| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016K03 | Sequence | 564 | 001794 (9) | gb|AAR00230.1| | 6e-104 | flavonoid 3'-hydroxylase [Ipomoea purpurea] | 720 | 001235 (6) | gb|ABW69693.1| | 5e-72 | flavonoid 3'-hydrogenase [Ipomoea purpurea] |
| JMFF046B08 | Sequence | 524 | 001794 (9) | gb|AAR00230.1| | 5e-95 | flavonoid 3'-hydroxylase [Ipomoea purpurea] | 416 | 001235 (6) | gb|ACL26686.1| | 1e-16 | flavonoid 3'-hydroxylase [Ipomoea ternifolia] |
| JMFF049G13 | Sequence | 497 | 001794 (9) | gb|AAR00230.1| | 2e-83 | flavonoid 3'-hydroxylase [Ipomoea purpurea] | 454 | 001235 (6) | gb|ACL26686.1| | 8e-19 | flavonoid 3'-hydroxylase [Ipomoea ternifolia] |
| JMFN006P07 | Sequence | 627 | 001235 (6) | dbj|BAD00187.1| | 1e-114 | flavonoid 3'-hydroxylase [Ipomoea nil] dbj|BAD00190.1| flavonoid 3'-hydroxylase | |||||
| JMSF014G15 | Sequence | 502 | 001794 (9) | gb|AAR00230.1| | 3e-91 | flavonoid 3'-hydroxylase [Ipomoea purpurea] | 806 | 001235 (6) | gb|ABW69693.1| | 7e-96 | flavonoid 3'-hydrogenase [Ipomoea purpurea] |
| JMSF033N10 | Sequence | 597 | 001794 (9) | gb|AAR00230.1| | 3e-115 | flavonoid 3'-hydroxylase [Ipomoea purpurea] | 719 | 001235 (6) | dbj|BAD00187.1| | 4e-116 | flavonoid 3'-hydroxylase [Ipomoea nil] dbj|BAD00190.1| flavonoid 3'-hydroxylase |
This contig is upended
. : . : . : . : . : . :
rJMSF014G15+ CAATCG
____________________________________________________________
consensus CAATCG
. : . : . : . : . : . :
rJMSF014G15+ CAGAACTACTACGCAACCCCAAAAATCTTAAACCCAGCACAACAAGAGCTTGACTTAGTG
____________________________________________________________
consensus CAGAACTACTACGCAACCCCAAAAATCTTAAACCCAGCACAACAAGAGCTTGACTTAGTG
. : . : . : . : . : . :
JMFN006P07- TGACTTAACCGATCTACCTTTCCTGCAAGCA
rJMSF033N10+ GCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
rJMSF014G15+ GTGGGTCAAAATCAGCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
____________________________________________________________
consensus GTGGGTCAAAATCAGCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
. : . : . : . : . : . :
JMFN006P07- ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
rJMSF033N10+ ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
rJMSF014G15+ ATAGTGAAGGAGACCTTCAGGCTACACCCATCCCACCCCACTCTCTCTTCCAAGAATGGG
rJMFF016K03+ TCTTCCAAGAATGGG
____________________________________________________________
consensus ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
. : . : . : . : . : . :
JMFN006P07- AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMSF033N10+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMSF014G15+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMFF016K03+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
____________________________________________________________
consensus AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
. : . : . : . : . : . :
JMFN006P07- CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
rJMSF033N10+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGTACAAATCCTCTTGAGTTCAACCCACA
rJMSF014G15+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGTACAAATCCTCTTGAGTTCAACCCACA
rJMFF016K03+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
____________________________________________________________
consensus CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
. : . : . : . : . : . :
JMFN006P07- CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMSF033N10+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMSF014G15+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMFF016K03+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAGAGGGAATGACTTTGAAGT
____________________________________________________________
consensus CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
. : . : . : . : . : . :
JMFN006P07- GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMSF033N10+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMSF014G15+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMFF016K03+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTCGGATGAGTTTGGGGATAAGGATGGT
____________________________________________________________
consensus GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
. : . : . : . : . : . :
JMFN006P07- TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMSF033N10+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMSF014G15+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMFF016K03+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATT-GGATTTGGTGAATGGACAATC
rJMFF046B08+ GAATGGACAATC
rJMFF049G13+ GGATTTGGTGAATGGACAATC
____________________________________________________________
consensus TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
. : . : . : . : . : . :
JMFN006P07- TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMSF033N10+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMSF014G15+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF016K03+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF046B08+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF049G13+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
____________________________________________________________
consensus TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
. : . : . : . : . : . :
JMFN006P07- GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMSF033N10+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMSF014G15+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF016K03+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF046B08+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF049G13+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
____________________________________________________________
consensus GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
. : . : . : . : . : . :
JMFN006P07- TTGATTTTGGTAATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMSF033N10+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMSF014G15+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF016K03+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF046B08+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF049G13+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
____________________________________________________________
consensus TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
. : . : . : . : . : . :
JMFN006P07- CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGA
rJMSF033N10+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMSF014G15+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF016K03+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF046B08+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF049G13+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
____________________________________________________________
consensus CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
. : . : . : . : . : . :
rJMSF033N10+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMSF014G15+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF016K03+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF046B08+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF049G13+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
____________________________________________________________
consensus CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
. : . : . : . : . : . :
rJMSF033N10+ TCCGAAAGACCTCA
rJMSF014G15+ TCCGAAAGACCTCATGAAGA
rJMFF016K03+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
rJMFF046B08+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
rJMFF049G13+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
____________________________________________________________
consensus TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
. : . : . : . : . : . :
rJMFF016K03+ TGTAA
rJMFF046B08+ TGTAA
rJMFF049G13+ TGTAAGGTCTTCTGGTAGATGTTCTTAGTCATATTAAAAGTTCCAAACATCTTTAGTAGG
____________________________________________________________
consensus TGTAAGGTCTTCTGGTAGATGTTCTTAGTCATATTAAAAGTTCCAAACATCTTTAGTAGG