| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023K04 | Sequence | 450 | 001239 (29) | ref|XP_011071315.1| | 3e-42 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] | |||||
| JMFF050D10 | Sequence | 583 | 001239 (29) | ref|XP_006358383.1| | 6e-60 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 450 | 001239 (29) | ref|XP_011071315.1| | 1e-37 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF002N02 | Sequence | 356 | 001239 (29) | ref|XP_006358383.1| | 2e-15 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 749 | 001239 (29) | ref|XP_011071315.1| | 2e-114 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF004A22 | Sequence | 351 | 009311 (3) | ref|XP_009604383.1| | 3e-64 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo | 149 | 001239 (29) | |||
| JMSF004C24 | Sequence | 390 | 001239 (29) | ref|XP_006358383.1| | 1e-27 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | |||||
| JMSF010K05 | Sequence | 405 | 001239 (29) | ref|XP_006358383.1| | 1e-27 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 785 | 001239 (29) | ref|XP_011071315.1| | 9e-122 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF011J16 | Sequence | 330 | 001239 (29) | 770 | 001239 (29) | ref|XP_011071315.1| | 2e-120 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] | |||
| JMSF018O03 | Sequence | 425 | 001239 (29) | ref|XP_006358383.1| | 2e-27 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 746 | 001239 (29) | ref|XP_011071315.1| | 5e-116 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF024F19 | Sequence | 649 | 001239 (29) | ref|XP_006358383.1| | 1e-65 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 620 | 001239 (29) | ref|XP_011071315.1| | 7e-60 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF033G22 | Sequence | 712 | 001239 (29) | ref|XP_006358383.1| | 1e-88 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 747 | 001239 (29) | ref|XP_011071315.1| | 5e-116 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF040N01 | Sequence | 670 | 001239 (29) | ref|XP_006358383.1| | 2e-64 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 940 | 001239 (29) | ref|XP_011071315.1| | 1e-160 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF042I22 | Sequence | 762 | 001239 (29) | ref|XP_006358383.1| | 1e-109 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 738 | 001239 (29) | ref|XP_011071315.1| | 4e-104 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF044I02 | Sequence | 642 | 001239 (29) | ref|XP_006358383.1| | 3e-75 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 874 | 001239 (29) | ref|XP_011071315.1| | 3e-144 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF045C06 | Sequence | 776 | 001239 (29) | ref|XP_004244596.1| | 4e-80 | PREDICTED: PGR5-like protein 1B, chloroplastic [Solanum lycopersicum] | 758 | 001239 (29) | ref|XP_011071315.1| | 2e-96 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF046M17 | Sequence | 725 | 001239 (29) | ref|XP_004245668.1| | 9e-78 | PREDICTED: PGR5-like protein 1A, chloroplastic [Solanum lycopersicum] | 609 | 001239 (29) | ref|XP_011071315.1| | 6e-60 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
| JMSF052O24 | Sequence | 620 | 001239 (29) | ref|XP_006358383.1| | 2e-68 | PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum] | 804 | 001239 (29) | ref|XP_011071315.1| | 3e-131 | PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF011J16- GGTAACATCATAACGCCAAAG
____________________________________________________________
consensus GGTAACATCATAACGCCAAAG
. : . : . : . : . : . :
JMSF011J16- AAGATTTTCTCCGAATCGGGACAGAATTGAATCCAACTTCCCGCCACACATTCTTCACCT
JMSF040N01- GGGACAGAATTGAATCCAACTTCCCGCCACACATTCTTCACCT
JMSF024F19- GCCACACATTCTTCACCT
____________________________________________________________
consensus AAGATTTTCTCCGAATCGGGACAGAATTGAATCCAACTTCCCGCCACACATTCTTCACCT
. : . : . : . : . : . :
JMSF011J16- CCCTTATCTCTCTCCTCCACCAATACCCTCGAATCCCCGCGCTCAATTTCACCAATGCAC
JMFF050D10- AATTTCACCAATGCAC
JMSF018O03- GCGCTCAATTTCACCAATGCAC
JMSF040N01- CCCTTATCTCTCTCCTCCACCAATACCCTCGAATCCCCGCGCTCAATTTCACCAATGCAC
JMSF024F19- CCCTTATCTCTCTCCTCCACCAATACCCTCGAATCCCCGCGCTCAATTTCACCAATGCAC
JMSF046M17- GCTCAATTTCACCAATGCAC
JMSF052O24- CCAATGCAC
JMSF033G22- GCGCTCAATTTCACCAATGCAC
JMSF010K05- C
JMSF002N02- AATGCAC
JMSF045C06- AATGCAC
____________________________________________________________
consensus CCCTTATCTCTCTCCTCCACCAATACCCTCGAATCCCCGCGCTCAATTTCACCAATGCAC
. : . : . : . : . : . :
JMSF011J16- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMFF050D10- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF018O03- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF040N01- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF024F19- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF046M17- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF044I02- TCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF052O24- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF033G22- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF010K05- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF004C24- AGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF002N02- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF045C06- CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
JMSF042I22- GCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
____________________________________________________________
consensus CCTCATTTTGCAGACTTGCGCCACCGCTTCACTCCCACCACCATCCCCACAACCGCCGCC
. : . : . : . : . : . :
JMSF011J16- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMFF050D10- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF018O03- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF040N01- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF024F19- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF046M17- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF044I02- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF052O24- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF033G22- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF010K05- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF004C24- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF002N02- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF045C06- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
JMSF042I22- GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
____________________________________________________________
consensus GCCGCCGCCATAAATGGCCACCAAACTTGTCTTCACTATCACGACTCCCCGCTTTCTTCG
. : . : . : . : . : . :
