
JMSF041A16- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
JMSF052H12- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTC-
JMSF052H11- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTC-
JMSF044H11- TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
rJMSF052H12+ CAGTTC-
rJMSF052H11+ AAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGANCAGTTC-
____________________________________________________________
consensus TGGAAATGTAATGGAACAAAAGAGTCTATAGCCAAGCTAGTCTCTGAATTGAACAGTTCA
. : . : . : . : . : . :
JMFF027H14- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMFF050N16- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMFF013B21- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMFF007A02- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMSF018M04- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMFF022N18- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMSF041A16- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMSF052H12- AGGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMSF052H11- AGGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
JMSF044H11- AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
rJMSF052H12+ AGGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCCTTTTTCTGTATATTGATCAAGT
rJMSF052H11+ AGGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
____________________________________________________________
consensus AAGCTGGAGCCTGATGTTGATGTGGTGGTGGCACCTCC-TTTTCTGTATATTGATCAAGT
. : . : . : . : . : . :
JMFF027H14- AAAGAACAATTTAACTAA
JMFF050N16- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMFF013B21- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMFF007A02- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMSF018M04- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMFF022N18- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAA
JMSF041A16- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMSF052H12- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMSF052H11- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
JMSF044H11- AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
rJMSF052H12+ AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
rJMSF044H11+ G
rJMSF052H11+ AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
____________________________________________________________
consensus AAAGAACAATTTAACTAATCGGGTTGAGATTTCTGCTCAGAATTGTTGGATTGGAAAGGG
. : . : . : . : . : . :
JMFF050N16- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMFF013B21- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMFF007A02- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMSF018M04- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAG
JMSF041A16- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMSF052H12- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMSF052H11- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
JMSF044H11- TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGTTGCAAGTGGGT
rJMSF052H12+ TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
rJMSF044H11+ TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGTTGCAAGTGGGT
rJMSF018I24+ GGAGCAGTTAAATGATATTGGATGCAAGTGGGT
rJMSF052H11+ TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
____________________________________________________________
consensus TGGAGCTTTTACTGGAGAAATCAGTGTGGAGCAGTTAAATGATATTGGATGCAAGTGGGT
. : . : . : . : . : . :
JMFF050N16- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGG
JMFF013B21- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTA
JMFF007A02- CATTCTTGGTCATTCTGA
JMSF041A16- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
JMSF052H12- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
JMSF052H11- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
JMSF044H11- CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMSF052H12+ CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMSF044H11+ CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMSF018I24+ CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMSF052H11+ CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMFF013B21+ CTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
rJMFF027H14+ TGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
____________________________________________________________
consensus CATTCTTGGTCATTCTGAGAGGAGACATATAATTGGAGAAAATGATGAATTTATAGGAAA
. : . : . : . : . : . :
JMSF041A16- GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATCGGGG
JMSF052H12- GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
JMSF052H11- GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
JMSF044H11- GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMSF052H12+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMSF044H11+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMSF018I24+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTCGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMSF052H11+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMFF013B21+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMFF022N18+ TGAGCCAAGGTGNTGGAGTTATAGCNTGCATCGGGGGAACTTT
rJMFF027H14+ GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
rJMFF007A02+ TTT
____________________________________________________________
consensus GAAGGCTGCTTATGCCTTGAGCCAAGGTGTTGGAGTTATAGCCTGCATC-GGGGAACTTT
. : . : . : . : . : . :
JMSF052H12- TACAAGA
JMSF052H11- TACAAGAAA
JMSF044H11- TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMSF052H12+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMSF044H11+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMSF004D06+ ACAATTAAAGGCTTTTG
rJMSF018I24+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMSF052H11+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMFF013B21+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMFF022N18+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMSF041A16+ AAAACCTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMFF027H14+ TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
rJMFF007A02+ TACAAGAAAGAGAGGCAGGAAAANCTTTCGATGTCTGTTTCCAACAATTAAAGGCTNTTG
____________________________________________________________
consensus TACAAGAAAGAGAGGCAGGAAAAACTTTCGATGTCTGTTTCCAACAATTAAAGGCTTTTG
. : . : . : . : . : . :
JMSF044H11- CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGANCCTGTATGGGCTATC
rJMSF052H12+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMSF044H11+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMSF004D06+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMSF018I24+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMSF052H11+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMFF013B21+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMFF022N18+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMSF041A16+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMFF027H14+ CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMFF007A02+ CAGATGCTTTACCCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
rJMFF050N16+ TCATTGCATATGAGCCTGTATGGGCTATC
____________________________________________________________
consensus CAGATGCTTTA-CCAAGTTGGGATAATGTTGTCATTGCATATGAGCCTGTATGGGCTATC
. : . : . : . : . : . :
JMSF044H11- GGAACT