JMSF011J16- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMFF050D10- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF018O03- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF040N01- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF024F19- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF046M17- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF044I02- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF052O24- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF033G22- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF010K05- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF004C24- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF002N02- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF045C06- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
JMSF042I22- CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCCTCTAATTCTAA
____________________________________________________________
consensus CGCCCCGCTGAGAAGACCATTCATTTCTGCATGTTCACCTACTTTGCCTTCTAATTCTAA
. : . : . : . : . : . :
JMSF011J16- GCTTCCGTT
JMFF050D10- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF018O03- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF040N01- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF024F19- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF046M17- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF044I02- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF052O24- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF033G22- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF010K05- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF004C24- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF002N02- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF045C06- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
JMSF042I22- GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
____________________________________________________________
consensus GCTTCCGTTGATTGATTTCGCCCGTGGGAAGTTCTTGCTTCGACGGAGGCTGCTGCTTCT
. : . : . : . : . : . :
JMFF050D10- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF018O03- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF040N01- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF024F19- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF046M17- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF044I02- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF052O24- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF033G22- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF010K05- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF004C24- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF002N02- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF045C06- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
JMSF042I22- ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
rJMSF040N01+ AAGTCAAAGAAGATGAAGTTGAAGACAG
____________________________________________________________
consensus ATCTCCCAAGGCCACCAGTGATCGGCCAGGTGAAGTCAAAGAAGATGAAGTTGAAGACAG
. : . : . : . : . : . :
JMFF050D10- TAAGATCTTGCAGTACTGCAGCATTGACAAGGAAGAGAAGAAGTCTTTCGGCGAGATGGA
JMSF018O03- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF040N01- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF024F19- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF046M17- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF044I02- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF052O24- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF033G22- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF010K05- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF004C24- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF002N02- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTT
JMSF045C06- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
JMSF042I22- TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
rJMSF044I02+ CGAGATGGA
rJMSF040N01+ TAAGATCTTGCAGTACTGCAGCATTGACANGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
____________________________________________________________
consensus TAAGATCTTGCAGTACTGCAGCATTGACAAGAAAGAGAAGAAGTCTTTGGGCGAGATGGA
. : . : . : . : . : . :
JMFF050D10- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF018O03- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGG
JMSF040N01- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF024F19- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF046M17- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF044I02- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF052O24- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF033G22- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
JMSF010K05- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAG
JMSF004C24- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAA
JMSF045C06- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGG--ACGCGATAATGTCAAA
JMSF042I22- ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
rJMSF044I02+ ACAAGACTTTNTTCAAGCATTACAAGCATTNTATTATGAAGGAAAGGCGATAATGTCNAA
rJMSF040N01+ ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
rJMSF052O24+ GATAATGTCAAA
____________________________________________________________
consensus ACAAGACTTTCTTCAAGCATTACAAGCATTCTATTATGAAGGAAAGGCGATAATGTCAAA
. : . : . : . : . : . :
JMFF050D10- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF040N01- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF024F19- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF046M17- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF044I02- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF052O24- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF033G22- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF045C06- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
JMSF042I22- TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
rJMSF044I02+ TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
rJMSF040N01+ TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
rJMSF018O03+ CAGTGTAGTCATGCT
rJMSF033G22+ CAGTGTAGTCATGCT
rJMSF042I22+ AAGGGAGCAGTGTAGTCATGCT
rJMSF045C06+ GTAGTCATGCT
rJMSF010K05+ CCTCAAGGAGGAATTGATGNGGNAAGGGAGCAGTGTAGTCATGCT
rJMSF052O24+ TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
rJMSF002N02+ GTAGTCATGNT
rJMSF011J16+ TGATGTGGGAAGGGAGCAGTGTAGTCATGCT
____________________________________________________________
consensus TGAGGAATTTGACAACCTCAAGGAGGAATTGATGTGGGAAGGGAGCAGTGTAGTCATGCT
. : . : . : . : . : . :
JMFF050D10- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAAATCCA
JMSF040N01- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF024F19- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF046M17- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF044I02- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF052O24- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF033G22- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF045C06- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
JMSF042I22- AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF044I02+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF040N01+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF018O03+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF033G22+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF042I22+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCCAATGGCTTATGTTTCTGGGAATCCAA
rJMSF045C06+ AAGTGCTGATGAACAGAGGTTTTGGAANGCTTCAATGGCTTATGGTTTCTGGGAATCCAA
rJMSF010K05+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF052O24+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF002N02+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
rJMSF011J16+ AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
____________________________________________________________
consensus AAGTGCTGATGAACAGAGGTTTTTGGAAGCTTCAATGGCTTAT-GTTTCTGGGAATCCAA
. : . : . : . : . : . :
JMFF050D10- -TTTTGTCTGACAA
JMSF040N01- -TTTTGTCTGACAAAGAATTTGACG
JMSF024F19- -TTTTGTCTGACAAAGAATTTGACGAGCTAAA
JMSF046M17- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
JMSF044I02- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
JMSF052O24- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
JMSF033G22- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
JMSF045C06- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
JMSF042I22- -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF044I02+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF040N01+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF018O03+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF033G22+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF042I22+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF045C06+ TTTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF010K05+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF052O24+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF002N02+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
rJMSF011J16+ -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
____________________________________________________________
consensus -TTTTGTCTGACAAAGAATTTGACGAGCTAAAATTGAAACTTAAGATGGATGGTAGTGAA
. : . : . : . : . : . :
JMSF046M17- ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTT
JMSF044I02- ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAG
JMSF052O24- ATTGTGGTTGA
JMSF033G22- ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
JMSF045C06- ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
JMSF042I22- ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF044I02+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF040N01+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF018O03+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF033G22+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF042I22+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF045C06+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF010K05+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF052O24+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF002N02+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
rJMSF011J16+ ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
____________________________________________________________
consensus ATTGTGGTTGAGGGTCCCCGGTGCAGTCTTCGCAGTAGGAAGGTTTACAGTGACCTCTCT
. : . : . : . : . : . :
JMSF033G22- GTTGACTATCTGAAGATGTTCTTGCTCA
JMSF045C06- GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
JMSF042I22- GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF044I02+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF040N01+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF018O03+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF033G22+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF042I22+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF045C06+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF010K05+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF052O24+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF002N02+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
rJMSF046M17+ A
rJMSF024F19+ A
rJMSF011J16+ GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
____________________________________________________________
consensus GTTGACTATCTGAAGATGTTCTTGCTCAATGTTCCTGGTGTTTTGGTAGCCCTGGGATTA
. : . : . : . : . : . :
JMSF045C06- TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGC
JMSF042I22- TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF044I02+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF040N01+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF018O03+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF033G22+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF042I22+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF045C06+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMFF023K04+ CACTTACCTGTTGGAGCTTCCGGAG
rJMSF010K05+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF052O24+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF002N02+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF046M17+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF024F19+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
rJMSF011J16+ TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
____________________________________________________________
consensus TTTTTCTTCATTGACGATTTGACTGGATTTGAAATCACTTACCTGTTGGAGCTTCCGGAG
. : . : . : . : . : . :
rJMSF044I02+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF040N01+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF018O03+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF033G22+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF042I22+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF045C06+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMFF023K04+ CCATTCAGCTTTATCTTCACATGGTTTGNTGNTTTGCCTTTCATCCTGNGNCTATCTTTT
rJMSF010K05+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF052O24+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF002N02+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF046M17+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF024F19+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMSF011J16+ CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
rJMFF050D10+ GCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
____________________________________________________________
consensus CCATTCAGCTTTATCTTCACATGGTTTGCTGCTTTGCCTTTCATCCTGTGGCTATCTTTT
. : . : . : . : . : . :
rJMSF044I02+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF040N01+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF018O03+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF033G22+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF042I22+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF045C06+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMFF023K04+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGN
rJMSF010K05+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF052O24+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF002N02+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF046M17+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF024F19+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMSF011J16+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
rJMFF050D10+ ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
____________________________________________________________
consensus ACAATCACGGGAATCATCGTGAAAGATGTCCTGATCGTGAAGGGCGCCTGTCCAAATTGT
. : . : . : . : . : . :
rJMSF044I02+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF040N01+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF018O03+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF033G22+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF042I22+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF045C06+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMFF023K04+ GGAACAGAAAACACTTCATTNTTNGGTACCATATTGTCAGTATCCAGCGGAGGTTCCGCC
rJMSF010K05+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF052O24+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF002N02+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF046M17+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF024F19+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMSF011J16+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
rJMFF050D10+ GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
____________________________________________________________
consensus GGAACAGAAAACACTTCATTCTTCGGTACCATATTGTCAGTATCCAGCGGAGGTTCCACC
. : . : . : . : . : . :
rJMSF044I02+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF040N01+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF018O03+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF033G22+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF042I22+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF045C06+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMFF023K04+ AACAACGTAAAATGCACAAATTNNGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF010K05+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF052O24+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF002N02+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF046M17+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF024F19+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMSF011J16+ AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
rJMFF050D10+ AACAACGTAAAATGCCCAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
____________________________________________________________
consensus AACAACGTAAAATGCACAAATTGTGAGACGCAGATGATATACGATTCAAAAACACGTCTG
. : . : . : . : . : . :
rJMSF044I02+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF040N01+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF004A22+ TTGCCTGAAGGAACCTAGATGGACATTNCACATTGGCAAAACGAATAAGGTAAT
rJMSF018O03+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF033G22+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF042I22+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF045C06+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMFF023K04+ ATCACCTTGCNTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF010K05+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF052O24+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF002N02+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF046M17+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF024F19+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMSF011J16+ ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
rJMFF050D10+ ATCACCTTGCCTGAAGGAACCTAGATGGGCATTGCACATTGGCAAAATGAATAAGGTAAT
____________________________________________________________
consensus ATCACCTTGCCTGAAGGAACCTAGATGGACATTGCACATTGGCAAAATGAATAAGGTAAT
. : . : . : . : . : . :
rJMSF044I02+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF040N01+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF004A22+ GCATATGGATGANGCTATGAAAGTGGAATCAATNCTAGTGNNGA-GGGGGTGAATATATA
rJMSF018O03+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF033G22+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF042I22+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF045C06+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMFF023K04+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF010K05+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF052O24+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF002N02+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF046M17+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGACGGGGGTGAATATATA
rJMSF024F19+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMSF011J16+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
rJMFF050D10+ GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
____________________________________________________________
consensus GCATATGGATGAAGCTATGAAAGTGGAATCAATTCTAGTGTTGA-GGGGGTGAATATATA
. : . : . : . : . : . :
rJMSF044I02+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF040N01+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF004A22+ -CCGTACTGCNACATGAGAANTATAT
rJMSF018O03+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF033G22+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGTCCATATG
rJMSF042I22+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF045C06+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMFF023K04+ -CTGTACTGNTACATGAGAATTATATTGCCAATGTGTTGNTATCTTGC
rJMSF010K05+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF052O24+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF002N02+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF046M17+ TCTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF024F19+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMSF011J16+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
rJMFF050D10+ -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
____________________________________________________________
consensus -CTGTACTGCTACATGAGAATTATATTGCCAATGTGTTGCTATCTTGCTGTGT-CATATG
. : . : . : . : . : . :
rJMSF044I02+ TATATTCT
rJMSF040N01+ TATATTCTGAAAAATAC
rJMSF018O03+ TATATTCTGAAAAATA
rJMSF033G22+ TATATTCTGAAAAATA
rJMSF045C06+ TATATTCT
rJMSF010K05+ TATATTCTGAAAAATA
rJMSF052O24+ TATATTCTGAAAAATAC
rJMSF002N02+ TATATTCTGAAAAATAC
rJMSF046M17+ TATATTCTGAAAAATAC
rJMSF024F19+ TATATTCTGAAAAATAC
rJMSF011J16+ TATATTCTGAAAAATAC
rJMFF050D10+ TGTATTCTTGAAAAATACCTTTGCTCAAGCTTCTAAATAAAACTGCATTAGCCCATCCTT
____________________________________________________________
consensus TATATTCTGAAAAATACCCTTTGCTCAAGCTTCTAAATAAAACTGCATTAGCCCATCCTT