rJMSF052H12+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF044H11+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF004D06+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF018I24+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF052H11+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMFF013B21+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMFF022N18+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF041A16+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMFF027H14+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMFF007A02+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMSF004D08+ TGGCAAAGTGGCCACACTTGAGCAGNCTCAAGAAGTGCATGCAGCTATTCGTGAT
rJMFF050N16+ GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
____________________________________________________________
consensus GGAACTGGCAAAGTGGCCACACCTGAGCAGGCTCAAGAAGTGCATGCAGCTATTCGTGAT
. : . : . : . : . : . :
rJMSF052H12+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF044H11+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF004D06+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF018I24+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF052H11+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMFF013B21+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMFF022N18+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF041A16+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMFF027H14+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMFF007A02+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
rJMSF004D08+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATCATCTATGGAGGT
rJMFF050N16+ TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
____________________________________________________________
consensus TGGCTTAGTAAGAATGTCTCATCAGATGTTGCTTCAAAAACACGTATTATCTATGGAGGT
. : . : . : . : . : . :
rJMSF052H12+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF044H11+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF004D06+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF018I24+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF052H11+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMFF013B21+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMFF022N18+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF041A16+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMFF027H14+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMFF007A02+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
rJMSF004D08+ TCTGNGAATGGANGCAANTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTNTA
rJMFF050N16+ TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
____________________________________________________________
consensus TCTGTGAATGGAAGCAACTGCGCCGAACTTGCAAAGAAAGAAGACATTGATGGATTTCTA
. : . : . : . : . : . :
rJMSF052H12+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF044H11+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF004D06+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF018I24+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF052H11+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMFF013B21+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMFF022N18+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF041A16+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMFF027H14+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMFF007A02+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
rJMSF004D08+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCNTCCA
rJMFF050N16+ GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
____________________________________________________________
consensus GTGGGAGGTGCTTCCCTAAAGGGTCCTGAATTTGCCTCCATTGTTAACTCTGTCACTTCC
. : . : . : . : . : . :
rJMSF052H12+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMSF044H11+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMSF004D06+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMSF018I24+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMSF052H11+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMFF013B21+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMFF022N18+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMSF041A16+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMFF027H14+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMFF007A02+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
rJMFF050N16+ AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
____________________________________________________________
consensus AAAAAGGTTACTGCCTGATTATAGTTTAGTCCCTCCGTTTGATGGTCATACCATGCATGC
. : . : . : . : . : . :
rJMSF052H12+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMSF044H11+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMSF004D06+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMSF018I24+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMSF052H11+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMFF013B21+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMFF022N18+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMSF041A16+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMFF027H14+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMFF007A02+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
rJMFF050N16+ TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
____________________________________________________________
consensus TAAATAAATGAGTGGGAGAAATTCCTGTAGCATATGCATCGTGCTATATATGTTGATGTG
. : . : . : . : . : . :
rJMSF052H12+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMSF044H11+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMSF004D06+ GTGGGTGAAATTTTTGATAGAATATNTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMSF018I24+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMSF052H11+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMFF013B21+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMFF022N18+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMSF041A16+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMFF027H14+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMFF007A02+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
rJMFF050N16+ GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
____________________________________________________________
consensus GTGGGTGAAATTTTTGATAGAATATTTGCTGTCATCACAATGTAAGTCGAAGAAGTCGTT
. : . : . : . : . : . :
rJMSF052H12+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTGTT
rJMSF044H11+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
rJMSF004D06+ ACT
rJMSF018I24+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG
rJMSF052H11+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
rJMFF013B21+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTGTT
rJMFF022N18+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTGTT
rJMSF041A16+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
rJMFF027H14+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
rJMFF007A02+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
rJMFF050N16+ ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
____________________________________________________________
consensus ACTTGAAAGAACGTTTTCGTCCACCTGTCATATAATGCTTTGATGTTATGCCTTTCTG-T
. : . : . : . : . : . :
rJMSF052H12+ TAG
rJMSF044H11+ TTAGTGATG
rJMSF052H11+ TTAGTGATGTGATA
rJMFF013B21+ TTAGTGATGTGATACATCGACAAGGAATAAT
rJMFF022N18+ TTAGTGATGTGAGACATCGACAAGGAATAATAATCGTCAA
rJMSF041A16+ TTAGTGATGTGATAC
rJMFF027H14+ TTAGTGATGTGATACATCGACAAGGAATAATAATCGTCAA
rJMFF007A02+ TTAGTGATGTGATACATCGACAAGGAATAATAATCGTCAA
rJMFF050N16+ TTAGTGATGTGATACATCGACAAGGAATAATAATCGTCAACGGAGTTTTGATCTCTTAAT
____________________________________________________________
consensus TTAGTGATGTGATACATCGACAAGGAATAATAATCGTCAACGGAGTTTTGATCTCTTAAT